RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 SEC61A1P61619 476 aaKnown RBP4.37□□□□□ -1.71
CLK1-203ENST00000409769 UBXN2AP68543 259 aa4.37□□□□□ -1.71
CLK1-203ENST00000409769 SETQ01105 290 aaPredicted RBP4.37□□□□□ -1.71
CLK1-203ENST00000409769 CNTN2Q02246 1040 aa4.37□□□□□ -1.71
CLK1-203ENST00000409769 PTP4A2Q12974 167 aa4.37□□□□□ -1.71
CLK1-203ENST00000409769 CTTNQ14247 550 aaKnown RBP4.37□□□□□ -1.71
CLK1-203ENST00000409769 MYBPC2Q14324 1141 aa4.37□□□□□ -1.71
CLK1-203ENST00000409769 KCTD2Q14681 263 aa4.37□□□□□ -1.71
CLK1-203ENST00000409769 GPR68Q15743 365 aa4.37□□□□□ -1.71
CLK1-203ENST00000409769 CALCRLQ16602 461 aa4.37□□□□□ -1.71
CLK1-203ENST00000409769 KLHL40Q2TBA0 621 aa4.37□□□□□ -1.71
CLK1-203ENST00000409769 CEP55Q53EZ4 464 aa4.37□□□□□ -1.71
CLK1-203ENST00000409769 ARHGEF16Q5VV41 709 aa4.37□□□□□ -1.71
CLK1-203ENST00000409769 NEK10Q6ZWH5 1172 aa4.37□□□□□ -1.71
CLK1-203ENST00000409769 PLA2G4DQ86XP0 818 aa4.37□□□□□ -1.71
CLK1-203ENST00000409769 PLD5Q8N7P1 536 aa4.37□□□□□ -1.71
CLK1-203ENST00000409769 NEXN-AS1Q8NBZ9 246 aa4.37□□□□□ -1.71
CLK1-203ENST00000409769 USP6NLQ92738 828 aa4.37□□□□□ -1.71
CLK1-203ENST00000409769 APOPT1Q96IL0 206 aa4.37□□□□□ -1.71
CLK1-203ENST00000409769 FAM20AQ96MK3 541 aa4.37□□□□□ -1.71
CLK1-203ENST00000409769 INPP4AQ96PE3 977 aaPredicted RBP4.37□□□□□ -1.71
CLK1-203ENST00000409769 MXRA8Q9BRK3 442 aa4.37□□□□□ -1.71
CLK1-203ENST00000409769 RNF186Q9NXI6 227 aa4.37□□□□□ -1.71
CLK1-203ENST00000409769 HSPB7Q9UBY9 170 aa4.37□□□□□ -1.71
CLK1-203ENST00000409769 ADD3Q9UEY8 706 aaKnown RBP4.37□□□□□ -1.71
CLK1-203ENST00000409769 CARD8Q9Y2G2 431 aa4.37□□□□□ -1.71
CLK1-203ENST00000409769 TMEM98Q9Y2Y6 226 aa4.37□□□□□ -1.71
CLK1-203ENST00000409769 DDX49Q9Y6V7 483 aaKnown RBP4.37□□□□□ -1.71
CLK1-203ENST00000409769 ARID2Q68CP9 1835 aa4.37□□□□□ -1.71
CLK1-203ENST00000409769 MYH11P35749 1972 aa4.36□□□□□ -1.71
CLK1-203ENST00000409769 A0A1B0GVL5 298 aa4.36□□□□□ -1.71
CLK1-203ENST00000409769 DENND3A2RUS2 1198 aa4.36□□□□□ -1.71
CLK1-203ENST00000409769 SLC15A5A6NIM6 579 aa4.36□□□□□ -1.71
CLK1-203ENST00000409769 TSPAN4O14817 238 aa4.36□□□□□ -1.71
CLK1-203ENST00000409769 LINC01565O15544 149 aa4.36□□□□□ -1.71
CLK1-203ENST00000409769 ATP9AO75110 1047 aa4.36□□□□□ -1.71
CLK1-203ENST00000409769 MBD3O95983 291 aa4.36□□□□□ -1.71
CLK1-203ENST00000409769 F9P00740 461 aa4.36□□□□□ -1.71
CLK1-203ENST00000409769 PGK2P07205 417 aa4.36□□□□□ -1.71
CLK1-203ENST00000409769 PRSS2P07478 247 aa4.36□□□□□ -1.71
CLK1-203ENST00000409769 PFKFB1P16118 471 aa4.36□□□□□ -1.71
CLK1-203ENST00000409769 CCND2P30279 289 aa4.36□□□□□ -1.71
CLK1-203ENST00000409769 LONP1P36776 959 aaKnown RBP4.36□□□□□ -1.71
CLK1-203ENST00000409769 PCYT1AP49585 367 aa4.36□□□□□ -1.71
CLK1-203ENST00000409769 NDUFA8P51970 172 aa4.36□□□□□ -1.71
CLK1-203ENST00000409769 CLDN2P57739 230 aa4.36□□□□□ -1.71
CLK1-203ENST00000409769 ECT2LQ008S8 904 aa4.36□□□□□ -1.71
CLK1-203ENST00000409769 POU3F1Q03052 451 aaPredicted RBP4.36□□□□□ -1.71
CLK1-203ENST00000409769 ITGB3BPQ13352 177 aaPredicted RBP4.36□□□□□ -1.71
CLK1-203ENST00000409769 PPP2R5CQ13362 524 aa4.36□□□□□ -1.71
CLK1-203ENST00000409769 CAPSQ13938 189 aa4.36□□□□□ -1.71
CLK1-203ENST00000409769 PDIA5Q14554 519 aa4.36□□□□□ -1.71
CLK1-203ENST00000409769 TAF11Q15544 211 aa4.36□□□□□ -1.71
CLK1-203ENST00000409769 IZUMO4Q1ZYL8 232 aa4.36□□□□□ -1.71
CLK1-203ENST00000409769 SPECC1Q5M775 1068 aa4.36□□□□□ -1.71
CLK1-203ENST00000409769 HYIQ5T013 277 aa4.36□□□□□ -1.71
CLK1-203ENST00000409769 INTS11Q5TA45 600 aaKnown RBP4.36□□□□□ -1.71
CLK1-203ENST00000409769 TXNDC8Q6A555 127 aa4.36□□□□□ -1.71
CLK1-203ENST00000409769 INO80CQ6PI98 192 aaPredicted RBP4.36□□□□□ -1.71
CLK1-203ENST00000409769 KLHL24Q6TFL4 600 aa4.36□□□□□ -1.71
CLK1-203ENST00000409769 RBM43Q6ZSC3 357 aaKnown RBP4.36□□□□□ -1.71
CLK1-203ENST00000409769 AADATQ8N5Z0 425 aa4.36□□□□□ -1.71
CLK1-203ENST00000409769 ESX1Q8N693 406 aa4.36□□□□□ -1.71
CLK1-203ENST00000409769 OR14A16Q8NHC5 309 aa4.36□□□□□ -1.71
CLK1-203ENST00000409769 LRRC15Q8TF66 581 aa4.36□□□□□ -1.71
CLK1-203ENST00000409769 ST8SIA4Q92187 359 aa4.36□□□□□ -1.71
CLK1-203ENST00000409769 TRIB2Q92519 343 aa4.36□□□□□ -1.71
CLK1-203ENST00000409769 MRPS27Q92552 414 aaKnown RBP4.36□□□□□ -1.71
CLK1-203ENST00000409769 EPSTI1Q96J88 318 aa4.36□□□□□ -1.71
CLK1-203ENST00000409769 AK8Q96MA6 479 aa4.36□□□□□ -1.71
CLK1-203ENST00000409769 TIGD1Q96MW7 591 aa4.36□□□□□ -1.71
CLK1-203ENST00000409769 RIT2Q99578 217 aa4.36□□□□□ -1.71
CLK1-203ENST00000409769 SLC25A33Q9BSK2 321 aa4.36□□□□□ -1.71
CLK1-203ENST00000409769 MMTAG2Q9BU76 263 aaKnown RBP4.36□□□□□ -1.71
CLK1-203ENST00000409769 CCSER1Q9C0I3 900 aa4.36□□□□□ -1.71
CLK1-203ENST00000409769 PLSCR4Q9NRQ2 329 aa4.36□□□□□ -1.71
CLK1-203ENST00000409769 SNTG1Q9NSN8 517 aa4.36□□□□□ -1.71
CLK1-203ENST00000409769 TMEM51Q9NW97 253 aa4.36□□□□□ -1.71
CLK1-203ENST00000409769 MPP6Q9NZW5 540 aa4.36□□□□□ -1.71
CLK1-203ENST00000409769 CRYL1Q9Y2S2 319 aa4.36□□□□□ -1.71
CLK1-203ENST00000409769 A3GALT2U3KPV4 340 aa4.36□□□□□ -1.71
CLK1-203ENST00000409769 FRMPD3Q5JV73 1810 aa4.36□□□□□ -1.71
CLK1-203ENST00000409769 NFASCO94856 1347 aa4.36□□□□□ -1.71
CLK1-203ENST00000409769 A0A0U1RQJ8 604 aa4.35□□□□□ -1.71
CLK1-203ENST00000409769 TYW5A2RUC4 315 aaKnown RBP4.35□□□□□ -1.71
CLK1-203ENST00000409769 ASB14A6NK59 587 aa4.35□□□□□ -1.71
CLK1-203ENST00000409769 HSPB2A8KAH6 182 aa4.35□□□□□ -1.71
CLK1-203ENST00000409769 PP2D1A8MPX8 630 aa4.35□□□□□ -1.71
CLK1-203ENST00000409769 KDM4EB2RXH2 506 aaPredicted RBP4.35□□□□□ -1.71
CLK1-203ENST00000409769 TNPO2O14787 897 aaKnown RBP4.35□□□□□ -1.71
CLK1-203ENST00000409769 CREB3O43889 395 aa4.35□□□□□ -1.71
CLK1-203ENST00000409769 KLK8O60259 260 aa4.35□□□□□ -1.71
CLK1-203ENST00000409769 NDUFB4O95168 129 aa4.35□□□□□ -1.71
CLK1-203ENST00000409769 SNAI1O95863 264 aaPredicted RBP4.35□□□□□ -1.71
CLK1-203ENST00000409769 GALTP07902 379 aa4.35□□□□□ -1.71
CLK1-203ENST00000409769 FMO4P31512 558 aa4.35□□□□□ -1.71
CLK1-203ENST00000409769 SYKP43405 635 aa4.35□□□□□ -1.71
CLK1-203ENST00000409769 MXI1P50539 228 aa4.35□□□□□ -1.71
CLK1-203ENST00000409769 C1QTNF8P60827 252 aa4.35□□□□□ -1.71
CLK1-203ENST00000409769 UFM1P61960 85 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms