RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 VPS37BQ9H9H4 285 aa12.58□□□□□ -0.4
CHRNA1-205ENST00000409542 SSU72Q9NP77 194 aaKnown RBP12.58□□□□□ -0.4
CHRNA1-205ENST00000409542 ANAPC2Q9UJX6 822 aa12.58□□□□□ -0.4
CHRNA1-205ENST00000409542 PILRAQ9UKJ1 303 aa12.58□□□□□ -0.4
CHRNA1-205ENST00000409542 TRBV23OR9-2A0A075B6M9 112 aa12.57□□□□□ -0.4
CHRNA1-205ENST00000409542 A0A0U1RQS6 177 aa12.57□□□□□ -0.4
CHRNA1-205ENST00000409542 BLACEA4D250 179 aa12.57□□□□□ -0.4
CHRNA1-205ENST00000409542 EFCAB7A8K855 629 aa12.57□□□□□ -0.4
CHRNA1-205ENST00000409542 ZNF891A8MT65 544 aaPredicted RBP12.57□□□□□ -0.4
CHRNA1-205ENST00000409542 TCP11X1B4DZS4 312 aa12.57□□□□□ -0.4
CHRNA1-205ENST00000409542 K7EM74 188 aa12.57□□□□□ -0.4
CHRNA1-205ENST00000409542 RBP3P10745 1247 aa12.57□□□□□ -0.4
CHRNA1-205ENST00000409542 SERPINA4P29622 427 aa12.57□□□□□ -0.4
CHRNA1-205ENST00000409542 GPR3P46089 330 aa12.57□□□□□ -0.4
CHRNA1-205ENST00000409542 CDH6P55285 790 aa12.57□□□□□ -0.4
CHRNA1-205ENST00000409542 BCL2L1Q07817 233 aa12.57□□□□□ -0.4
CHRNA1-205ENST00000409542 CNGA3Q16281 694 aa12.57□□□□□ -0.4
CHRNA1-205ENST00000409542 CA9Q16790 459 aa12.57□□□□□ -0.4
CHRNA1-205ENST00000409542 KLHL38Q2WGJ6 581 aa12.57□□□□□ -0.4
CHRNA1-205ENST00000409542 ANKRD22Q5VYY1 191 aa12.57□□□□□ -0.4
CHRNA1-205ENST00000409542 HEATR4Q86WZ0 1026 aa12.57□□□□□ -0.4
CHRNA1-205ENST00000409542 FAM129CQ86XR2 697 aa12.57□□□□□ -0.4
CHRNA1-205ENST00000409542 TP53INP2Q8IXH6 220 aa12.57□□□□□ -0.4
CHRNA1-205ENST00000409542 CBARPQ8N350 705 aaPredicted RBP12.57□□□□□ -0.4
CHRNA1-205ENST00000409542 ANKRD42Q8N9B4 389 aa12.57□□□□□ -0.4
CHRNA1-205ENST00000409542 AGBL5Q8NDL9 886 aa12.57□□□□□ -0.4
CHRNA1-205ENST00000409542 C9orf43Q8TAL5 461 aaPredicted RBP12.57□□□□□ -0.4
CHRNA1-205ENST00000409542 MGARPQ8TDB4 240 aa12.57□□□□□ -0.4
CHRNA1-205ENST00000409542 RTP4Q96DX8 246 aa12.57□□□□□ -0.4
CHRNA1-205ENST00000409542 RNF31Q96EP0 1072 aa12.57□□□□□ -0.4
CHRNA1-205ENST00000409542 SLC45A3Q96JT2 553 aa12.57□□□□□ -0.4
CHRNA1-205ENST00000409542 RNF157Q96PX1 679 aa12.57□□□□□ -0.4
CHRNA1-205ENST00000409542 ELAC2Q9BQ52 826 aaKnown RBP12.57□□□□□ -0.4
CHRNA1-205ENST00000409542 TEX101Q9BY14 249 aa12.57□□□□□ -0.4
CHRNA1-205ENST00000409542 GSDMCQ9BYG8 508 aa12.57□□□□□ -0.4
CHRNA1-205ENST00000409542 ATP13A3Q9H7F0 1226 aa12.57□□□□□ -0.4
CHRNA1-205ENST00000409542 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.57□□□□□ -0.4
CHRNA1-205ENST00000409542 PSMC3IPQ9P2W1 217 aaPredicted RBP12.57□□□□□ -0.4
CHRNA1-205ENST00000409542 SAE1Q9UBE0 346 aaPredicted RBP12.57□□□□□ -0.4
CHRNA1-205ENST00000409542 DNAJC8O75937 253 aaPredicted RBP12.56□□□□□ -0.4
CHRNA1-205ENST00000409542 STX2P32856 288 aa12.56□□□□□ -0.4
CHRNA1-205ENST00000409542 CSTF2P33240 577 aaKnown RBP eCLIP12.56□□□□□ -0.4
CHRNA1-205ENST00000409542 ETV3P41162 512 aa12.56□□□□□ -0.4
CHRNA1-205ENST00000409542 NDST2P52849 883 aa12.56□□□□□ -0.4
CHRNA1-205ENST00000409542 GPX6P59796 221 aa12.56□□□□□ -0.4
CHRNA1-205ENST00000409542 ILF3Q12906 894 aaKnown RBP eCLIP12.56□□□□□ -0.4
CHRNA1-205ENST00000409542 SQSTM1Q13501 440 aa12.56□□□□□ -0.4
CHRNA1-205ENST00000409542 TRA2AQ13595 282 aaKnown RBP eCLIP12.56□□□□□ -0.4
CHRNA1-205ENST00000409542 KRT81Q14533 505 aa12.56□□□□□ -0.4
CHRNA1-205ENST00000409542 CLPPQ16740 277 aaPredicted RBP12.56□□□□□ -0.4
CHRNA1-205ENST00000409542 RGS9BPQ6ZS82 235 aa12.56□□□□□ -0.4
CHRNA1-205ENST00000409542 RFLNAQ6ZTI6 216 aa12.56□□□□□ -0.4
CHRNA1-205ENST00000409542 HSD11B1LQ7Z5J1 315 aa12.56□□□□□ -0.4
CHRNA1-205ENST00000409542 ARHGAP12Q8IWW6 846 aa12.56□□□□□ -0.4
CHRNA1-205ENST00000409542 NRSN1Q8IZ57 195 aa12.56□□□□□ -0.4
CHRNA1-205ENST00000409542 DENND1AQ8TEH3 1009 aa12.56□□□□□ -0.4
CHRNA1-205ENST00000409542 PYROXD1Q8WU10 500 aa12.56□□□□□ -0.4
CHRNA1-205ENST00000409542 FAF2Q96CS3 445 aa12.56□□□□□ -0.4
CHRNA1-205ENST00000409542 NUS1Q96E22 293 aa12.56□□□□□ -0.4
CHRNA1-205ENST00000409542 DHRS4Q9BTZ2 278 aa12.56□□□□□ -0.4
CHRNA1-205ENST00000409542 TRABDQ9H4I3 376 aa12.56□□□□□ -0.4
CHRNA1-205ENST00000409542 APMAPQ9HDC9 416 aa12.56□□□□□ -0.4
CHRNA1-205ENST00000409542 TRNAU1APQ9NX07 287 aaKnown RBP12.56□□□□□ -0.4
CHRNA1-205ENST00000409542 TBK1Q9UHD2 729 aa12.56□□□□□ -0.4
CHRNA1-205ENST00000409542 A8MU76 341 aa12.55□□□□□ -0.4
CHRNA1-205ENST00000409542 H0YHG0 523 aa12.55□□□□□ -0.4
CHRNA1-205ENST00000409542 MTSS1O43312 755 aa12.55□□□□□ -0.4
CHRNA1-205ENST00000409542 ABCB7O75027 752 aa12.55□□□□□ -0.4
CHRNA1-205ENST00000409542 TMEM63AO94886 807 aa12.55□□□□□ -0.4
CHRNA1-205ENST00000409542 SUN1O94901 812 aa12.55□□□□□ -0.4
CHRNA1-205ENST00000409542 EML2O95834 649 aa12.55□□□□□ -0.4
CHRNA1-205ENST00000409542 SCTRP47872 440 aa12.55□□□□□ -0.4
CHRNA1-205ENST00000409542 SCNN1BP51168 640 aa12.55□□□□□ -0.4
CHRNA1-205ENST00000409542 TPI1P60174 286 aa12.55□□□□□ -0.4
CHRNA1-205ENST00000409542 CDK3Q00526 305 aa12.55□□□□□ -0.4
CHRNA1-205ENST00000409542 CDC20Q12834 499 aa12.55□□□□□ -0.4
CHRNA1-205ENST00000409542 MMRN1Q13201 1228 aa12.55□□□□□ -0.4
CHRNA1-205ENST00000409542 DEFB109BQ30KR1 87 aa12.55□□□□□ -0.4
CHRNA1-205ENST00000409542 C4orf17Q53FE4 359 aa12.55□□□□□ -0.4
CHRNA1-205ENST00000409542 SNAP47Q5SQN1 464 aa12.55□□□□□ -0.4
CHRNA1-205ENST00000409542 FNBP1LQ5T0N5 605 aa12.55□□□□□ -0.4
CHRNA1-205ENST00000409542 DCAF12Q5T6F0 453 aa12.55□□□□□ -0.4
CHRNA1-205ENST00000409542 SLC9A4Q6AI14 798 aa12.55□□□□□ -0.4
CHRNA1-205ENST00000409542 TMEM71Q6P5X7 295 aa12.55□□□□□ -0.4
CHRNA1-205ENST00000409542 DARS2Q6PI48 645 aaKnown RBP12.55□□□□□ -0.4
CHRNA1-205ENST00000409542 C4orf22Q6V702 233 aa12.55□□□□□ -0.4
CHRNA1-205ENST00000409542 PDIK1LQ8N165 341 aa12.55□□□□□ -0.4
CHRNA1-205ENST00000409542 FAM26EQ8N5C1 309 aa12.55□□□□□ -0.4
CHRNA1-205ENST00000409542 FAM71DQ8N9W8 422 aa12.55□□□□□ -0.4
CHRNA1-205ENST00000409542 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.55□□□□□ -0.4
CHRNA1-205ENST00000409542 MIB2Q96AX9 1013 aa12.55□□□□□ -0.4
CHRNA1-205ENST00000409542 CATSPER2Q96P56 530 aa12.55□□□□□ -0.4
CHRNA1-205ENST00000409542 ZNF670Q9BS34 389 aa12.55□□□□□ -0.4
CHRNA1-205ENST00000409542 ACSS3Q9H6R3 686 aa12.55□□□□□ -0.4
CHRNA1-205ENST00000409542 PCDH18Q9HCL0 1135 aa12.55□□□□□ -0.4
CHRNA1-205ENST00000409542 PHPT1Q9NRX4 125 aaPredicted RBP12.55□□□□□ -0.4
CHRNA1-205ENST00000409542 KCNK4Q9NYG8 393 aa12.55□□□□□ -0.4
CHRNA1-205ENST00000409542 PAK5Q9P286 719 aa12.55□□□□□ -0.4
CHRNA1-205ENST00000409542 PDP2Q9P2J9 529 aa12.55□□□□□ -0.4
CHRNA1-205ENST00000409542 TMEM98Q9Y2Y6 226 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms