RNA–Protein interactions for RNA: ENST00000410517.1

RNU6-1140P-201, Transcript of RNA, U6 small nuclear 1140, pseudogene, humanhuman

BASIC

Gene RNU6-1140P, Length 106 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1140P-201ENST00000410517 CHMP1AQ9HD42 196 aaPredicted RBP2.6□□□□□ -1.99
RNU6-1140P-201ENST00000410517 LTB4R2Q9NPC1 389 aa2.6□□□□□ -1.99
RNU6-1140P-201ENST00000410517 PIH1D3Q9NQM4 214 aaKnown RBP2.6□□□□□ -1.99
RNU6-1140P-201ENST00000410517 CNGB3Q9NQW8 809 aa2.6□□□□□ -1.99
RNU6-1140P-201ENST00000410517 TXLNGQ9NUQ3 528 aa2.6□□□□□ -1.99
RNU6-1140P-201ENST00000410517 MCM9Q9NXL9 1143 aa2.6□□□□□ -1.99
RNU6-1140P-201ENST00000410517 ABI3Q9P2A4 366 aa2.6□□□□□ -1.99
RNU6-1140P-201ENST00000410517 POLKQ9UBT6 870 aa2.6□□□□□ -1.99
RNU6-1140P-201ENST00000410517 FBXL17Q9UF56 701 aa2.6□□□□□ -1.99
RNU6-1140P-201ENST00000410517 IL17BQ9UHF5 180 aa2.6□□□□□ -1.99
RNU6-1140P-201ENST00000410517 AMACRQ9UHK6 382 aa2.6□□□□□ -1.99
RNU6-1140P-201ENST00000410517 DDX25Q9UHL0 483 aaKnown RBP2.6□□□□□ -1.99
RNU6-1140P-201ENST00000410517 CDC14AQ9UNH5 594 aa2.6□□□□□ -1.99
RNU6-1140P-201ENST00000410517 NIP7Q9Y221 180 aaKnown RBP eCLIP2.6□□□□□ -1.99
RNU6-1140P-201ENST00000410517 R3HDM2Q9Y2K5 976 aaKnown RBP2.6□□□□□ -1.99
RNU6-1140P-201ENST00000410517 GRIP1Q9Y3R0 1128 aa2.6□□□□□ -1.99
RNU6-1140P-201ENST00000410517 ATP6V0A2Q9Y487 856 aa2.6□□□□□ -1.99
RNU6-1140P-201ENST00000410517 BRCA2P51587 3418 aa2.6□□□□□ -1.99
RNU6-1140P-201ENST00000410517 SZT2Q5T011 3432 aa2.6□□□□□ -1.99
RNU6-1140P-201ENST00000410517 NPC1L1Q9UHC9 1359 aa2.6□□□□□ -1.99
RNU6-1140P-201ENST00000410517 LAMA3Q16787 3333 aa2.6□□□□□ -1.99
RNU6-1140P-201ENST00000410517 TCF20Q9UGU0 1960 aaKnown RBP2.6□□□□□ -1.99
RNU6-1140P-201ENST00000410517 ZNF609O15014 1411 aa2.59□□□□□ -1.99
RNU6-1140P-201ENST00000410517 TAF1LQ8IZX4 1826 aa2.59□□□□□ -1.99
RNU6-1140P-201ENST00000410517 A0A1W2PQ09 198 aa2.59□□□□□ -1.99
RNU6-1140P-201ENST00000410517 A0A1W2PQF6 199 aa2.59□□□□□ -1.99
RNU6-1140P-201ENST00000410517 FAM170AA1A519 330 aa2.59□□□□□ -1.99
RNU6-1140P-201ENST00000410517 AGAP14A8MT82 685 aa2.59□□□□□ -1.99
RNU6-1140P-201ENST00000410517 SNAP23O00161 211 aa2.59□□□□□ -1.99
RNU6-1140P-201ENST00000410517 VCYO14598 125 aa2.59□□□□□ -1.99
RNU6-1140P-201ENST00000410517 PSMA7O14818 248 aa2.59□□□□□ -1.99
RNU6-1140P-201ENST00000410517 SMAD9O15198 467 aaKnown RBP2.59□□□□□ -1.99
RNU6-1140P-201ENST00000410517 SLC16A5O15375 505 aa2.59□□□□□ -1.99
RNU6-1140P-201ENST00000410517 TGFB1I1O43294 461 aa2.59□□□□□ -1.99
RNU6-1140P-201ENST00000410517 AHCYL1O43865 530 aa2.59□□□□□ -1.99
RNU6-1140P-201ENST00000410517 KLK8O60259 260 aa2.59□□□□□ -1.99
RNU6-1140P-201ENST00000410517 TSPAN1O60635 241 aa2.59□□□□□ -1.99
RNU6-1140P-201ENST00000410517 ATG13O75143 517 aa2.59□□□□□ -1.99
RNU6-1140P-201ENST00000410517 BEST1O76090 585 aa2.59□□□□□ -1.99
RNU6-1140P-201ENST00000410517 CAMTA2O94983 1202 aa2.59□□□□□ -1.99
RNU6-1140P-201ENST00000410517 SOX30O94993 753 aa2.59□□□□□ -1.99
RNU6-1140P-201ENST00000410517 GAS8-AS1O95177 125 aa2.59□□□□□ -1.99
RNU6-1140P-201ENST00000410517 GLUD1P00367 558 aa2.59□□□□□ -1.99
RNU6-1140P-201ENST00000410517 PSG1P11464 419 aa2.59□□□□□ -1.99
RNU6-1140P-201ENST00000410517 RARGP13631 454 aa2.59□□□□□ -1.99
RNU6-1140P-201ENST00000410517 ZNF23P17027 643 aa2.59□□□□□ -1.99
RNU6-1140P-201ENST00000410517 ANXA7P20073 488 aaKnown RBP2.59□□□□□ -1.99
RNU6-1140P-201ENST00000410517 HNRNPH1P31943 449 aaKnown RBP2.59□□□□□ -1.99
RNU6-1140P-201ENST00000410517 ACTN2P35609 894 aa2.59□□□□□ -1.99
RNU6-1140P-201ENST00000410517 USP8P40818 1118 aa2.59□□□□□ -1.99
RNU6-1140P-201ENST00000410517 IL15P40933 162 aaPredicted RBP2.59□□□□□ -1.99
RNU6-1140P-201ENST00000410517 HADHAP40939 763 aa2.59□□□□□ -1.99
RNU6-1140P-201ENST00000410517 UBA7P41226 1012 aa2.59□□□□□ -1.99
RNU6-1140P-201ENST00000410517 EPS15P42566 896 aa2.59□□□□□ -1.99
RNU6-1140P-201ENST00000410517 MSH2P43246 934 aa2.59□□□□□ -1.99
RNU6-1140P-201ENST00000410517 NR4A2P43354 598 aa2.59□□□□□ -1.99
RNU6-1140P-201ENST00000410517 GLUD2P49448 558 aa2.59□□□□□ -1.99
RNU6-1140P-201ENST00000410517 GPR143P51810 404 aa2.59□□□□□ -1.99
RNU6-1140P-201ENST00000410517 EEF1A1P68104 462 aaKnown RBP2.59□□□□□ -1.99
RNU6-1140P-201ENST00000410517 CEBPZQ03701 1054 aaKnown RBP2.59□□□□□ -1.99
RNU6-1140P-201ENST00000410517 GAGE2BQ13066 116 aa2.59□□□□□ -1.99
RNU6-1140P-201ENST00000410517 PKP1Q13835 747 aa2.59□□□□□ -1.99
RNU6-1140P-201ENST00000410517 BAATQ14032 418 aaPredicted RBP2.59□□□□□ -1.99
RNU6-1140P-201ENST00000410517 ASTE1Q2TB18 679 aaPredicted RBP2.59□□□□□ -1.99
RNU6-1140P-201ENST00000410517 GAGE2EQ4V326 116 aa2.59□□□□□ -1.99
RNU6-1140P-201ENST00000410517 TDRD12Q587J7 1177 aaKnown RBP2.59□□□□□ -1.99
RNU6-1140P-201ENST00000410517 ZNF805Q5CZA5 627 aa2.59□□□□□ -1.99
RNU6-1140P-201ENST00000410517 CXorf66Q5JRM2 361 aaPredicted RBP2.59□□□□□ -1.99
RNU6-1140P-201ENST00000410517 C9orf152Q5JTZ5 239 aa2.59□□□□□ -1.99
RNU6-1140P-201ENST00000410517 SPECC1Q5M775 1068 aa2.59□□□□□ -1.99
RNU6-1140P-201ENST00000410517 UBAP2Q5T6F2 1119 aaKnown RBP2.59□□□□□ -1.99
RNU6-1140P-201ENST00000410517 EEF1A1P5Q5VTE0 462 aa2.59□□□□□ -1.99
RNU6-1140P-201ENST00000410517 ZNF280DQ6N043 979 aa2.59□□□□□ -1.99
RNU6-1140P-201ENST00000410517 GAGE2AQ6NT46 116 aa2.59□□□□□ -1.99
RNU6-1140P-201ENST00000410517 TPRG1Q6ZUI0 275 aa2.59□□□□□ -1.99
RNU6-1140P-201ENST00000410517 PLEKHM3Q6ZWE6 761 aa2.59□□□□□ -1.99
RNU6-1140P-201ENST00000410517 ZNF367Q7RTV3 350 aa2.59□□□□□ -1.99
RNU6-1140P-201ENST00000410517 ARHGAP30Q7Z6I6 1101 aaPredicted RBP2.59□□□□□ -1.99
RNU6-1140P-201ENST00000410517 ZC3HC1Q86WB0 502 aaKnown RBP2.59□□□□□ -1.99
RNU6-1140P-201ENST00000410517 CCDC13Q8IYE1 715 aa2.59□□□□□ -1.99
RNU6-1140P-201ENST00000410517 FBXL14Q8N1E6 418 aa2.59□□□□□ -1.99
RNU6-1140P-201ENST00000410517 SPATA6LQ8N4H0 392 aa2.59□□□□□ -1.99
RNU6-1140P-201ENST00000410517 RBMXL3Q8N7X1 1067 aaKnown RBP2.59□□□□□ -1.99
RNU6-1140P-201ENST00000410517 POGLUT1Q8NBL1 392 aa2.59□□□□□ -1.99
RNU6-1140P-201ENST00000410517 RDM1Q8NG50 284 aa2.59□□□□□ -1.99
RNU6-1140P-201ENST00000410517 OR1J2Q8NGS2 313 aa2.59□□□□□ -1.99
RNU6-1140P-201ENST00000410517 OR8K5Q8NH50 307 aa2.59□□□□□ -1.99
RNU6-1140P-201ENST00000410517 WFIKKN2Q8TEU8 576 aa2.59□□□□□ -1.99
RNU6-1140P-201ENST00000410517 ADAMTS14Q8WXS8 1223 aa2.59□□□□□ -1.99
RNU6-1140P-201ENST00000410517 PABPC5Q96DU9 382 aaKnown RBP2.59□□□□□ -1.99
RNU6-1140P-201ENST00000410517 ELMOD3Q96FG2 381 aa2.59□□□□□ -1.99
RNU6-1140P-201ENST00000410517 APOLD1Q96LR9 279 aa2.59□□□□□ -1.99
RNU6-1140P-201ENST00000410517 CEP295NLQ96MC4 621 aa2.59□□□□□ -1.99
RNU6-1140P-201ENST00000410517 QRFPRQ96P65 431 aa2.59□□□□□ -1.99
RNU6-1140P-201ENST00000410517 RAB3IPQ96QF0 476 aaPredicted RBP2.59□□□□□ -1.99
RNU6-1140P-201ENST00000410517 SPAG5Q96R06 1193 aa2.59□□□□□ -1.99
RNU6-1140P-201ENST00000410517 ACOX2Q99424 681 aa2.59□□□□□ -1.99
RNU6-1140P-201ENST00000410517 TMEM204Q9BSN7 226 aa2.59□□□□□ -1.99
RNU6-1140P-201ENST00000410517 APOL6Q9BWW8 343 aa2.59□□□□□ -1.99
RNU6-1140P-201ENST00000410517 POLDIP3Q9BY77 421 aaKnown RBP2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms