RNA–Protein interactions for RNA: ENST00000402105.7

HPS4-203, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best) BASIC

Gene HPS4, Length 3,562 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-203ENST00000402105 B3GALT4O96024 378 aa9.06□□□□□ -0.96
HPS4-203ENST00000402105 HSMCR30P0CW71 290 aa9.06□□□□□ -0.96
HPS4-203ENST00000402105 DBTP11182 482 aaKnown RBP9.06□□□□□ -0.96
HPS4-203ENST00000402105 CRHBPP24387 322 aa9.06□□□□□ -0.96
HPS4-203ENST00000402105 PSEN2P49810 448 aa9.06□□□□□ -0.96
HPS4-203ENST00000402105 GSTM4Q03013 218 aa9.06□□□□□ -0.96
HPS4-203ENST00000402105 TTC23Q5W5X9 447 aa9.06□□□□□ -0.96
HPS4-203ENST00000402105 DHRS4L2Q6PKH6 230 aa9.06□□□□□ -0.96
HPS4-203ENST00000402105 LGI2Q8N0V4 545 aa9.06□□□□□ -0.96
HPS4-203ENST00000402105 PGBD5Q8N414 524 aa9.06□□□□□ -0.96
HPS4-203ENST00000402105 ATAD1Q8NBU5 361 aa9.06□□□□□ -0.96
HPS4-203ENST00000402105 PROKR1Q8TCW9 393 aa9.06□□□□□ -0.96
HPS4-203ENST00000402105 TRUB1Q8WWH5 349 aaKnown RBP9.06□□□□□ -0.96
HPS4-203ENST00000402105 UBE2FQ969M7 185 aa9.06□□□□□ -0.96
HPS4-203ENST00000402105 CGREF1Q99674 301 aa9.06□□□□□ -0.96
HPS4-203ENST00000402105 ZYG11BQ9C0D3 744 aa9.06□□□□□ -0.96
HPS4-203ENST00000402105 AP5M1Q9H0R1 490 aa9.06□□□□□ -0.96
HPS4-203ENST00000402105 CARS2Q9HA77 564 aaKnown RBP9.06□□□□□ -0.96
HPS4-203ENST00000402105 NTN4Q9HB63 628 aa9.06□□□□□ -0.96
HPS4-203ENST00000402105 AIG1Q9NVV5 245 aa9.06□□□□□ -0.96
HPS4-203ENST00000402105 OSER1Q9NX31 292 aa9.06□□□□□ -0.96
HPS4-203ENST00000402105 CPQQ9Y646 472 aa9.06□□□□□ -0.96
HPS4-203ENST00000402105 TMEM221A6NGB7 291 aa9.05□□□□□ -0.96
HPS4-203ENST00000402105 PSMD11O00231 422 aa9.05□□□□□ -0.96
HPS4-203ENST00000402105 CXCL11O14625 94 aa9.05□□□□□ -0.96
HPS4-203ENST00000402105 TNPO2O14787 897 aaKnown RBP9.05□□□□□ -0.96
HPS4-203ENST00000402105 MUSKO15146 869 aa9.05□□□□□ -0.96
HPS4-203ENST00000402105 TBX1O43435 398 aa9.05□□□□□ -0.96
HPS4-203ENST00000402105 VPS26AO75436 327 aa9.05□□□□□ -0.96
HPS4-203ENST00000402105 ANGPTL1O95841 491 aa9.05□□□□□ -0.96
HPS4-203ENST00000402105 RAP2AP10114 183 aa9.05□□□□□ -0.96
HPS4-203ENST00000402105 SERPINB1P30740 379 aa9.05□□□□□ -0.96
HPS4-203ENST00000402105 CASP9P55211 416 aa9.05□□□□□ -0.96
HPS4-203ENST00000402105 ZNF846Q147U1 533 aa9.05□□□□□ -0.96
HPS4-203ENST00000402105 CRY1Q16526 586 aa9.05□□□□□ -0.96
HPS4-203ENST00000402105 ZNF792Q3KQV3 632 aa9.05□□□□□ -0.96
HPS4-203ENST00000402105 CYP20A1Q6UW02 462 aa9.05□□□□□ -0.96
HPS4-203ENST00000402105 ANGPTL8Q6UXH0 198 aa9.05□□□□□ -0.96
HPS4-203ENST00000402105 RBM23Q86U06 439 aaKnown RBP9.05□□□□□ -0.96
HPS4-203ENST00000402105 ZNF598Q86UK7 904 aaKnown RBP9.05□□□□□ -0.96
HPS4-203ENST00000402105 NLGN2Q8NFZ4 835 aa9.05□□□□□ -0.96
HPS4-203ENST00000402105 OR6K2Q8NGY2 324 aa9.05□□□□□ -0.96
HPS4-203ENST00000402105 NPLOC4Q8TAT6 608 aa9.05□□□□□ -0.96
HPS4-203ENST00000402105 SEPT5Q99719 369 aaPredicted RBP9.05□□□□□ -0.96
HPS4-203ENST00000402105 LATS2Q9NRM7 1088 aa9.05□□□□□ -0.96
HPS4-203ENST00000402105 FARSBQ9NSD9 589 aaKnown RBP9.05□□□□□ -0.96
HPS4-203ENST00000402105 GMIPQ9P107 970 aa9.05□□□□□ -0.96
HPS4-203ENST00000402105 KIF17Q9P2E2 1029 aa9.05□□□□□ -0.96
HPS4-203ENST00000402105 FKBPLQ9UIM3 349 aa9.05□□□□□ -0.96
HPS4-203ENST00000402105 POU2F3Q9UKI9 436 aa9.05□□□□□ -0.96
HPS4-203ENST00000402105 NUP214P35658 2090 aaPredicted RBP9.05□□□□□ -0.96
HPS4-203ENST00000402105 COL1A2P08123 1366 aa9.05□□□□□ -0.96
HPS4-203ENST00000402105 LOC100130705A0A1B0GUX0 176 aa9.05□□□□□ -0.96
HPS4-203ENST00000402105 TCRBV5S2A0A599 114 aa9.05□□□□□ -0.96
HPS4-203ENST00000402105 HTR3EA5X5Y0 456 aa9.05□□□□□ -0.96
HPS4-203ENST00000402105 RPP40O75818 363 aaKnown RBP9.05□□□□□ -0.96
HPS4-203ENST00000402105 OXSR1O95747 527 aaPredicted RBP9.05□□□□□ -0.96
HPS4-203ENST00000402105 SERPINA1P01009 418 aa9.05□□□□□ -0.96
HPS4-203ENST00000402105 S100BP04271 92 aaPredicted RBP9.05□□□□□ -0.96
HPS4-203ENST00000402105 SERPINF2P08697 491 aa9.05□□□□□ -0.96
HPS4-203ENST00000402105 CDH1P12830 882 aa9.05□□□□□ -0.96
HPS4-203ENST00000402105 PFKLP17858 780 aa9.05□□□□□ -0.96
HPS4-203ENST00000402105 CSRP3P50461 194 aa9.05□□□□□ -0.96
HPS4-203ENST00000402105 TMBIM6P55061 237 aa9.05□□□□□ -0.96
HPS4-203ENST00000402105 MLLT6P55198 1093 aaPredicted RBP9.05□□□□□ -0.96
HPS4-203ENST00000402105 ERVPABLB-1P60509 514 aa9.05□□□□□ -0.96
HPS4-203ENST00000402105 IL2P60568 153 aa9.05□□□□□ -0.96
HPS4-203ENST00000402105 ADARB1P78563 741 aaKnown RBP9.05□□□□□ -0.96
HPS4-203ENST00000402105 MAPRE1Q15691 268 aaKnown RBP9.05□□□□□ -0.96
HPS4-203ENST00000402105 SMYD5Q6GMV2 418 aa9.05□□□□□ -0.96
HPS4-203ENST00000402105 FBXL22Q6P050 247 aa9.05□□□□□ -0.96
HPS4-203ENST00000402105 LINGO4Q6UY18 593 aa9.05□□□□□ -0.96
HPS4-203ENST00000402105 BHLHA9Q7RTU4 235 aa9.05□□□□□ -0.96
HPS4-203ENST00000402105 GPR142Q7Z601 462 aa9.05□□□□□ -0.96
HPS4-203ENST00000402105 PROSER1Q86XN7 944 aa9.05□□□□□ -0.96
HPS4-203ENST00000402105 EID3Q8N140 333 aa9.05□□□□□ -0.96
HPS4-203ENST00000402105 POC5Q8NA72 575 aa9.05□□□□□ -0.96
HPS4-203ENST00000402105 ATOH8Q96SQ7 321 aa9.05□□□□□ -0.96
HPS4-203ENST00000402105 DPY30Q9C005 99 aa9.05□□□□□ -0.96
HPS4-203ENST00000402105 AMBRA1Q9C0C7 1298 aa9.05□□□□□ -0.96
HPS4-203ENST00000402105 POLR1EQ9GZS1 481 aaKnown RBP9.05□□□□□ -0.96
HPS4-203ENST00000402105 ABHD16BQ9H3Z7 469 aa9.05□□□□□ -0.96
HPS4-203ENST00000402105 PKP3Q9Y446 797 aa9.05□□□□□ -0.96
HPS4-203ENST00000402105 GPC6Q9Y625 555 aaPredicted RBP9.05□□□□□ -0.96
HPS4-203ENST00000402105 PTCH2Q9Y6C5 1203 aa9.05□□□□□ -0.96
HPS4-203ENST00000402105 LAMA3Q16787 3333 aa9.05□□□□□ -0.96
HPS4-203ENST00000402105 ANK1P16157 1881 aa9.05□□□□□ -0.96
HPS4-203ENST00000402105 CCL15-CCL14A0A0B4J2E2 113 aa9.04□□□□□ -0.96
HPS4-203ENST00000402105 SMIM35A0A1B0GVV1 85 aa9.04□□□□□ -0.96
HPS4-203ENST00000402105 FAM20BO75063 409 aa9.04□□□□□ -0.96
HPS4-203ENST00000402105 ALPLP05186 524 aa9.04□□□□□ -0.96
HPS4-203ENST00000402105 UROSP10746 265 aa9.04□□□□□ -0.96
HPS4-203ENST00000402105 CTPS1P17812 591 aa9.04□□□□□ -0.96
HPS4-203ENST00000402105 FDXRP22570 491 aa9.04□□□□□ -0.96
HPS4-203ENST00000402105 AQP1P29972 269 aa9.04□□□□□ -0.96
HPS4-203ENST00000402105 ERVK-8P63133 956 aa9.04□□□□□ -0.96
HPS4-203ENST00000402105 FAM189BP81408 668 aa9.04□□□□□ -0.96
HPS4-203ENST00000402105 RCAN2Q14206 197 aa9.04□□□□□ -0.96
HPS4-203ENST00000402105 ABRAXAS2Q15018 415 aa9.04□□□□□ -0.96
HPS4-203ENST00000402105 CPSF6Q16630 551 aaKnown RBP eCLIP9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms