RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 RECQLP46063 649 aaPredicted RBP13.21□□□□□ -0.29
COL6A2-204ENST00000409416 POLD2P49005 469 aa13.21□□□□□ -0.29
COL6A2-204ENST00000409416 SERINC3Q13530 473 aa13.21□□□□□ -0.29
COL6A2-204ENST00000409416 KCTD21Q4G0X4 260 aa13.21□□□□□ -0.29
COL6A2-204ENST00000409416 MSANTD2Q6P1R3 559 aa13.21□□□□□ -0.29
COL6A2-204ENST00000409416 FKBP9P1Q75LS8 142 aa13.21□□□□□ -0.29
COL6A2-204ENST00000409416 DNAJB7Q7Z6W7 309 aaPredicted RBP13.21□□□□□ -0.29
COL6A2-204ENST00000409416 STAG3L4Q8TBR4 150 aa13.21□□□□□ -0.29
COL6A2-204ENST00000409416 ITCHQ96J02 903 aa13.21□□□□□ -0.29
COL6A2-204ENST00000409416 TEX37Q96LM6 180 aa13.21□□□□□ -0.29
COL6A2-204ENST00000409416 PAIP1Q9H074 479 aaKnown RBP13.21□□□□□ -0.29
COL6A2-204ENST00000409416 CLEC4EQ9ULY5 219 aa13.21□□□□□ -0.29
COL6A2-204ENST00000409416 TMCO1Q9UM00 188 aa13.21□□□□□ -0.29
COL6A2-204ENST00000409416 TCRBV3S1A0A5B6 114 aa13.21□□□□□ -0.3
COL6A2-204ENST00000409416 PLK4O00444 970 aa13.21□□□□□ -0.3
COL6A2-204ENST00000409416 LSM1O15116 133 aaKnown RBP13.21□□□□□ -0.3
COL6A2-204ENST00000409416 NDST3O95803 873 aa13.21□□□□□ -0.3
COL6A2-204ENST00000409416 SELPP16109 830 aa13.21□□□□□ -0.3
COL6A2-204ENST00000409416 CTSOP43234 321 aaPredicted RBP13.21□□□□□ -0.3
COL6A2-204ENST00000409416 MERTKQ12866 999 aa13.21□□□□□ -0.3
COL6A2-204ENST00000409416 CBX3Q13185 183 aa13.21□□□□□ -0.3
COL6A2-204ENST00000409416 APOFQ13790 326 aa13.21□□□□□ -0.3
COL6A2-204ENST00000409416 TRIP4Q15650 581 aaPredicted RBP13.21□□□□□ -0.3
COL6A2-204ENST00000409416 PLPP4Q5VZY2 271 aa13.21□□□□□ -0.3
COL6A2-204ENST00000409416 GALNT5Q7Z7M9 940 aa13.21□□□□□ -0.3
COL6A2-204ENST00000409416 ADGRG2Q8IZP9 1017 aa13.21□□□□□ -0.3
COL6A2-204ENST00000409416 CCDC138Q96M89 665 aa13.21□□□□□ -0.3
COL6A2-204ENST00000409416 MFSD1Q9H3U5 465 aa13.21□□□□□ -0.3
COL6A2-204ENST00000409416 LTB4R2Q9NPC1 389 aa13.21□□□□□ -0.3
COL6A2-204ENST00000409416 HCFC1R1Q9NWW0 138 aa13.21□□□□□ -0.3
COL6A2-204ENST00000409416 NEU3Q9UQ49 428 aa13.21□□□□□ -0.3
COL6A2-204ENST00000409416 ARVCFO00192 962 aa13.2□□□□□ -0.3
COL6A2-204ENST00000409416 KPNA3O00505 521 aaPredicted RBP13.2□□□□□ -0.3
COL6A2-204ENST00000409416 B4GAT1O43505 415 aa13.2□□□□□ -0.3
COL6A2-204ENST00000409416 RFPL2O75678 378 aa13.2□□□□□ -0.3
COL6A2-204ENST00000409416 SNAP29O95721 258 aa13.2□□□□□ -0.3
COL6A2-204ENST00000409416 PKMP14618 531 aaKnown RBP13.2□□□□□ -0.3
COL6A2-204ENST00000409416 HOXD10P28358 340 aa13.2□□□□□ -0.3
COL6A2-204ENST00000409416 GSK3BP49841 420 aa13.2□□□□□ -0.3
COL6A2-204ENST00000409416 FKBP1BP68106 108 aa13.2□□□□□ -0.3
COL6A2-204ENST00000409416 ZXDBP98169 803 aa13.2□□□□□ -0.3
COL6A2-204ENST00000409416 BCL2L1Q07817 233 aa13.2□□□□□ -0.3
COL6A2-204ENST00000409416 TRAP1Q12931 704 aaKnown RBP13.2□□□□□ -0.3
COL6A2-204ENST00000409416 STARD3Q14849 445 aa13.2□□□□□ -0.3
COL6A2-204ENST00000409416 ADRM1Q16186 407 aa13.2□□□□□ -0.3
COL6A2-204ENST00000409416 CYP27C1Q4G0S4 372 aa13.2□□□□□ -0.3
COL6A2-204ENST00000409416 CYHR1Q6ZMK1 362 aa13.2□□□□□ -0.3
COL6A2-204ENST00000409416 DHRSXQ8N5I4 330 aa13.2□□□□□ -0.3
COL6A2-204ENST00000409416 UBXN10Q96LJ8 280 aa13.2□□□□□ -0.3
COL6A2-204ENST00000409416 DGCR6LQ9BY27 220 aa13.2□□□□□ -0.3
COL6A2-204ENST00000409416 TUBB1Q9H4B7 451 aa13.2□□□□□ -0.3
COL6A2-204ENST00000409416 CREBZFQ9NS37 354 aa13.2□□□□□ -0.3
COL6A2-204ENST00000409416 ABCB8Q9NUT2 735 aa13.2□□□□□ -0.3
COL6A2-204ENST00000409416 HSFX1Q9UBD0 423 aa13.2□□□□□ -0.3
COL6A2-204ENST00000409416 A0A087WXM4 84 aa13.2□□□□□ -0.3
COL6A2-204ENST00000409416 PFDN6O15212 129 aa13.2□□□□□ -0.3
COL6A2-204ENST00000409416 LRG1P02750 347 aa13.2□□□□□ -0.3
COL6A2-204ENST00000409416 ZNF37AP17032 561 aaPredicted RBP13.2□□□□□ -0.3
COL6A2-204ENST00000409416 NTHL1P78549 312 aa13.2□□□□□ -0.3
COL6A2-204ENST00000409416 CD300LGQ6UXG3 332 aa13.2□□□□□ -0.3
COL6A2-204ENST00000409416 SERPINA9Q86WD7 417 aa13.2□□□□□ -0.3
COL6A2-204ENST00000409416 CARM1Q86X55 608 aa13.2□□□□□ -0.3
COL6A2-204ENST00000409416 TMEM126BQ8IUX1 230 aa13.2□□□□□ -0.3
COL6A2-204ENST00000409416 HS3ST5Q8IZT8 346 aa13.2□□□□□ -0.3
COL6A2-204ENST00000409416 FAM162AQ96A26 154 aa13.2□□□□□ -0.3
COL6A2-204ENST00000409416 PPP1R2P1Q96PQ5 205 aa13.2□□□□□ -0.3
COL6A2-204ENST00000409416 TRMOQ9BU70 441 aa13.2□□□□□ -0.3
COL6A2-204ENST00000409416 WRAP53Q9BUR4 548 aaKnown RBP13.2□□□□□ -0.3
COL6A2-204ENST00000409416 RBM38Q9H0Z9 239 aaKnown RBP13.2□□□□□ -0.3
COL6A2-204ENST00000409416 IPPKQ9H8X2 491 aa13.2□□□□□ -0.3
COL6A2-204ENST00000409416 CD300AQ9UGN4 299 aa13.2□□□□□ -0.3
COL6A2-204ENST00000409416 SLC8A2Q9UPR5 921 aa13.2□□□□□ -0.3
COL6A2-204ENST00000409416 TNFRSF10BO14763 440 aa13.2□□□□□ -0.3
COL6A2-204ENST00000409416 LDB2O43679 373 aa13.2□□□□□ -0.3
COL6A2-204ENST00000409416 GJA8P48165 433 aa13.2□□□□□ -0.3
COL6A2-204ENST00000409416 LRRC74AQ0VAA2 488 aa13.2□□□□□ -0.3
COL6A2-204ENST00000409416 GTDC1Q4AE62 458 aa13.2□□□□□ -0.3
COL6A2-204ENST00000409416 PAGE3Q5JUK9 113 aa13.2□□□□□ -0.3
COL6A2-204ENST00000409416 XKR5Q6UX68 686 aa13.2□□□□□ -0.3
COL6A2-204ENST00000409416 TMEM26Q6ZUK4 368 aa13.2□□□□□ -0.3
COL6A2-204ENST00000409416 GANCQ8TET4 914 aa13.2□□□□□ -0.3
COL6A2-204ENST00000409416 ANAPC2Q9UJX6 822 aa13.2□□□□□ -0.3
COL6A2-204ENST00000409416 A0A0J9YVX5 310 aa13.19□□□□□ -0.3
COL6A2-204ENST00000409416 LDLRP01130 860 aa13.19□□□□□ -0.3
COL6A2-204ENST00000409416 ALBP02768 609 aa13.19□□□□□ -0.3
COL6A2-204ENST00000409416 SLC6A2P23975 617 aa13.19□□□□□ -0.3
COL6A2-204ENST00000409416 ALDH4A1P30038 563 aa13.19□□□□□ -0.3
COL6A2-204ENST00000409416 PWP1Q13610 501 aa13.19□□□□□ -0.3
COL6A2-204ENST00000409416 C12orf43Q96C57 262 aaKnown RBP13.19□□□□□ -0.3
COL6A2-204ENST00000409416 MAGED4Q96JG8 741 aa13.19□□□□□ -0.3
COL6A2-204ENST00000409416 MTERF1Q99551 399 aaKnown RBP13.19□□□□□ -0.3
COL6A2-204ENST00000409416 C9orf16Q9BUW7 83 aa13.19□□□□□ -0.3
COL6A2-204ENST00000409416 ADGRE3Q9BY15 652 aa13.19□□□□□ -0.3
COL6A2-204ENST00000409416 CXorf21Q9HAI6 301 aa13.19□□□□□ -0.3
COL6A2-204ENST00000409416 DUS2Q9NX74 493 aaKnown RBP13.19□□□□□ -0.3
COL6A2-204ENST00000409416 SPEGQ15772 3267 aa13.19□□□□□ -0.3
COL6A2-204ENST00000409416 SEC16AO15027 2179 aa13.19□□□□□ -0.3
COL6A2-204ENST00000409416 A0A1W2PPW3 197 aa13.19□□□□□ -0.3
COL6A2-204ENST00000409416 CACNG3O60359 315 aa13.19□□□□□ -0.3
COL6A2-204ENST00000409416 USP41Q3LFD5 358 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms