RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 FAR1Q8WVX9 515 aa16.87■□□□□ 0.29
PTPRA-205ENST00000399903 LGALS12Q96DT0 336 aa16.87■□□□□ 0.29
PTPRA-205ENST00000399903 TMEM246Q9BRR3 403 aa16.87■□□□□ 0.29
PTPRA-205ENST00000399903 BEX2Q9BXY8 128 aa16.87■□□□□ 0.29
PTPRA-205ENST00000399903 IRF2BPLQ9H1B7 796 aa16.87■□□□□ 0.29
PTPRA-205ENST00000399903 MOV10Q9HCE1 1003 aaKnown RBP16.87■□□□□ 0.29
PTPRA-205ENST00000399903 TMEM30AQ9NV96 361 aa16.87■□□□□ 0.29
PTPRA-205ENST00000399903 C14orf119Q9NWQ9 140 aa16.87■□□□□ 0.29
PTPRA-205ENST00000399903 HACD3Q9P035 362 aa16.87■□□□□ 0.29
PTPRA-205ENST00000399903 TESMINQ9Y4I5 508 aa16.87■□□□□ 0.29
PTPRA-205ENST00000399903 HOXC11O43248 304 aaPredicted RBP16.87■□□□□ 0.29
PTPRA-205ENST00000399903 GOT2P00505 430 aaKnown RBP16.87■□□□□ 0.29
PTPRA-205ENST00000399903 DNTTP04053 509 aa16.87■□□□□ 0.29
PTPRA-205ENST00000399903 HOXD8P13378 290 aaPredicted RBP16.87■□□□□ 0.29
PTPRA-205ENST00000399903 SCNN1GP51170 649 aa16.87■□□□□ 0.29
PTPRA-205ENST00000399903 CLCNKBP51801 687 aa16.87■□□□□ 0.29
PTPRA-205ENST00000399903 KYAT1Q16773 422 aa16.87■□□□□ 0.29
PTPRA-205ENST00000399903 ZNF678Q5SXM1 525 aa16.87■□□□□ 0.29
PTPRA-205ENST00000399903 RAB44Q7Z6P3 723 aaPredicted RBP16.87■□□□□ 0.29
PTPRA-205ENST00000399903 LEMD2Q8NC56 503 aa16.87■□□□□ 0.29
PTPRA-205ENST00000399903 CENPIQ92674 756 aaPredicted RBP16.87■□□□□ 0.29
PTPRA-205ENST00000399903 ARPC5LQ9BPX5 153 aa16.87■□□□□ 0.29
PTPRA-205ENST00000399903 TRPV5Q9NQA5 729 aa16.87■□□□□ 0.29
PTPRA-205ENST00000399903 PLSCR3Q9NRY6 295 aa16.87■□□□□ 0.29
PTPRA-205ENST00000399903 ST3GAL5Q9UNP4 418 aa16.87■□□□□ 0.29
PTPRA-205ENST00000399903 FNDC3AQ9Y2H6 1198 aaKnown RBP16.87■□□□□ 0.29
PTPRA-205ENST00000399903 MYBPHLA2RUH7 354 aa16.86■□□□□ 0.29
PTPRA-205ENST00000399903 MYO1GB0I1T2 1018 aa16.86■□□□□ 0.29
PTPRA-205ENST00000399903 SUPT3HB4E1H0 165 aa16.86■□□□□ 0.29
PTPRA-205ENST00000399903 CYP7B1O75881 506 aa16.86■□□□□ 0.29
PTPRA-205ENST00000399903 CD36P16671 472 aa16.86■□□□□ 0.29
PTPRA-205ENST00000399903 PAMP19021 973 aa16.86■□□□□ 0.29
PTPRA-205ENST00000399903 IMPDH1P20839 514 aa16.86■□□□□ 0.29
PTPRA-205ENST00000399903 GGT5P36269 586 aa16.86■□□□□ 0.29
PTPRA-205ENST00000399903 DGKQP52824 942 aa16.86■□□□□ 0.29
PTPRA-205ENST00000399903 MADCAM1Q13477 382 aa16.86■□□□□ 0.29
PTPRA-205ENST00000399903 GTF2H3Q13889 308 aa16.86■□□□□ 0.29
PTPRA-205ENST00000399903 HECTD2Q5U5R9 776 aa16.86■□□□□ 0.29
PTPRA-205ENST00000399903 KCTD11Q693B1 232 aa16.86■□□□□ 0.29
PTPRA-205ENST00000399903 NEK5Q6P3R8 708 aa16.86■□□□□ 0.29
PTPRA-205ENST00000399903 GALNT13Q8IUC8 556 aa16.86■□□□□ 0.29
PTPRA-205ENST00000399903 SLC22A9Q8IVM8 553 aa16.86■□□□□ 0.29
PTPRA-205ENST00000399903 RHOXF1Q8NHV9 184 aa16.86■□□□□ 0.29
PTPRA-205ENST00000399903 AMBNQ9NP70 447 aa16.86■□□□□ 0.29
PTPRA-205ENST00000399903 ENTPD7Q9NQZ7 604 aa16.86■□□□□ 0.29
PTPRA-205ENST00000399903 STAP1Q9ULZ2 295 aa16.86■□□□□ 0.29
PTPRA-205ENST00000399903 N6AMT1Q9Y5N5 214 aa16.86■□□□□ 0.29
PTPRA-205ENST00000399903 UPK1BO75841 260 aa16.86■□□□□ 0.29
PTPRA-205ENST00000399903 RECQL5O94762 991 aaPredicted RBP16.86■□□□□ 0.29
PTPRA-205ENST00000399903 ARNTP27540 789 aa16.86■□□□□ 0.29
PTPRA-205ENST00000399903 POU4F1Q01851 419 aa16.86■□□□□ 0.29
PTPRA-205ENST00000399903 AAK1Q2M2I8 961 aa16.86■□□□□ 0.29
PTPRA-205ENST00000399903 ATP6AP1LQ52LC2 224 aa16.86■□□□□ 0.29
PTPRA-205ENST00000399903 TRAF7Q6Q0C0 670 aa16.86■□□□□ 0.29
PTPRA-205ENST00000399903 BLOC1S3Q6QNY0 202 aa16.86■□□□□ 0.29
PTPRA-205ENST00000399903 GPRIN1Q7Z2K8 1008 aa16.86■□□□□ 0.29
PTPRA-205ENST00000399903 ASCC1Q8N9N2 400 aaKnown RBP16.86■□□□□ 0.29
PTPRA-205ENST00000399903 FAM162AQ96A26 154 aa16.86■□□□□ 0.29
PTPRA-205ENST00000399903 COQ7Q99807 217 aa16.86■□□□□ 0.29
PTPRA-205ENST00000399903 KIFC1Q9BW19 673 aa16.86■□□□□ 0.29
PTPRA-205ENST00000399903 DCSTAMPQ9H295 470 aa16.86■□□□□ 0.29
PTPRA-205ENST00000399903 GABRQQ9UN88 632 aa16.86■□□□□ 0.29
PTPRA-205ENST00000399903 TTC34A8MYJ7 566 aa16.86■□□□□ 0.29
PTPRA-205ENST00000399903 EFCAB9A8MZ26 197 aa16.86■□□□□ 0.29
PTPRA-205ENST00000399903 LCKP06239 509 aa16.86■□□□□ 0.29
PTPRA-205ENST00000399903 PURAQ00577 322 aaKnown RBP16.86■□□□□ 0.29
PTPRA-205ENST00000399903 CRHR2Q13324 411 aa16.86■□□□□ 0.29
PTPRA-205ENST00000399903 RAPSNQ13702 412 aa16.86■□□□□ 0.29
PTPRA-205ENST00000399903 ZFP69Q49AA0 526 aa16.86■□□□□ 0.29
PTPRA-205ENST00000399903 GDF6Q6KF10 455 aaPredicted RBP16.86■□□□□ 0.29
PTPRA-205ENST00000399903 FKBP9P1Q75LS8 142 aa16.86■□□□□ 0.29
PTPRA-205ENST00000399903 FNDC5Q8NAU1 212 aa16.86■□□□□ 0.29
PTPRA-205ENST00000399903 TXNDC15Q96J42 360 aa16.86■□□□□ 0.29
PTPRA-205ENST00000399903 TEKT5Q96M29 485 aa16.86■□□□□ 0.29
PTPRA-205ENST00000399903 SLC45A1Q9Y2W3 748 aa16.86■□□□□ 0.29
PTPRA-205ENST00000399903 PDE4DIPQ5VU43 2346 aa16.86■□□□□ 0.29
PTPRA-205ENST00000399903 A0A1W2PP18 115 aa16.85■□□□□ 0.29
PTPRA-205ENST00000399903 BCKDKO14874 412 aa16.85■□□□□ 0.29
PTPRA-205ENST00000399903 DCLK1O15075 740 aa16.85■□□□□ 0.29
PTPRA-205ENST00000399903 APOA1P02647 267 aa16.85■□□□□ 0.29
PTPRA-205ENST00000399903 MT-ND2P03891 347 aa16.85■□□□□ 0.29
PTPRA-205ENST00000399903 CPT1AP50416 773 aa16.85■□□□□ 0.29
PTPRA-205ENST00000399903 OR8H2Q8N162 312 aa16.85■□□□□ 0.29
PTPRA-205ENST00000399903 LRRC52Q8N7C0 313 aa16.85■□□□□ 0.29
PTPRA-205ENST00000399903 VMP1Q96GC9 406 aa16.85■□□□□ 0.29
PTPRA-205ENST00000399903 TRIM54Q9BYV2 358 aa16.85■□□□□ 0.29
PTPRA-205ENST00000399903 TUBB1Q9H4B7 451 aa16.85■□□□□ 0.29
PTPRA-205ENST00000399903 AGO3Q9H9G7 860 aaKnown RBP16.85■□□□□ 0.29
PTPRA-205ENST00000399903 THG1LQ9NWX6 298 aaKnown RBP16.85■□□□□ 0.29
PTPRA-205ENST00000399903 SNX8Q9Y5X2 465 aa16.85■□□□□ 0.29
PTPRA-205ENST00000399903 ZNF638Q14966 1978 aaKnown RBP16.85■□□□□ 0.29
PTPRA-205ENST00000399903 TTC3P53804 2025 aa16.85■□□□□ 0.29
PTPRA-205ENST00000399903 AP3D1O14617 1153 aa16.85■□□□□ 0.29
PTPRA-205ENST00000399903 PRMT5O14744 637 aaPredicted RBP16.85■□□□□ 0.29
PTPRA-205ENST00000399903 MGEA5O60502 916 aa16.85■□□□□ 0.29
PTPRA-205ENST00000399903 SLC22A3O75751 556 aa16.85■□□□□ 0.29
PTPRA-205ENST00000399903 CD4P01730 458 aa16.85■□□□□ 0.29
PTPRA-205ENST00000399903 UMPSP11172 480 aa16.85■□□□□ 0.29
PTPRA-205ENST00000399903 PTPN2P17706 415 aa16.85■□□□□ 0.29
PTPRA-205ENST00000399903 ITIH1P19827 911 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms