RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 POLEQ07864 2286 aa16.26■□□□□ 0.19
CHMP3-203ENST00000409225 PRSS44E7EML9 344 aa16.26■□□□□ 0.19
CHMP3-203ENST00000409225 ZG16O60844 167 aa16.26■□□□□ 0.19
CHMP3-203ENST00000409225 BPIP17213 487 aa16.26■□□□□ 0.19
CHMP3-203ENST00000409225 KPNA2P52292 529 aaKnown RBP16.26■□□□□ 0.19
CHMP3-203ENST00000409225 TMEM115Q12893 351 aaPredicted RBP16.26■□□□□ 0.19
CHMP3-203ENST00000409225 NCF4Q15080 339 aa16.26■□□□□ 0.19
CHMP3-203ENST00000409225 LLGL1Q15334 1064 aa16.26■□□□□ 0.19
CHMP3-203ENST00000409225 NCBP2-AS2Q69YL0 99 aa16.26■□□□□ 0.19
CHMP3-203ENST00000409225 ARMC6Q6NXE6 501 aa16.26■□□□□ 0.19
CHMP3-203ENST00000409225 FAM83HQ6ZRV2 1179 aaPredicted RBP16.26■□□□□ 0.19
CHMP3-203ENST00000409225 TMC3Q7Z5M5 1100 aa16.26■□□□□ 0.19
CHMP3-203ENST00000409225 CUZD1Q86UP6 607 aa16.26■□□□□ 0.19
CHMP3-203ENST00000409225 OOSP2Q86WS3 158 aa16.26■□□□□ 0.19
CHMP3-203ENST00000409225 BARD1Q99728 777 aaKnown RBP16.26■□□□□ 0.19
CHMP3-203ENST00000409225 GPR63Q9BZJ6 419 aa16.26■□□□□ 0.19
CHMP3-203ENST00000409225 ACTR5Q9H9F9 607 aaPredicted RBP16.26■□□□□ 0.19
CHMP3-203ENST00000409225 MRPL47Q9HD33 250 aaKnown RBP16.26■□□□□ 0.19
CHMP3-203ENST00000409225 AGPAT4Q9NRZ5 378 aa16.26■□□□□ 0.19
CHMP3-203ENST00000409225 TMEM63CQ9P1W3 806 aa16.26■□□□□ 0.19
CHMP3-203ENST00000409225 NFKBIL1Q9UBC1 381 aaPredicted RBP16.26■□□□□ 0.19
CHMP3-203ENST00000409225 BTRCQ9Y297 605 aa16.26■□□□□ 0.19
CHMP3-203ENST00000409225 ZNF711Q9Y462 761 aa16.26■□□□□ 0.19
CHMP3-203ENST00000409225 SPTBP11277 2137 aa16.25■□□□□ 0.19
CHMP3-203ENST00000409225 OR6C74A6NCV1 312 aa16.25■□□□□ 0.19
CHMP3-203ENST00000409225 TMEM150CB9EJG8 249 aa16.25■□□□□ 0.19
CHMP3-203ENST00000409225 CYP2A7P20853 494 aa16.25■□□□□ 0.19
CHMP3-203ENST00000409225 SLC25A11Q02978 314 aaKnown RBP16.25■□□□□ 0.19
CHMP3-203ENST00000409225 MYBPC3Q14896 1274 aa16.25■□□□□ 0.19
CHMP3-203ENST00000409225 PAFAH1B3Q15102 231 aaKnown RBP16.25■□□□□ 0.19
CHMP3-203ENST00000409225 FAM182AQ5T1J6 154 aa16.25■□□□□ 0.19
CHMP3-203ENST00000409225 DUS1LQ6P1R4 473 aaKnown RBP16.25■□□□□ 0.19
CHMP3-203ENST00000409225 IGFL3Q6UXB1 125 aa16.25■□□□□ 0.19
CHMP3-203ENST00000409225 MRGPREQ86SM8 312 aa16.25■□□□□ 0.19
CHMP3-203ENST00000409225 AMZ2Q86W34 360 aa16.25■□□□□ 0.19
CHMP3-203ENST00000409225 GALNT16Q8N428 558 aa16.25■□□□□ 0.19
CHMP3-203ENST00000409225 ZADH2Q8N4Q0 377 aa16.25■□□□□ 0.19
CHMP3-203ENST00000409225 CLEC1AQ8NC01 280 aa16.25■□□□□ 0.19
CHMP3-203ENST00000409225 OR1L3Q8NH93 324 aa16.25■□□□□ 0.19
CHMP3-203ENST00000409225 FATE1Q969F0 183 aa16.25■□□□□ 0.19
CHMP3-203ENST00000409225 BTBD6Q96KE9 485 aa16.25■□□□□ 0.19
CHMP3-203ENST00000409225 TTC25Q96NG3 672 aa16.25■□□□□ 0.19
CHMP3-203ENST00000409225 TSGA13Q96PP4 275 aa16.25■□□□□ 0.19
CHMP3-203ENST00000409225 ERGIC2Q96RQ1 377 aa16.25■□□□□ 0.19
CHMP3-203ENST00000409225 SLC7A5P2Q9GIP4 190 aa16.25■□□□□ 0.19
CHMP3-203ENST00000409225 ZNF552Q9H707 407 aaPredicted RBP16.25■□□□□ 0.19
CHMP3-203ENST00000409225 SLC9B1P1A6NJY1 282 aa16.24■□□□□ 0.19
CHMP3-203ENST00000409225 C9J4A7 227 aa16.24■□□□□ 0.19
CHMP3-203ENST00000409225 MASP2O00187 686 aa16.24■□□□□ 0.19
CHMP3-203ENST00000409225 POP7O75817 140 aaKnown RBP16.24■□□□□ 0.19
CHMP3-203ENST00000409225 MTHFD1P11586 935 aaKnown RBP16.24■□□□□ 0.19
CHMP3-203ENST00000409225 SSR1P43307 286 aaKnown RBP16.24■□□□□ 0.19
CHMP3-203ENST00000409225 XRCC4Q13426 336 aa16.24■□□□□ 0.19
CHMP3-203ENST00000409225 NFE2L1Q14494 772 aa16.24■□□□□ 0.19
CHMP3-203ENST00000409225 ATP13A5Q4VNC0 1218 aa16.24■□□□□ 0.19
CHMP3-203ENST00000409225 Q6ZS92 163 aa16.24■□□□□ 0.19
CHMP3-203ENST00000409225 ZNF571Q7Z3V5 609 aaPredicted RBP16.24■□□□□ 0.19
CHMP3-203ENST00000409225 CCNYQ8ND76 341 aa16.24■□□□□ 0.19
CHMP3-203ENST00000409225 ANKRD20A12PQ8NF67 263 aa16.24■□□□□ 0.19
CHMP3-203ENST00000409225 TM9SF4Q92544 642 aa16.24■□□□□ 0.19
CHMP3-203ENST00000409225 FER1L6-AS2Q96M78 137 aa16.24■□□□□ 0.19
CHMP3-203ENST00000409225 VPS35Q96QK1 796 aa16.24■□□□□ 0.19
CHMP3-203ENST00000409225 TRIB3Q96RU7 358 aa16.24■□□□□ 0.19
CHMP3-203ENST00000409225 NUP62CLQ9H1M0 184 aa16.24■□□□□ 0.19
CHMP3-203ENST00000409225 HAUS4Q9H6D7 363 aa16.24■□□□□ 0.19
CHMP3-203ENST00000409225 ZBTB20Q9HC78 741 aaPredicted RBP16.24■□□□□ 0.19
CHMP3-203ENST00000409225 MAGEE1Q9HCI5 957 aa16.24■□□□□ 0.19
CHMP3-203ENST00000409225 BPIFA1Q9NP55 256 aa16.24■□□□□ 0.19
CHMP3-203ENST00000409225 LIMA1Q9UHB6 759 aaKnown RBP16.24■□□□□ 0.19
CHMP3-203ENST00000409225 KCNK1O00180 336 aa16.23■□□□□ 0.19
CHMP3-203ENST00000409225 LDB2O43679 373 aa16.23■□□□□ 0.19
CHMP3-203ENST00000409225 KCNJ13O60928 360 aa16.23■□□□□ 0.19
CHMP3-203ENST00000409225 GZMAP12544 262 aa16.23■□□□□ 0.19
CHMP3-203ENST00000409225 POLR2CP19387 275 aaPredicted RBP16.23■□□□□ 0.19
CHMP3-203ENST00000409225 CDH3P22223 829 aa16.23■□□□□ 0.19
CHMP3-203ENST00000409225 PBLDP30039 288 aaPredicted RBP16.23■□□□□ 0.19
CHMP3-203ENST00000409225 GJC1P36383 396 aa16.23■□□□□ 0.19
CHMP3-203ENST00000409225 CTSCP53634 463 aa16.23■□□□□ 0.19
CHMP3-203ENST00000409225 DMPKQ09013 629 aa16.23■□□□□ 0.19
CHMP3-203ENST00000409225 DPYSL3Q14195 570 aa16.23■□□□□ 0.19
CHMP3-203ENST00000409225 PIGHQ14442 188 aaPredicted RBP16.23■□□□□ 0.19
CHMP3-203ENST00000409225 ASIC2Q16515 512 aa16.23■□□□□ 0.19
CHMP3-203ENST00000409225 PCSK7Q16549 785 aa16.23■□□□□ 0.19
CHMP3-203ENST00000409225 ANO6Q4KMQ2 910 aa16.23■□□□□ 0.19
CHMP3-203ENST00000409225 DCAF10Q5QP82 559 aa16.23■□□□□ 0.19
CHMP3-203ENST00000409225 SPOCD1Q6ZMY3 1216 aa16.23■□□□□ 0.19
CHMP3-203ENST00000409225 KCNMB4Q86W47 210 aa16.23■□□□□ 0.19
CHMP3-203ENST00000409225 TRIM11Q96F44 468 aa16.23■□□□□ 0.19
CHMP3-203ENST00000409225 RUBCNLQ9H714 662 aa16.23■□□□□ 0.19
CHMP3-203ENST00000409225 PADI2Q9Y2J8 665 aa16.23■□□□□ 0.19
CHMP3-203ENST00000409225 MDC1Q14676 2089 aaKnown RBP16.23■□□□□ 0.19
CHMP3-203ENST00000409225 PDZD2O15018 2839 aa16.22■□□□□ 0.19
CHMP3-203ENST00000409225 ADGRG4Q8IZF6 3080 aa16.22■□□□□ 0.19
CHMP3-203ENST00000409225 LRRC53A6NM62 1247 aa16.22■□□□□ 0.19
CHMP3-203ENST00000409225 DDX3XO00571 662 aaKnown RBP eCLIP16.22■□□□□ 0.195e-10■■■□□ 17.8
CHMP3-203ENST00000409225 PEX12O00623 359 aa16.22■□□□□ 0.19
CHMP3-203ENST00000409225 E2F3O00716 465 aa16.22■□□□□ 0.19
CHMP3-203ENST00000409225 KLHL41O60662 606 aa16.22■□□□□ 0.19
CHMP3-203ENST00000409225 MYBL1P10243 752 aa16.22■□□□□ 0.19
CHMP3-203ENST00000409225 GBE1Q04446 702 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms