RNA–Protein interactions for RNA: ENST00000409219.5

CHRNA1-203, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-203ENST00000409219 QPCTQ16769 361 aa12.53□□□□□ -0.4
CHRNA1-203ENST00000409219 SMTNL2Q2TAL5 461 aa12.53□□□□□ -0.4
CHRNA1-203ENST00000409219 FBXO38Q6PIJ6 1188 aa12.53□□□□□ -0.4
CHRNA1-203ENST00000409219 SASS6Q6UVJ0 657 aa12.53□□□□□ -0.4
CHRNA1-203ENST00000409219 POLNQ7Z5Q5 900 aa12.53□□□□□ -0.4
CHRNA1-203ENST00000409219 ARRDC2Q8TBH0 407 aa12.53□□□□□ -0.4
CHRNA1-203ENST00000409219 FER1L6-AS2Q96M78 137 aa12.53□□□□□ -0.4
CHRNA1-203ENST00000409219 WDR77Q9BQA1 342 aaPredicted RBP12.53□□□□□ -0.4
CHRNA1-203ENST00000409219 ZSCAN5AQ9BUG6 496 aa12.53□□□□□ -0.4
CHRNA1-203ENST00000409219 NUP85Q9BW27 656 aa12.53□□□□□ -0.4
CHRNA1-203ENST00000409219 TRIM8Q9BZR9 551 aa12.53□□□□□ -0.4
CHRNA1-203ENST00000409219 RRAGDQ9NQL2 400 aaPredicted RBP12.53□□□□□ -0.4
CHRNA1-203ENST00000409219 SAMSN1Q9NSI8 373 aaKnown RBP12.53□□□□□ -0.4
CHRNA1-203ENST00000409219 SOHLH2Q9NX45 425 aa12.53□□□□□ -0.4
CHRNA1-203ENST00000409219 TAB2Q9NYJ8 693 aa12.53□□□□□ -0.4
CHRNA1-203ENST00000409219 RPL26L1Q9UNX3 145 aaKnown RBP12.53□□□□□ -0.4
CHRNA1-203ENST00000409219 TTLL3Q9Y4R7 772 aa12.53□□□□□ -0.4
CHRNA1-203ENST00000409219 KLF2Q9Y5W3 355 aaPredicted RBP12.53□□□□□ -0.4
CHRNA1-203ENST00000409219 CNTRLQ7Z7A1 2325 aa12.53□□□□□ -0.4
CHRNA1-203ENST00000409219 DOCK10Q96BY6 2186 aa12.53□□□□□ -0.4
CHRNA1-203ENST00000409219 A0A1B0GUH1 482 aa12.53□□□□□ -0.4
CHRNA1-203ENST00000409219 KLF7O75840 302 aaPredicted RBP12.53□□□□□ -0.4
CHRNA1-203ENST00000409219 RNF8O76064 485 aa12.53□□□□□ -0.4
CHRNA1-203ENST00000409219 CDK14O94921 469 aa12.53□□□□□ -0.4
CHRNA1-203ENST00000409219 SNRPB2P08579 225 aaKnown RBP12.53□□□□□ -0.4
CHRNA1-203ENST00000409219 TCF4P15884 667 aa12.53□□□□□ -0.4
CHRNA1-203ENST00000409219 IL1R2P27930 398 aa12.53□□□□□ -0.4
CHRNA1-203ENST00000409219 SERPINB6P35237 376 aa12.53□□□□□ -0.4
CHRNA1-203ENST00000409219 KPNA2P52292 529 aaKnown RBP12.53□□□□□ -0.4
CHRNA1-203ENST00000409219 TMTC4Q5T4D3 741 aa12.53□□□□□ -0.4
CHRNA1-203ENST00000409219 PLEKHA7Q6IQ23 1121 aa12.53□□□□□ -0.4
CHRNA1-203ENST00000409219 ACAD10Q6JQN1 1059 aa12.53□□□□□ -0.4
CHRNA1-203ENST00000409219 SPNS3Q6ZMD2 512 aa12.53□□□□□ -0.4
CHRNA1-203ENST00000409219 NXPE1Q8N323 547 aa12.53□□□□□ -0.4
CHRNA1-203ENST00000409219 TRAM1L1Q8N609 369 aa12.53□□□□□ -0.4
CHRNA1-203ENST00000409219 OR1L3Q8NH93 324 aa12.53□□□□□ -0.4
CHRNA1-203ENST00000409219 FAR1Q8WVX9 515 aa12.53□□□□□ -0.4
CHRNA1-203ENST00000409219 ITLN2Q8WWU7 325 aaPredicted RBP12.53□□□□□ -0.4
CHRNA1-203ENST00000409219 TRAPPC9Q96Q05 1148 aa12.53□□□□□ -0.4
CHRNA1-203ENST00000409219 AGPAT1Q99943 283 aa12.53□□□□□ -0.4
CHRNA1-203ENST00000409219 ACTR5Q9H9F9 607 aaPredicted RBP12.53□□□□□ -0.4
CHRNA1-203ENST00000409219 PARVAQ9NVD7 372 aa12.53□□□□□ -0.4
CHRNA1-203ENST00000409219 TAS2R14Q9NYV8 317 aa12.53□□□□□ -0.4
CHRNA1-203ENST00000409219 NFKBIL1Q9UBC1 381 aaPredicted RBP12.53□□□□□ -0.4
CHRNA1-203ENST00000409219 PADI2Q9Y2J8 665 aa12.53□□□□□ -0.4
CHRNA1-203ENST00000409219 TMEM191CA6NGB0 347 aa12.52□□□□□ -0.41
CHRNA1-203ENST00000409219 ANKRD66B4E2M5 251 aa12.52□□□□□ -0.41
CHRNA1-203ENST00000409219 C9J4A7 227 aa12.52□□□□□ -0.41
CHRNA1-203ENST00000409219 VEGFDO43915 354 aa12.52□□□□□ -0.41
CHRNA1-203ENST00000409219 KLHL41O60662 606 aa12.52□□□□□ -0.41
CHRNA1-203ENST00000409219 DIAPH2O60879 1101 aa12.52□□□□□ -0.41
CHRNA1-203ENST00000409219 CA4P22748 312 aa12.52□□□□□ -0.41
CHRNA1-203ENST00000409219 NIPAL4Q0D2K0 466 aa12.52□□□□□ -0.41
CHRNA1-203ENST00000409219 RPE65Q16518 533 aa12.52□□□□□ -0.41
CHRNA1-203ENST00000409219 TCP11X2Q5H9J9 407 aa12.52□□□□□ -0.41
CHRNA1-203ENST00000409219 ZNF385CQ66K41 422 aaPredicted RBP12.52□□□□□ -0.41
CHRNA1-203ENST00000409219 PDPK2PQ6A1A2 396 aa12.52□□□□□ -0.41
CHRNA1-203ENST00000409219 TRAPPC5Q8IUR0 188 aa12.52□□□□□ -0.41
CHRNA1-203ENST00000409219 PPP4R1Q8TF05 950 aa12.52□□□□□ -0.41
CHRNA1-203ENST00000409219 MAML1Q92585 1016 aa12.52□□□□□ -0.41
CHRNA1-203ENST00000409219 ZNF653Q96CK0 615 aa12.52□□□□□ -0.41
CHRNA1-203ENST00000409219 IP6K3Q96PC2 410 aa12.52□□□□□ -0.41
CHRNA1-203ENST00000409219 SLX1AQ9BQ83 275 aa12.52□□□□□ -0.41
CHRNA1-203ENST00000409219 DHRS4Q9BTZ2 278 aa12.52□□□□□ -0.41
CHRNA1-203ENST00000409219 FANCEQ9HB96 536 aa12.52□□□□□ -0.41
CHRNA1-203ENST00000409219 ZFYVE1Q9HBF4 777 aa12.52□□□□□ -0.41
CHRNA1-203ENST00000409219 HRASLS2Q9NWW9 162 aa12.52□□□□□ -0.41
CHRNA1-203ENST00000409219 TMPRSS11EQ9UL52 423 aa12.52□□□□□ -0.41
CHRNA1-203ENST00000409219 PSMD13Q9UNM6 376 aa12.52□□□□□ -0.41
CHRNA1-203ENST00000409219 TMEM150CB9EJG8 249 aa12.51□□□□□ -0.41
CHRNA1-203ENST00000409219 LDB2O43679 373 aa12.51□□□□□ -0.41
CHRNA1-203ENST00000409219 MFSD11O43934 449 aa12.51□□□□□ -0.41
CHRNA1-203ENST00000409219 HLA-DQB2P05538 268 aa12.51□□□□□ -0.41
CHRNA1-203ENST00000409219 ATP1A3P13637 1013 aa12.51□□□□□ -0.41
CHRNA1-203ENST00000409219 VCLP18206 1134 aa12.51□□□□□ -0.41
CHRNA1-203ENST00000409219 CYP2A7P20853 494 aa12.51□□□□□ -0.41
CHRNA1-203ENST00000409219 CES1P23141 567 aa12.51□□□□□ -0.41
CHRNA1-203ENST00000409219 EEF1GP26641 437 aaKnown RBP12.51□□□□□ -0.41
CHRNA1-203ENST00000409219 TSFMP43897 325 aaKnown RBP12.51□□□□□ -0.41
CHRNA1-203ENST00000409219 ARCN1P48444 511 aaKnown RBP12.51□□□□□ -0.41
CHRNA1-203ENST00000409219 SOX8P57073 446 aa12.51□□□□□ -0.41
CHRNA1-203ENST00000409219 STX1AQ16623 288 aa12.51□□□□□ -0.41
CHRNA1-203ENST00000409219 HIF1AQ16665 826 aa12.51□□□□□ -0.41
CHRNA1-203ENST00000409219 DPCR1Q3MIW9 517 aa12.51□□□□□ -0.41
CHRNA1-203ENST00000409219 OOSP2Q86WS3 158 aa12.51□□□□□ -0.41
CHRNA1-203ENST00000409219 CARFQ8N187 725 aa12.51□□□□□ -0.41
CHRNA1-203ENST00000409219 HSPH1Q92598 858 aa12.51□□□□□ -0.41
CHRNA1-203ENST00000409219 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.51□□□□□ -0.41
CHRNA1-203ENST00000409219 SPG11Q96JI7 2443 aa12.5□□□□□ -0.41
CHRNA1-203ENST00000409219 ZNF469Q96JG9 3925 aaPredicted RBP12.5□□□□□ -0.41
CHRNA1-203ENST00000409219 A0A1W2PQJ5 194 aa12.5□□□□□ -0.41
CHRNA1-203ENST00000409219 SLC4A1P02730 911 aa12.5□□□□□ -0.41
CHRNA1-203ENST00000409219 COX6B1P14854 86 aa12.5□□□□□ -0.41
CHRNA1-203ENST00000409219 HADHAP40939 763 aa12.5□□□□□ -0.41
CHRNA1-203ENST00000409219 ZNF165P49910 485 aa12.5□□□□□ -0.41
CHRNA1-203ENST00000409219 DMPKQ09013 629 aa12.5□□□□□ -0.41
CHRNA1-203ENST00000409219 GALNT3Q14435 633 aa12.5□□□□□ -0.41
CHRNA1-203ENST00000409219 SSPNQ14714 243 aa12.5□□□□□ -0.41
CHRNA1-203ENST00000409219 DUS1LQ6P1R4 473 aaKnown RBP12.5□□□□□ -0.41
CHRNA1-203ENST00000409219 BNC2Q6ZN30 1099 aaPredicted RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms