RNA–Protein interactions for RNA: ENST00000406881.3

PCDH11X-207, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,156 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-207ENST00000406881 CCDC177Q9NQR7 707 aaPredicted RBP4.68□□□□□ -1.66
PCDH11X-207ENST00000406881 ZIM2Q9NZV7 527 aa4.68□□□□□ -1.66
PCDH11X-207ENST00000406881 PRKAG3Q9UGI9 489 aa4.68□□□□□ -1.66
PCDH11X-207ENST00000406881 GPSM3Q9Y4H4 160 aa4.68□□□□□ -1.66
PCDH11X-207ENST00000406881 TIMM22Q9Y584 194 aa4.68□□□□□ -1.66
PCDH11X-207ENST00000406881 PSAT1Q9Y617 370 aa4.68□□□□□ -1.66
PCDH11X-207ENST00000406881 C2orf71A6NGG8 1288 aa4.68□□□□□ -1.66
PCDH11X-207ENST00000406881 ITM2AO43736 263 aa4.68□□□□□ -1.66
PCDH11X-207ENST00000406881 ALDOAP04075 364 aaKnown RBP4.68□□□□□ -1.66
PCDH11X-207ENST00000406881 CHRNGP07510 517 aa4.68□□□□□ -1.66
PCDH11X-207ENST00000406881 FGF3P11487 239 aaPredicted RBP4.68□□□□□ -1.66
PCDH11X-207ENST00000406881 GNAZP19086 355 aa4.68□□□□□ -1.66
PCDH11X-207ENST00000406881 SRSF11Q05519 484 aaKnown RBP4.68□□□□□ -1.66
PCDH11X-207ENST00000406881 TRIM25Q14258 630 aaKnown RBP4.68□□□□□ -1.66
PCDH11X-207ENST00000406881 PHKG1Q16816 387 aa4.68□□□□□ -1.66
PCDH11X-207ENST00000406881 CCDC142Q17RM4 750 aa4.68□□□□□ -1.66
PCDH11X-207ENST00000406881 RAB6CQ53S08 254 aa4.68□□□□□ -1.66
PCDH11X-207ENST00000406881 CLEC6AQ6EIG7 209 aa4.68□□□□□ -1.66
PCDH11X-207ENST00000406881 KLHL35Q6PF15 583 aa4.68□□□□□ -1.66
PCDH11X-207ENST00000406881 TMEM220Q6QAJ8 160 aa4.68□□□□□ -1.66
PCDH11X-207ENST00000406881 CRTC3Q6UUV7 619 aa4.68□□□□□ -1.66
PCDH11X-207ENST00000406881 GPR65Q8IYL9 337 aa4.68□□□□□ -1.66
PCDH11X-207ENST00000406881 CMTM8Q8IZV2 173 aa4.68□□□□□ -1.66
PCDH11X-207ENST00000406881 CYP4Z2PQ8N1L4 340 aa4.68□□□□□ -1.66
PCDH11X-207ENST00000406881 FAM210AQ96ND0 272 aa4.68□□□□□ -1.66
PCDH11X-207ENST00000406881 BTBD9Q96Q07 612 aa4.68□□□□□ -1.66
PCDH11X-207ENST00000406881 FERD3LQ96RJ6 166 aa4.68□□□□□ -1.66
PCDH11X-207ENST00000406881 TBCDQ9BTW9 1192 aa4.68□□□□□ -1.66
PCDH11X-207ENST00000406881 EFCAB11Q9BUY7 163 aa4.68□□□□□ -1.66
PCDH11X-207ENST00000406881 TDRD1Q9BXT4 1180 aaKnown RBP4.68□□□□□ -1.66
PCDH11X-207ENST00000406881 RAB6CQ9H0N0 254 aa4.68□□□□□ -1.66
PCDH11X-207ENST00000406881 EPB41L4BQ9H329 900 aa4.68□□□□□ -1.66
PCDH11X-207ENST00000406881 TRIT1Q9H3H1 467 aaKnown RBP4.68□□□□□ -1.66
PCDH11X-207ENST00000406881 ARNT2Q9HBZ2 717 aa4.68□□□□□ -1.66
PCDH11X-207ENST00000406881 INTS7Q9NVH2 962 aaKnown RBP4.68□□□□□ -1.66
PCDH11X-207ENST00000406881 FBXO10Q9UK96 956 aa4.68□□□□□ -1.66
PCDH11X-207ENST00000406881 SAMD4AQ9UPU9 718 aaKnown RBP4.68□□□□□ -1.66
PCDH11X-207ENST00000406881 SNX8Q9Y5X2 465 aa4.68□□□□□ -1.66
PCDH11X-207ENST00000406881 ANKRD31Q8N7Z5 1873 aa4.68□□□□□ -1.66
PCDH11X-207ENST00000406881 TBC1D3DA0A087WVF3 549 aa4.68□□□□□ -1.66
PCDH11X-207ENST00000406881 TBC1D3IA0A087WXS9 549 aa4.68□□□□□ -1.66
PCDH11X-207ENST00000406881 TBC1D3EA0A087X179 549 aa4.68□□□□□ -1.66
PCDH11X-207ENST00000406881 TBC1D3KA0A087X1G2 549 aa4.68□□□□□ -1.66
PCDH11X-207ENST00000406881 TBC1D3FA6NER0 549 aaPredicted RBP4.68□□□□□ -1.66
PCDH11X-207ENST00000406881 LRRC72A6NJI9 287 aa4.68□□□□□ -1.66
PCDH11X-207ENST00000406881 TBC1D3LB9A6J9 549 aa4.68□□□□□ -1.66
PCDH11X-207ENST00000406881 SLC16A5O15375 505 aa4.68□□□□□ -1.66
PCDH11X-207ENST00000406881 TEX28O15482 410 aa4.68□□□□□ -1.66
PCDH11X-207ENST00000406881 CNOT3O75175 753 aaKnown RBP4.68□□□□□ -1.66
PCDH11X-207ENST00000406881 TULP3O75386 442 aa4.68□□□□□ -1.66
PCDH11X-207ENST00000406881 ABCB1P08183 1280 aaPredicted RBP4.68□□□□□ -1.66
PCDH11X-207ENST00000406881 DLDP09622 509 aaKnown RBP4.68□□□□□ -1.66
PCDH11X-207ENST00000406881 TBC1D3HP0C7X1 549 aa4.68□□□□□ -1.66
PCDH11X-207ENST00000406881 TYRP14679 529 aa4.68□□□□□ -1.66
PCDH11X-207ENST00000406881 CSF2RAP15509 400 aa4.68□□□□□ -1.66
PCDH11X-207ENST00000406881 ITPKAP23677 461 aa4.68□□□□□ -1.66
PCDH11X-207ENST00000406881 RPL34P49207 117 aaKnown RBP4.68□□□□□ -1.66
PCDH11X-207ENST00000406881 EEFSECP57772 596 aaKnown RBP4.68□□□□□ -1.66
PCDH11X-207ENST00000406881 ACTR3P61158 418 aa4.68□□□□□ -1.66
PCDH11X-207ENST00000406881 USP46P62068 366 aa4.68□□□□□ -1.66
PCDH11X-207ENST00000406881 CHIT1Q13231 466 aa4.68□□□□□ -1.66
PCDH11X-207ENST00000406881 KCNC3Q14003 757 aa4.68□□□□□ -1.66
PCDH11X-207ENST00000406881 EIF4HQ15056 248 aaKnown RBP4.68□□□□□ -1.66
PCDH11X-207ENST00000406881 TEAD2Q15562 447 aa4.68□□□□□ -1.66
PCDH11X-207ENST00000406881 OTUD3Q5T2D3 398 aaPredicted RBP4.68□□□□□ -1.66
PCDH11X-207ENST00000406881 MPP7Q5T2T1 576 aa4.68□□□□□ -1.66
PCDH11X-207ENST00000406881 C10orf62Q5T681 223 aaPredicted RBP4.68□□□□□ -1.66
PCDH11X-207ENST00000406881 TBC1D3GQ6DHY5 549 aa4.68□□□□□ -1.66
PCDH11X-207ENST00000406881 TBC1D3CQ6IPX1 549 aa4.68□□□□□ -1.66
PCDH11X-207ENST00000406881 GCNT7Q6ZNI0 430 aa4.68□□□□□ -1.66
PCDH11X-207ENST00000406881 TBC1D3Q8IZP1 549 aaPredicted RBP4.68□□□□□ -1.66
PCDH11X-207ENST00000406881 NXPE1Q8N323 547 aa4.68□□□□□ -1.66
PCDH11X-207ENST00000406881 FBXO30Q8TB52 745 aa4.68□□□□□ -1.66
PCDH11X-207ENST00000406881 LPGAT1Q92604 370 aa4.68□□□□□ -1.66
PCDH11X-207ENST00000406881 APOLD1Q96LR9 279 aa4.68□□□□□ -1.66
PCDH11X-207ENST00000406881 MGME1Q9BQP7 344 aa4.68□□□□□ -1.66
PCDH11X-207ENST00000406881 EBF4Q9BQW3 602 aa4.68□□□□□ -1.66
PCDH11X-207ENST00000406881 TTLL2Q9BWV7 592 aa4.68□□□□□ -1.66
PCDH11X-207ENST00000406881 SLC32A1Q9H598 525 aa4.68□□□□□ -1.66
PCDH11X-207ENST00000406881 PCDH12Q9NPG4 1184 aa4.68□□□□□ -1.66
PCDH11X-207ENST00000406881 TBC1D23Q9NUY8 699 aa4.68□□□□□ -1.66
PCDH11X-207ENST00000406881 ETAA1Q9NY74 926 aa4.68□□□□□ -1.66
PCDH11X-207ENST00000406881 USE1Q9NZ43 259 aa4.68□□□□□ -1.66
PCDH11X-207ENST00000406881 DHRS7Q9Y394 339 aa4.68□□□□□ -1.66
PCDH11X-207ENST00000406881 COLEC10Q9Y6Z7 277 aa4.68□□□□□ -1.66
PCDH11X-207ENST00000406881 SCN9AQ15858 1988 aa4.67□□□□□ -1.66
PCDH11X-207ENST00000406881 A0A0D9SEW6 157 aa4.67□□□□□ -1.66
PCDH11X-207ENST00000406881 ZCWPW2A0A1B0GU75 182 aa4.67□□□□□ -1.66
PCDH11X-207ENST00000406881 SMIM31A0A1B0GVY4 71 aa4.67□□□□□ -1.66
PCDH11X-207ENST00000406881 SSC5DA1L4H1 1573 aa4.67□□□□□ -1.66
PCDH11X-207ENST00000406881 AQP12BA6NM10 295 aa4.67□□□□□ -1.66
PCDH11X-207ENST00000406881 EIF3FO00303 357 aaPredicted RBP4.67□□□□□ -1.66
PCDH11X-207ENST00000406881 HS6ST1O60243 411 aa4.67□□□□□ -1.66
PCDH11X-207ENST00000406881 S1PR4O95977 384 aa4.67□□□□□ -1.66
PCDH11X-207ENST00000406881 PENKP01210 267 aaPredicted RBP4.67□□□□□ -1.66
PCDH11X-207ENST00000406881 TRBC1P01850 177 aa4.67□□□□□ -1.66
PCDH11X-207ENST00000406881 APOA1P02647 267 aa4.67□□□□□ -1.66
PCDH11X-207ENST00000406881 ITGB1P05556 798 aa4.67□□□□□ -1.66
PCDH11X-207ENST00000406881 GSTM1P09488 218 aa4.67□□□□□ -1.66
PCDH11X-207ENST00000406881 CHRM1P11229 460 aaPredicted RBP4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms