RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 TENM4Q6N022 2769 aa18.89■□□□□ 0.61
SMARCB1-204ENST00000407422 AGAP14A8MT82 685 aa18.89■□□□□ 0.61
SMARCB1-204ENST00000407422 POLR1CO15160 346 aaPredicted RBP18.89■□□□□ 0.61
SMARCB1-204ENST00000407422 LDB2O43679 373 aa18.89■□□□□ 0.61
SMARCB1-204ENST00000407422 RASSF9O75901 435 aa18.89■□□□□ 0.61
SMARCB1-204ENST00000407422 PPP1CAP62136 330 aa18.89■□□□□ 0.61
SMARCB1-204ENST00000407422 SH3BP2P78314 561 aa18.89■□□□□ 0.61
SMARCB1-204ENST00000407422 PARP6Q2NL67 630 aa18.89■□□□□ 0.61
SMARCB1-204ENST00000407422 FAM92BQ6ZTR7 304 aa18.89■□□□□ 0.61
SMARCB1-204ENST00000407422 TXLNBQ8N3L3 684 aa18.89■□□□□ 0.61
SMARCB1-204ENST00000407422 TAB3Q8N5C8 712 aaPredicted RBP18.89■□□□□ 0.61
SMARCB1-204ENST00000407422 SLC35B2Q8TB61 432 aa18.89■□□□□ 0.61
SMARCB1-204ENST00000407422 MED8Q96G25 268 aa18.89■□□□□ 0.61
SMARCB1-204ENST00000407422 ZNF514Q96K75 400 aaPredicted RBP18.89■□□□□ 0.61
SMARCB1-204ENST00000407422 PPP1R2P1Q96PQ5 205 aa18.89■□□□□ 0.61
SMARCB1-204ENST00000407422 MGAT4DA6NG13 374 aa18.88■□□□□ 0.61
SMARCB1-204ENST00000407422 TPH1P17752 444 aa18.88■□□□□ 0.61
SMARCB1-204ENST00000407422 PDE1BQ01064 536 aa18.88■□□□□ 0.61
SMARCB1-204ENST00000407422 FOXM1Q08050 763 aa18.88■□□□□ 0.61
SMARCB1-204ENST00000407422 IRGCQ6NXR0 463 aa18.88■□□□□ 0.61
SMARCB1-204ENST00000407422 ZNF605Q86T29 641 aa18.88■□□□□ 0.61
SMARCB1-204ENST00000407422 SPDYE1Q8NFV5 336 aaPredicted RBP18.88■□□□□ 0.61
SMARCB1-204ENST00000407422 DNAJC1Q96KC8 554 aaKnown RBP18.88■□□□□ 0.61
SMARCB1-204ENST00000407422 SLC12A9Q9BXP2 914 aa18.88■□□□□ 0.61
SMARCB1-204ENST00000407422 WWP1Q9H0M0 922 aa18.88■□□□□ 0.61
SMARCB1-204ENST00000407422 IMP3Q9NV31 184 aaKnown RBP18.88■□□□□ 0.61
SMARCB1-204ENST00000407422 PIH1D1Q9NWS0 290 aaKnown RBP18.88■□□□□ 0.61
SMARCB1-204ENST00000407422 CRLS1Q9UJA2 301 aa18.88■□□□□ 0.61
SMARCB1-204ENST00000407422 SPTA1P02549 2419 aa18.87■□□□□ 0.61
SMARCB1-204ENST00000407422 STK17BO94768 372 aa18.87■□□□□ 0.61
SMARCB1-204ENST00000407422 ITGB2P05107 769 aa18.87■□□□□ 0.61
SMARCB1-204ENST00000407422 CDKN1CP49918 316 aaPredicted RBP18.87■□□□□ 0.61
SMARCB1-204ENST00000407422 DUS1LQ6P1R4 473 aaKnown RBP18.87■□□□□ 0.61
SMARCB1-204ENST00000407422 UNC5BQ8IZJ1 945 aa18.87■□□□□ 0.61
SMARCB1-204ENST00000407422 NLGN4XQ8N0W4 816 aa18.87■□□□□ 0.61
SMARCB1-204ENST00000407422 NXPE1Q8N323 547 aa18.87■□□□□ 0.61
SMARCB1-204ENST00000407422 LILRA3Q8N6C8 439 aaPredicted RBP18.87■□□□□ 0.61
SMARCB1-204ENST00000407422 NLGN4YQ8NFZ3 816 aaPredicted RBP18.87■□□□□ 0.61
SMARCB1-204ENST00000407422 ATG4AQ8WYN0 398 aa18.87■□□□□ 0.61
SMARCB1-204ENST00000407422 INSM2Q96T92 566 aaPredicted RBP18.87■□□□□ 0.61
SMARCB1-204ENST00000407422 ZPBPQ9BS86 351 aa18.87■□□□□ 0.61
SMARCB1-204ENST00000407422 ZNF768Q9H5H4 540 aaKnown RBP18.87■□□□□ 0.61
SMARCB1-204ENST00000407422 TOX3O15405 576 aaPredicted RBP18.86■□□□□ 0.61
SMARCB1-204ENST00000407422 ZNF189O75820 626 aaPredicted RBP18.86■□□□□ 0.61
SMARCB1-204ENST00000407422 PRSS56P0CW18 603 aa18.86■□□□□ 0.61
SMARCB1-204ENST00000407422 MTHFD1P11586 935 aaKnown RBP18.86■□□□□ 0.61
SMARCB1-204ENST00000407422 PLA2G2AP14555 144 aa18.86■□□□□ 0.61
SMARCB1-204ENST00000407422 TBR1Q16650 682 aa18.86■□□□□ 0.61
SMARCB1-204ENST00000407422 BCL7AQ4VC05 210 aa18.86■□□□□ 0.61
SMARCB1-204ENST00000407422 CACHD1Q5VU97 1274 aa18.86■□□□□ 0.61
SMARCB1-204ENST00000407422 SNX20Q7Z614 316 aa18.86■□□□□ 0.61
SMARCB1-204ENST00000407422 OR2L2Q8NH16 312 aa18.86■□□□□ 0.61
SMARCB1-204ENST00000407422 DCUN1D1Q96GG9 259 aa18.86■□□□□ 0.61
SMARCB1-204ENST00000407422 ZDHHC12Q96GR4 267 aa18.86■□□□□ 0.61
SMARCB1-204ENST00000407422 EPHA6Q9UF33 1036 aa18.86■□□□□ 0.61
SMARCB1-204ENST00000407422 FEZ2Q9UHY8 353 aaPredicted RBP18.86■□□□□ 0.61
SMARCB1-204ENST00000407422 TMEM184BQ9Y519 407 aaPredicted RBP18.86■□□□□ 0.61
SMARCB1-204ENST00000407422 LOC101059948A0A1B0GTJ6 334 aa18.85■□□□□ 0.61
SMARCB1-204ENST00000407422 FAM87AP0C7U9 286 aa18.85■□□□□ 0.61
SMARCB1-204ENST00000407422 ZNF28P17035 718 aa18.85■□□□□ 0.61
SMARCB1-204ENST00000407422 ITGALP20701 1170 aa18.85■□□□□ 0.61
SMARCB1-204ENST00000407422 MC4RP32245 332 aa18.85■□□□□ 0.61
SMARCB1-204ENST00000407422 HADHAP40939 763 aa18.85■□□□□ 0.61
SMARCB1-204ENST00000407422 POU6F1Q14863 301 aa18.85■□□□□ 0.61
SMARCB1-204ENST00000407422 PRSS42Q7Z5A4 293 aa18.85■□□□□ 0.61
SMARCB1-204ENST00000407422 RNF10Q8N5U6 811 aaKnown RBP18.85■□□□□ 0.61
SMARCB1-204ENST00000407422 LINC00615Q96LM1 132 aaPredicted RBP18.85■□□□□ 0.61
SMARCB1-204ENST00000407422 C12orf66Q96MD2 445 aa18.85■□□□□ 0.61
SMARCB1-204ENST00000407422 OR6C1Q96RD1 312 aa18.85■□□□□ 0.61
SMARCB1-204ENST00000407422 ARHGAP9Q9BRR9 750 aa18.85■□□□□ 0.61
SMARCB1-204ENST00000407422 RAB33BQ9H082 229 aa18.85■□□□□ 0.61
SMARCB1-204ENST00000407422 LRRC40Q9H9A6 602 aa18.85■□□□□ 0.61
SMARCB1-204ENST00000407422 GUCA1BQ9UMX6 200 aa18.85■□□□□ 0.61
SMARCB1-204ENST00000407422 DLGAP3O95886 979 aa18.85■□□□□ 0.61
SMARCB1-204ENST00000407422 POLBP06746 335 aa18.85■□□□□ 0.61
SMARCB1-204ENST00000407422 MAP4P27816 1152 aaKnown RBP18.85■□□□□ 0.61
SMARCB1-204ENST00000407422 PLCL1Q15111 1095 aa18.85■□□□□ 0.61
SMARCB1-204ENST00000407422 CFAP206Q8IYR0 622 aa18.85■□□□□ 0.61
SMARCB1-204ENST00000407422 KLHL6Q8WZ60 621 aa18.85■□□□□ 0.61
SMARCB1-204ENST00000407422 ULK4Q96C45 1275 aa18.85■□□□□ 0.61
SMARCB1-204ENST00000407422 LRRC45Q96CN5 670 aa18.85■□□□□ 0.61
SMARCB1-204ENST00000407422 ELMO2Q96JJ3 720 aa18.85■□□□□ 0.61
SMARCB1-204ENST00000407422 COPS8Q99627 209 aa18.85■□□□□ 0.61
SMARCB1-204ENST00000407422 C19orf43Q9BQ61 176 aa18.85■□□□□ 0.61
SMARCB1-204ENST00000407422 ACSL5Q9ULC5 683 aa18.85■□□□□ 0.61
SMARCB1-204ENST00000407422 IGHV5-51A0A0C4DH38 117 aa18.84■□□□□ 0.61
SMARCB1-204ENST00000407422 AP2A1O95782 977 aa18.84■□□□□ 0.61
SMARCB1-204ENST00000407422 RALBP11234 206 aa18.84■□□□□ 0.61
SMARCB1-204ENST00000407422 ATP1B2P14415 290 aaPredicted RBP18.84■□□□□ 0.61
SMARCB1-204ENST00000407422 PRLHRP49683 370 aa18.84■□□□□ 0.61
SMARCB1-204ENST00000407422 SEPT6Q14141 434 aa18.84■□□□□ 0.61
SMARCB1-204ENST00000407422 P3H1Q32P28 736 aa18.84■□□□□ 0.61
SMARCB1-204ENST00000407422 ZRANB3Q5FWF4 1079 aa18.84■□□□□ 0.61
SMARCB1-204ENST00000407422 RMDN2Q96LZ7 410 aa18.84■□□□□ 0.61
SMARCB1-204ENST00000407422 ULBP3Q9BZM4 244 aa18.84■□□□□ 0.61
SMARCB1-204ENST00000407422 GPN2Q9H9Y4 310 aaPredicted RBP18.84■□□□□ 0.61
SMARCB1-204ENST00000407422 NLE1Q9NVX2 485 aaPredicted RBP18.84■□□□□ 0.61
SMARCB1-204ENST00000407422 IL17BQ9UHF5 180 aa18.84■□□□□ 0.61
SMARCB1-204ENST00000407422 CCDC78A2IDD5 438 aa18.83■□□□□ 0.61
SMARCB1-204ENST00000407422 NELFEP18615 380 aaKnown RBP18.83■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms