RNA–Protein interactions for RNA: ENST00000406757.2

GPC3-203, Transcript of glypican 3, humanhuman

TSL 2

Gene GPC3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-203ENST00000406757 OLFM1Q99784 485 aa8.23□□□□□ -1.09
GPC3-203ENST00000406757 MCMBPQ9BTE3 642 aa8.23□□□□□ -1.09
GPC3-203ENST00000406757 AARSD1Q9BTE6 412 aaKnown RBP8.23□□□□□ -1.09
GPC3-203ENST00000406757 TEX101Q9BY14 249 aa8.23□□□□□ -1.09
GPC3-203ENST00000406757 UNKQ9C0B0 810 aaKnown RBP8.23□□□□□ -1.09
GPC3-203ENST00000406757 CDH19Q9H159 772 aa8.23□□□□□ -1.09
GPC3-203ENST00000406757 P2RY12Q9H244 342 aa8.23□□□□□ -1.09
GPC3-203ENST00000406757 WDR26Q9H7D7 661 aa8.23□□□□□ -1.09
GPC3-203ENST00000406757 IL21RQ9HBE5 538 aa8.23□□□□□ -1.09
GPC3-203ENST00000406757 PHPT1Q9NRX4 125 aaPredicted RBP8.23□□□□□ -1.09
GPC3-203ENST00000406757 TM7SF3Q9NS93 570 aa8.23□□□□□ -1.09
GPC3-203ENST00000406757 PSMC3IPQ9P2W1 217 aaPredicted RBP8.23□□□□□ -1.09
GPC3-203ENST00000406757 NFKBIL1Q9UBC1 381 aaPredicted RBP8.23□□□□□ -1.09
GPC3-203ENST00000406757 SUSD2Q9UGT4 822 aa8.23□□□□□ -1.09
GPC3-203ENST00000406757 SLC24A2Q9UI40 661 aa8.23□□□□□ -1.09
GPC3-203ENST00000406757 PNMA8BQ9ULN7 279 aaPredicted RBP8.23□□□□□ -1.09
GPC3-203ENST00000406757 PLEKHM1Q9Y4G2 1056 aa8.23□□□□□ -1.09
GPC3-203ENST00000406757 CACNA1GO43497 2377 aa8.23□□□□□ -1.09
GPC3-203ENST00000406757 DSPP15924 2871 aaKnown RBP8.23□□□□□ -1.09
GPC3-203ENST00000406757 CEP192Q8TEP8 1941 aa8.23□□□□□ -1.09
GPC3-203ENST00000406757 FAM208BQ5VWN6 2430 aa8.22□□□□□ -1.09
GPC3-203ENST00000406757 C3orf80F5H4A9 247 aa8.22□□□□□ -1.09
GPC3-203ENST00000406757 PRMT5O14744 637 aaPredicted RBP8.22□□□□□ -1.09
GPC3-203ENST00000406757 TPP1O14773 563 aa8.22□□□□□ -1.09
GPC3-203ENST00000406757 RGS16O15492 202 aaPredicted RBP8.22□□□□□ -1.09
GPC3-203ENST00000406757 PHGDHO43175 533 aaKnown RBP8.22□□□□□ -1.09
GPC3-203ENST00000406757 SGTAO43765 313 aa8.22□□□□□ -1.09
GPC3-203ENST00000406757 TCEA3O75764 348 aa8.22□□□□□ -1.09
GPC3-203ENST00000406757 CEACAM5P06731 702 aa8.22□□□□□ -1.09
GPC3-203ENST00000406757 IVLP07476 585 aa8.22□□□□□ -1.09
GPC3-203ENST00000406757 THEGLP0DJG4 465 aa8.22□□□□□ -1.09
GPC3-203ENST00000406757 PKMP14618 531 aaKnown RBP8.22□□□□□ -1.09
GPC3-203ENST00000406757 CREB1P16220 341 aa8.22□□□□□ -1.09
GPC3-203ENST00000406757 ZNF7P17097 686 aaPredicted RBP8.22□□□□□ -1.09
GPC3-203ENST00000406757 KRT15P19012 456 aa8.22□□□□□ -1.09
GPC3-203ENST00000406757 CHRM3P20309 590 aa8.22□□□□□ -1.09
GPC3-203ENST00000406757 TRIM23P36406 574 aa8.22□□□□□ -1.09
GPC3-203ENST00000406757 CSNK1EP49674 416 aaKnown RBP8.22□□□□□ -1.09
GPC3-203ENST00000406757 LIMK2P53671 638 aa8.22□□□□□ -1.09
GPC3-203ENST00000406757 TAS2R39P59534 338 aa8.22□□□□□ -1.09
GPC3-203ENST00000406757 PFN3P60673 137 aa8.22□□□□□ -1.09
GPC3-203ENST00000406757 NAB1Q13506 487 aa8.22□□□□□ -1.09
GPC3-203ENST00000406757 ITIH4Q14624 930 aa8.22□□□□□ -1.09
GPC3-203ENST00000406757 USP10Q14694 798 aaKnown RBP8.22□□□□□ -1.09
GPC3-203ENST00000406757 LDLRAP1Q5SW96 308 aa8.22□□□□□ -1.09
GPC3-203ENST00000406757 ZNF449Q6P9G9 518 aa8.22□□□□□ -1.09
GPC3-203ENST00000406757 KIAA0408Q6ZU52 694 aa8.22□□□□□ -1.09
GPC3-203ENST00000406757 SLCO6A1Q86UG4 719 aa8.22□□□□□ -1.09
GPC3-203ENST00000406757 PHYKPLQ8IUZ5 450 aa8.22□□□□□ -1.09
GPC3-203ENST00000406757 LMNTD2Q8IXW0 634 aa8.22□□□□□ -1.09
GPC3-203ENST00000406757 RAVER1Q8IY67 606 aaKnown RBP8.22□□□□□ -1.09
GPC3-203ENST00000406757 RBFAQ8N0V3 343 aa8.22□□□□□ -1.09
GPC3-203ENST00000406757 SLC22A18ASQ8N1D0 253 aa8.22□□□□□ -1.09
GPC3-203ENST00000406757 SPATA6LQ8N4H0 392 aa8.22□□□□□ -1.09
GPC3-203ENST00000406757 LILRA3Q8N6C8 439 aaPredicted RBP8.22□□□□□ -1.09
GPC3-203ENST00000406757 SIDT2Q8NBJ9 832 aaKnown RBP8.22□□□□□ -1.09
GPC3-203ENST00000406757 TMEM145Q8NBT3 493 aa8.22□□□□□ -1.09
GPC3-203ENST00000406757 CADM4Q8NFZ8 388 aa8.22□□□□□ -1.09
GPC3-203ENST00000406757 GABPB2Q8TAK5 448 aaPredicted RBP8.22□□□□□ -1.09
GPC3-203ENST00000406757 DTX3LQ8TDB6 740 aa8.22□□□□□ -1.09
GPC3-203ENST00000406757 SETD7Q8WTS6 366 aaKnown RBP8.22□□□□□ -1.09
GPC3-203ENST00000406757 ADAMTS14Q8WXS8 1223 aa8.22□□□□□ -1.09
GPC3-203ENST00000406757 DNASE2BQ8WZ79 361 aa8.22□□□□□ -1.09
GPC3-203ENST00000406757 KLHDC7BQ96G42 594 aa8.22□□□□□ -1.09
GPC3-203ENST00000406757 TCF12Q99081 682 aa8.22□□□□□ -1.09
GPC3-203ENST00000406757 TTC1Q99614 292 aa8.22□□□□□ -1.09
GPC3-203ENST00000406757 C19orf43Q9BQ61 176 aa8.22□□□□□ -1.09
GPC3-203ENST00000406757 TMEM109Q9BVC6 243 aa8.22□□□□□ -1.09
GPC3-203ENST00000406757 ROPN1BQ9BZX4 212 aaPredicted RBP8.22□□□□□ -1.09
GPC3-203ENST00000406757 CLPBQ9H078 707 aa8.22□□□□□ -1.09
GPC3-203ENST00000406757 RHOJQ9H4E5 214 aa8.22□□□□□ -1.09
GPC3-203ENST00000406757 ROPN1Q9HAT0 212 aaPredicted RBP8.22□□□□□ -1.09
GPC3-203ENST00000406757 TMBIM4Q9HC24 238 aa8.22□□□□□ -1.09
GPC3-203ENST00000406757 TRIM39Q9HCM9 518 aa8.22□□□□□ -1.09
GPC3-203ENST00000406757 TM9SF3Q9HD45 589 aa8.22□□□□□ -1.09
GPC3-203ENST00000406757 INTS10Q9NVR2 710 aaKnown RBP8.22□□□□□ -1.09
GPC3-203ENST00000406757 SMOXQ9NWM0 555 aa8.22□□□□□ -1.09
GPC3-203ENST00000406757 NSMCE4AQ9NXX6 385 aa8.22□□□□□ -1.09
GPC3-203ENST00000406757 EURLQ9NYK6 297 aa8.22□□□□□ -1.09
GPC3-203ENST00000406757 ZNHIT2Q9UHR6 403 aa8.22□□□□□ -1.09
GPC3-203ENST00000406757 NOVA2Q9UNW9 492 aaKnown RBP8.22□□□□□ -1.09
GPC3-203ENST00000406757 MED16Q9Y2X0 877 aa8.22□□□□□ -1.09
GPC3-203ENST00000406757 VWA7Q9Y334 891 aa8.22□□□□□ -1.09
GPC3-203ENST00000406757 GPSM3Q9Y4H4 160 aa8.22□□□□□ -1.09
GPC3-203ENST00000406757 HS3ST3A1Q9Y663 406 aa8.22□□□□□ -1.09
GPC3-203ENST00000406757 IGLV3-16A0A075B6K0 115 aa8.21□□□□□ -1.1
GPC3-203ENST00000406757 IQANK1A0A1B0GTG1 560 aa8.21□□□□□ -1.1
GPC3-203ENST00000406757 A0A1B0GTW7 788 aa8.21□□□□□ -1.1
GPC3-203ENST00000406757 A0A1W2PR77 199 aa8.21□□□□□ -1.1
GPC3-203ENST00000406757 A6NNZ2 444 aa8.21□□□□□ -1.1
GPC3-203ENST00000406757 CFAP99D6REC4 459 aa8.21□□□□□ -1.1
GPC3-203ENST00000406757 CACNB4O00305 520 aaPredicted RBP8.21□□□□□ -1.1
GPC3-203ENST00000406757 PFDN6O15212 129 aa8.21□□□□□ -1.1
GPC3-203ENST00000406757 CBFA2T3O75081 653 aa8.21□□□□□ -1.1
GPC3-203ENST00000406757 CDH16O75309 829 aa8.21□□□□□ -1.1
GPC3-203ENST00000406757 SPAG7O75391 227 aa8.21□□□□□ -1.1
GPC3-203ENST00000406757 POP7O75817 140 aaKnown RBP8.21□□□□□ -1.1
GPC3-203ENST00000406757 SYF2O95926 243 aaKnown RBP8.21□□□□□ -1.1
GPC3-203ENST00000406757 MT-ND3P03897 115 aa8.21□□□□□ -1.1
GPC3-203ENST00000406757 SNRPAP09012 282 aaKnown RBP8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms