RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 NT5C1B-RDH14C9J2C7 533 aa-1.64□□□□□ -2.67
RNU4-88P-201ENST00000411220 PATL2C9JE40 543 aaKnown RBP-1.64□□□□□ -2.67
RNU4-88P-201ENST00000411220 CLIC1O00299 241 aa-1.64□□□□□ -2.67
RNU4-88P-201ENST00000411220 WDR46O15213 610 aaKnown RBP-1.64□□□□□ -2.67
RNU4-88P-201ENST00000411220 PHF2O75151 1096 aa-1.64□□□□□ -2.67
RNU4-88P-201ENST00000411220 FRAT2O75474 233 aaPredicted RBP-1.64□□□□□ -2.67
RNU4-88P-201ENST00000411220 TUSC2O75896 110 aa-1.64□□□□□ -2.67
RNU4-88P-201ENST00000411220 WISP2O76076 250 aa-1.64□□□□□ -2.67
RNU4-88P-201ENST00000411220 RAPGEF3O95398 923 aa-1.64□□□□□ -2.67
RNU4-88P-201ENST00000411220 LCA5LO95447 670 aa-1.64□□□□□ -2.67
RNU4-88P-201ENST00000411220 CBX6O95503 412 aa-1.64□□□□□ -2.67
RNU4-88P-201ENST00000411220 DUS4LO95620 317 aaKnown RBP-1.64□□□□□ -2.67
RNU4-88P-201ENST00000411220 OPN1MWP04001 364 aa-1.64□□□□□ -2.67
RNU4-88P-201ENST00000411220 NR3C1P04150 777 aa-1.64□□□□□ -2.67
RNU4-88P-201ENST00000411220 SERPING1P05155 500 aa-1.64□□□□□ -2.67
RNU4-88P-201ENST00000411220 SUPT20HL2P0C7V6 817 aa-1.64□□□□□ -2.67
RNU4-88P-201ENST00000411220 SRGAP2CP0DJJ0 459 aa-1.64□□□□□ -2.67
RNU4-88P-201ENST00000411220 OPN1MW2P0DN77 364 aa-1.64□□□□□ -2.67
RNU4-88P-201ENST00000411220 OPN1MW3P0DN78 364 aa-1.64□□□□□ -2.67
RNU4-88P-201ENST00000411220 GZMAP12544 262 aa-1.64□□□□□ -2.67
RNU4-88P-201ENST00000411220 ADRA2CP18825 462 aa-1.64□□□□□ -2.67
RNU4-88P-201ENST00000411220 TPSB2P20231 275 aa-1.64□□□□□ -2.67
RNU4-88P-201ENST00000411220 MCM3P25205 808 aa-1.64□□□□□ -2.67
RNU4-88P-201ENST00000411220 C21orf33P30042 268 aaPredicted RBP-1.64□□□□□ -2.67
RNU4-88P-201ENST00000411220 CCR7P32248 378 aa-1.64□□□□□ -2.67
RNU4-88P-201ENST00000411220 LONP1P36776 959 aaKnown RBP-1.64□□□□□ -2.67
RNU4-88P-201ENST00000411220 LMAN1P49257 510 aa-1.64□□□□□ -2.67
RNU4-88P-201ENST00000411220 FMO5P49326 533 aa-1.64□□□□□ -2.67
RNU4-88P-201ENST00000411220 ZNF45Q02386 682 aa-1.64□□□□□ -2.67
RNU4-88P-201ENST00000411220 DSG1Q02413 1049 aa-1.64□□□□□ -2.67
RNU4-88P-201ENST00000411220 PPARDQ03181 441 aa-1.64□□□□□ -2.67
RNU4-88P-201ENST00000411220 TLE2Q04725 743 aa-1.64□□□□□ -2.67
RNU4-88P-201ENST00000411220 FOXD4Q12950 439 aaPredicted RBP-1.64□□□□□ -2.67
RNU4-88P-201ENST00000411220 TARDBPQ13148 414 aaKnown RBP eCLIP-1.64□□□□□ -2.67
RNU4-88P-201ENST00000411220 MADCAM1Q13477 382 aa-1.64□□□□□ -2.67
RNU4-88P-201ENST00000411220 TPSAB1Q15661 275 aa-1.64□□□□□ -2.67
RNU4-88P-201ENST00000411220 PPP1R3AQ16821 1122 aa-1.64□□□□□ -2.67
RNU4-88P-201ENST00000411220 ISXQ2M1V0 245 aa-1.64□□□□□ -2.67
RNU4-88P-201ENST00000411220 DEFB112Q30KQ8 113 aa-1.64□□□□□ -2.67
RNU4-88P-201ENST00000411220 SV2CQ496J9 727 aa-1.64□□□□□ -2.67
RNU4-88P-201ENST00000411220 C10orf76Q5T2E6 689 aa-1.64□□□□□ -2.67
RNU4-88P-201ENST00000411220 ADAMTSL4-AS1Q5T5F5 129 aa-1.64□□□□□ -2.67
RNU4-88P-201ENST00000411220 CYB5R2Q6BCY4 276 aa-1.64□□□□□ -2.67
RNU4-88P-201ENST00000411220 TMEM211Q6ICI0 200 aa-1.64□□□□□ -2.67
RNU4-88P-201ENST00000411220 FAM173BQ6P4H8 233 aa-1.64□□□□□ -2.67
RNU4-88P-201ENST00000411220 UNC13DQ70J99 1090 aa-1.64□□□□□ -2.67
RNU4-88P-201ENST00000411220 ABHD13Q7L211 337 aa-1.64□□□□□ -2.67
RNU4-88P-201ENST00000411220 STRADAQ7RTN6 431 aa-1.64□□□□□ -2.67
RNU4-88P-201ENST00000411220 TCF24Q7RTU0 167 aa-1.64□□□□□ -2.67
RNU4-88P-201ENST00000411220 DOLPP1Q86YN1 238 aa-1.64□□□□□ -2.67
RNU4-88P-201ENST00000411220 PHYKPLQ8IUZ5 450 aa-1.64□□□□□ -2.67
RNU4-88P-201ENST00000411220 DYNAPQ8N1N2 210 aa-1.64□□□□□ -2.67
RNU4-88P-201ENST00000411220 C6orf223Q8N319 242 aa-1.64□□□□□ -2.67
RNU4-88P-201ENST00000411220 GPR137CQ8N3F9 429 aa-1.64□□□□□ -2.67
RNU4-88P-201ENST00000411220 CCDC33Q8N5R6 958 aa-1.64□□□□□ -2.67
RNU4-88P-201ENST00000411220 ARIH2OSQ8N7S6 290 aa-1.64□□□□□ -2.67
RNU4-88P-201ENST00000411220 C19orf47Q8N9M1 422 aaKnown RBP-1.64□□□□□ -2.67
RNU4-88P-201ENST00000411220 OR1P1Q8NH06 330 aa-1.64□□□□□ -2.67
RNU4-88P-201ENST00000411220 LNX1Q8TBB1 728 aaPredicted RBP-1.64□□□□□ -2.67
RNU4-88P-201ENST00000411220 MRGPRDQ8TDS7 321 aa-1.64□□□□□ -2.67
RNU4-88P-201ENST00000411220 FCAMRQ8WWV6 532 aa-1.64□□□□□ -2.67
RNU4-88P-201ENST00000411220 PATE1Q8WXA2 126 aa-1.64□□□□□ -2.67
RNU4-88P-201ENST00000411220 ZKSCAN4Q969J2 545 aaPredicted RBP-1.64□□□□□ -2.67
RNU4-88P-201ENST00000411220 SMARCD1Q96GM5 515 aa-1.64□□□□□ -2.67
RNU4-88P-201ENST00000411220 NARS2Q96I59 477 aaKnown RBP-1.64□□□□□ -2.67
RNU4-88P-201ENST00000411220 GMPPAQ96IJ6 420 aaPredicted RBP-1.64□□□□□ -2.67
RNU4-88P-201ENST00000411220 ST6GAL2Q96JF0 529 aa-1.64□□□□□ -2.67
RNU4-88P-201ENST00000411220 BMFQ96LC9 184 aa-1.64□□□□□ -2.67
RNU4-88P-201ENST00000411220 SPATA32Q96LK8 384 aa-1.64□□□□□ -2.67
RNU4-88P-201ENST00000411220 ACCSQ96QU6 501 aa-1.64□□□□□ -2.67
RNU4-88P-201ENST00000411220 PANX2Q96RD6 677 aa-1.64□□□□□ -2.67
RNU4-88P-201ENST00000411220 IL12RB2Q99665 862 aa-1.64□□□□□ -2.67
RNU4-88P-201ENST00000411220 OLFM1Q99784 485 aa-1.64□□□□□ -2.67
RNU4-88P-201ENST00000411220 C20orf144Q9BQM9 153 aa-1.64□□□□□ -2.67
RNU4-88P-201ENST00000411220 IER2Q9BTL4 223 aa-1.64□□□□□ -2.67
RNU4-88P-201ENST00000411220 TRIM9Q9C026 710 aa-1.64□□□□□ -2.67
RNU4-88P-201ENST00000411220 ZNF436Q9C0F3 470 aaPredicted RBP-1.64□□□□□ -2.67
RNU4-88P-201ENST00000411220 GZF1Q9H116 711 aaPredicted RBP-1.64□□□□□ -2.67
RNU4-88P-201ENST00000411220 UPF3AQ9H1J1 476 aaKnown RBP-1.64□□□□□ -2.67
RNU4-88P-201ENST00000411220 ZFP14Q9HCL3 533 aa-1.64□□□□□ -2.67
RNU4-88P-201ENST00000411220 FAM212BQ9NTI7 297 aaPredicted RBP-1.64□□□□□ -2.67
RNU4-88P-201ENST00000411220 EXOC1Q9NV70 894 aa-1.64□□□□□ -2.67
RNU4-88P-201ENST00000411220 ATAD3AQ9NVI7 634 aa-1.64□□□□□ -2.67
RNU4-88P-201ENST00000411220 ARL8BQ9NVJ2 186 aa-1.64□□□□□ -2.67
RNU4-88P-201ENST00000411220 KBTBD4Q9NVX7 518 aa-1.64□□□□□ -2.67
RNU4-88P-201ENST00000411220 AGO1Q9UL18 857 aaKnown RBP-1.64□□□□□ -2.67
RNU4-88P-201ENST00000411220 PLAGL1Q9UM63 463 aa-1.64□□□□□ -2.67
RNU4-88P-201ENST00000411220 DUSP12Q9UNI6 340 aa-1.64□□□□□ -2.67
RNU4-88P-201ENST00000411220 ETV7Q9Y603 341 aa-1.64□□□□□ -2.67
RNU4-88P-201ENST00000411220 LOC400499M0QZD8 3231 aa-1.64□□□□□ -2.67
RNU4-88P-201ENST00000411220 BRD4O60885 1362 aaPredicted RBP-1.64□□□□□ -2.67
RNU4-88P-201ENST00000411220 F5P12259 2224 aa-1.64□□□□□ -2.67
RNU4-88P-201ENST00000411220 POGZQ7Z3K3 1410 aa-1.65□□□□□ -2.67
RNU4-88P-201ENST00000411220 SMG6Q86US8 1419 aaKnown RBP-1.65□□□□□ -2.67
RNU4-88P-201ENST00000411220 MGAQ8IWI9 3026 aa-1.65□□□□□ -2.67
RNU4-88P-201ENST00000411220 SMCHD1A6NHR9 2005 aa-1.65□□□□□ -2.67
RNU4-88P-201ENST00000411220 A0A087WV48 116 aa-1.65□□□□□ -2.67
RNU4-88P-201ENST00000411220 TRGV4A0A0C4DH28 118 aa-1.65□□□□□ -2.67
RNU4-88P-201ENST00000411220 A0A1B0GUL7 405 aa-1.65□□□□□ -2.67
RNU4-88P-201ENST00000411220 RGSL1A5PLK6 1076 aa-1.65□□□□□ -2.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms