RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 TMEM114B3SHH9 223 aa12.25□□□□□ -0.45
CHMP3-204ENST00000409727 RAD51BO15315 384 aa12.25□□□□□ -0.45
CHMP3-204ENST00000409727 ATG13O75143 517 aa12.25□□□□□ -0.45
CHMP3-204ENST00000409727 AP2A2O94973 939 aa12.25□□□□□ -0.45
CHMP3-204ENST00000409727 SIX3O95343 332 aaPredicted RBP12.25□□□□□ -0.45
CHMP3-204ENST00000409727 FTH1P02794 183 aa12.25□□□□□ -0.45
CHMP3-204ENST00000409727 MTHFD2P13995 350 aa12.25□□□□□ -0.45
CHMP3-204ENST00000409727 ZNF8P17098 575 aaPredicted RBP12.25□□□□□ -0.45
CHMP3-204ENST00000409727 TSPAN8P19075 237 aa12.25□□□□□ -0.45
CHMP3-204ENST00000409727 CDK3Q00526 305 aa12.25□□□□□ -0.45
CHMP3-204ENST00000409727 PRKCQQ04759 706 aa12.25□□□□□ -0.45
CHMP3-204ENST00000409727 ZBTB16Q05516 673 aa12.25□□□□□ -0.45
CHMP3-204ENST00000409727 ASPHQ12797 758 aa12.25□□□□□ -0.45
CHMP3-204ENST00000409727 GTF2H3Q13889 308 aa12.25□□□□□ -0.45
CHMP3-204ENST00000409727 ARL13AQ5H913 290 aaPredicted RBP12.25□□□□□ -0.45
CHMP3-204ENST00000409727 KIAA1161Q6NSJ0 714 aa12.25□□□□□ -0.45
CHMP3-204ENST00000409727 KBTBD6Q86V97 674 aa12.25□□□□□ -0.45
CHMP3-204ENST00000409727 SLC22A9Q8IVM8 553 aa12.25□□□□□ -0.45
CHMP3-204ENST00000409727 FBXO39Q8N4B4 442 aa12.25□□□□□ -0.45
CHMP3-204ENST00000409727 LILRA3Q8N6C8 439 aaPredicted RBP12.25□□□□□ -0.45
CHMP3-204ENST00000409727 ZNF781Q8N8C0 355 aa12.25□□□□□ -0.45
CHMP3-204ENST00000409727 OR6Y1Q8NGX8 325 aa12.25□□□□□ -0.45
CHMP3-204ENST00000409727 CCDC126Q96EE4 140 aa12.25□□□□□ -0.45
CHMP3-204ENST00000409727 HHIPQ96QV1 700 aa12.25□□□□□ -0.45
CHMP3-204ENST00000409727 SLC17A9Q9BYT1 436 aa12.25□□□□□ -0.45
CHMP3-204ENST00000409727 ZCCHC2Q9C0B9 1178 aaKnown RBP12.25□□□□□ -0.45
CHMP3-204ENST00000409727 TRIM39Q9HCM9 518 aa12.25□□□□□ -0.45
CHMP3-204ENST00000409727 POLMQ9NP87 494 aaPredicted RBP12.25□□□□□ -0.45
CHMP3-204ENST00000409727 CD274Q9NZQ7 290 aa12.25□□□□□ -0.45
CHMP3-204ENST00000409727 FZD4Q9ULV1 537 aa12.25□□□□□ -0.45
CHMP3-204ENST00000409727 DOCK9Q9BZ29 2069 aa12.24□□□□□ -0.45
CHMP3-204ENST00000409727 SYCE1LA8MT33 242 aa12.24□□□□□ -0.45
CHMP3-204ENST00000409727 EBAG9O00559 213 aa12.24□□□□□ -0.45
CHMP3-204ENST00000409727 SNX2O60749 519 aa12.24□□□□□ -0.45
CHMP3-204ENST00000409727 SUPT7LO94864 414 aa12.24□□□□□ -0.45
CHMP3-204ENST00000409727 GUCA1CO95843 209 aa12.24□□□□□ -0.45
CHMP3-204ENST00000409727 MPSTP25325 297 aa12.24□□□□□ -0.45
CHMP3-204ENST00000409727 PREPP48147 710 aa12.24□□□□□ -0.45
CHMP3-204ENST00000409727 PRLHRP49683 370 aa12.24□□□□□ -0.45
CHMP3-204ENST00000409727 HK3P52790 923 aa12.24□□□□□ -0.45
CHMP3-204ENST00000409727 DNAJB13P59910 316 aa12.24□□□□□ -0.45
CHMP3-204ENST00000409727 RCN2Q14257 317 aa12.24□□□□□ -0.45
CHMP3-204ENST00000409727 SYTL3Q4VX76 610 aa12.24□□□□□ -0.45
CHMP3-204ENST00000409727 TMEM259Q4ZIN3 620 aa12.24□□□□□ -0.45
CHMP3-204ENST00000409727 USP30Q70CQ3 517 aa12.24□□□□□ -0.45
CHMP3-204ENST00000409727 RAB44Q7Z6P3 723 aaPredicted RBP12.24□□□□□ -0.45
CHMP3-204ENST00000409727 HORMAD1Q86X24 394 aa12.24□□□□□ -0.45
CHMP3-204ENST00000409727 ZNF687Q8N1G0 1237 aa12.24□□□□□ -0.45
CHMP3-204ENST00000409727 TP53I13Q8NBR0 393 aaPredicted RBP12.24□□□□□ -0.45
CHMP3-204ENST00000409727 ESAMQ96AP7 390 aa12.24□□□□□ -0.45
CHMP3-204ENST00000409727 FAM131CQ96AQ9 280 aa12.24□□□□□ -0.45
CHMP3-204ENST00000409727 C1QTNF2Q9BXJ5 285 aa12.24□□□□□ -0.45
CHMP3-204ENST00000409727 DRC3Q9H069 523 aa12.24□□□□□ -0.45
CHMP3-204ENST00000409727 LTB4R2Q9NPC1 389 aa12.24□□□□□ -0.45
CHMP3-204ENST00000409727 KLHL14Q9P2G3 628 aa12.24□□□□□ -0.45
CHMP3-204ENST00000409727 EBF1Q9UH73 591 aa12.24□□□□□ -0.45
CHMP3-204ENST00000409727 MRPS17Q9Y2R5 130 aaKnown RBP12.24□□□□□ -0.45
CHMP3-204ENST00000409727 COL6A3P12111 3177 aa12.23□□□□□ -0.45
CHMP3-204ENST00000409727 KANSL1LA0AUZ9 987 aa12.23□□□□□ -0.45
CHMP3-204ENST00000409727 IMPDH1P20839 514 aa12.23□□□□□ -0.45
CHMP3-204ENST00000409727 EEF1DP29692 281 aaKnown RBP12.23□□□□□ -0.45
CHMP3-204ENST00000409727 AGTR2P50052 363 aa12.23□□□□□ -0.45
CHMP3-204ENST00000409727 DGKEP52429 567 aa12.23□□□□□ -0.45
CHMP3-204ENST00000409727 LRRC32Q14392 662 aa12.23□□□□□ -0.45
CHMP3-204ENST00000409727 GAS6Q14393 721 aa12.23□□□□□ -0.45
CHMP3-204ENST00000409727 TGFBIQ15582 683 aa12.23□□□□□ -0.45
CHMP3-204ENST00000409727 PHKG1Q16816 387 aa12.23□□□□□ -0.45
CHMP3-204ENST00000409727 SBSNQ6UWP8 590 aa12.23□□□□□ -0.45
CHMP3-204ENST00000409727 ADAMTSL4Q6UY14 1074 aa12.23□□□□□ -0.45
CHMP3-204ENST00000409727 CYHR1Q6ZMK1 362 aa12.23□□□□□ -0.45
CHMP3-204ENST00000409727 C10orf82Q8WW14 230 aa12.23□□□□□ -0.45
CHMP3-204ENST00000409727 PDLIM5Q96HC4 596 aaKnown RBP12.23□□□□□ -0.45
CHMP3-204ENST00000409727 RMDN2Q96LZ7 410 aa12.23□□□□□ -0.45
CHMP3-204ENST00000409727 CCM2Q9BSQ5 444 aa12.23□□□□□ -0.45
CHMP3-204ENST00000409727 FAM126AQ9BYI3 521 aaPredicted RBP12.23□□□□□ -0.45
CHMP3-204ENST00000409727 BTBD1Q9H0C5 482 aa12.23□□□□□ -0.45
CHMP3-204ENST00000409727 WDR26Q9H7D7 661 aa12.23□□□□□ -0.45
CHMP3-204ENST00000409727 PREBQ9HCU5 417 aa12.23□□□□□ -0.45
CHMP3-204ENST00000409727 WNT16Q9UBV4 365 aa12.23□□□□□ -0.45
CHMP3-204ENST00000409727 ARL2BPQ9Y2Y0 163 aa12.23□□□□□ -0.45
CHMP3-204ENST00000409727 FIS1Q9Y3D6 152 aa12.23□□□□□ -0.45
CHMP3-204ENST00000409727 PCYT1BQ9Y5K3 369 aaPredicted RBP12.23□□□□□ -0.45
CHMP3-204ENST00000409727 QSOX1O00391 747 aa12.23□□□□□ -0.45
CHMP3-204ENST00000409727 CBSLP0DN79 551 aa12.23□□□□□ -0.45
CHMP3-204ENST00000409727 CBSP35520 551 aa12.23□□□□□ -0.45
CHMP3-204ENST00000409727 AQP5P55064 265 aa12.23□□□□□ -0.45
CHMP3-204ENST00000409727 CDH13P55290 713 aa12.23□□□□□ -0.45
CHMP3-204ENST00000409727 HERVK_113P63132 956 aa12.23□□□□□ -0.45
CHMP3-204ENST00000409727 IFT88Q13099 833 aa12.23□□□□□ -0.45
CHMP3-204ENST00000409727 C18orf21Q32NC0 220 aaPredicted RBP12.23□□□□□ -0.45
CHMP3-204ENST00000409727 ZNF678Q5SXM1 525 aa12.23□□□□□ -0.45
CHMP3-204ENST00000409727 FAM219BQ5XKK7 198 aa12.23□□□□□ -0.45
CHMP3-204ENST00000409727 SYT13Q7L8C5 426 aa12.23□□□□□ -0.45
CHMP3-204ENST00000409727 ADAMTSL2Q86TH1 951 aa12.23□□□□□ -0.45
CHMP3-204ENST00000409727 NLRP8Q86W28 1048 aa12.23□□□□□ -0.45
CHMP3-204ENST00000409727 LSMEM2Q8N112 164 aa12.23□□□□□ -0.45
CHMP3-204ENST00000409727 TSTD1Q8NFU3 115 aa12.23□□□□□ -0.45
CHMP3-204ENST00000409727 CFAP61Q8NHU2 1237 aa12.23□□□□□ -0.45
CHMP3-204ENST00000409727 PIWIL2Q8TC59 973 aaKnown RBP12.23□□□□□ -0.45
CHMP3-204ENST00000409727 ASZ1Q8WWH4 475 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms