RNA–Protein interactions for RNA: ENST00000399349.5

ITSN1-208, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 5,191 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-208ENST00000399349 ZNF554Q86TJ5 538 aa13.03□□□□□ -0.32
ITSN1-208ENST00000399349 CNTD1Q8N815 330 aa13.03□□□□□ -0.32
ITSN1-208ENST00000399349 TIFAQ96CG3 184 aa13.03□□□□□ -0.32
ITSN1-208ENST00000399349 MTERF1Q99551 399 aaKnown RBP13.03□□□□□ -0.32
ITSN1-208ENST00000399349 ACBD6Q9BR61 282 aa13.03□□□□□ -0.32
ITSN1-208ENST00000399349 AMBNQ9NP70 447 aa13.03□□□□□ -0.32
ITSN1-208ENST00000399349 NKX1-2Q9UD57 310 aaPredicted RBP13.03□□□□□ -0.32
ITSN1-208ENST00000399349 MSRAQ9UJ68 235 aa13.03□□□□□ -0.32
ITSN1-208ENST00000399349 POMPQ9Y244 141 aa13.03□□□□□ -0.32
ITSN1-208ENST00000399349 MROH1Q8NDA8 1641 aa13.03□□□□□ -0.32
ITSN1-208ENST00000399349 NOS1APO75052 506 aaPredicted RBP13.03□□□□□ -0.32
ITSN1-208ENST00000399349 PCCBP05166 539 aa13.03□□□□□ -0.32
ITSN1-208ENST00000399349 LAMP2P13473 410 aa13.03□□□□□ -0.32
ITSN1-208ENST00000399349 IL1R2P27930 398 aa13.03□□□□□ -0.32
ITSN1-208ENST00000399349 XIAPP98170 497 aa13.03□□□□□ -0.32
ITSN1-208ENST00000399349 PPP2R2BQ00005 443 aa13.03□□□□□ -0.32
ITSN1-208ENST00000399349 NOGQ13253 232 aa13.03□□□□□ -0.32
ITSN1-208ENST00000399349 OGFOD2Q6N063 350 aa13.03□□□□□ -0.32
ITSN1-208ENST00000399349 LRP10Q7Z4F1 713 aa13.03□□□□□ -0.32
ITSN1-208ENST00000399349 UBE2J2Q8N2K1 259 aa13.03□□□□□ -0.32
ITSN1-208ENST00000399349 SMG7Q92540 1137 aaKnown RBP13.03□□□□□ -0.32
ITSN1-208ENST00000399349 ZNF516Q92618 1163 aa13.03□□□□□ -0.32
ITSN1-208ENST00000399349 PREBQ9HCU5 417 aa13.03□□□□□ -0.32
ITSN1-208ENST00000399349 MAT2AP31153 395 aaKnown RBP13.03□□□□□ -0.32
ITSN1-208ENST00000399349 PIK3R6Q5UE93 754 aa13.03□□□□□ -0.32
ITSN1-208ENST00000399349 ATP6V1C2Q8NEY4 427 aa13.03□□□□□ -0.32
ITSN1-208ENST00000399349 OR13C4Q8NGS5 318 aa13.03□□□□□ -0.32
ITSN1-208ENST00000399349 S100ZQ8WXG8 99 aa13.03□□□□□ -0.32
ITSN1-208ENST00000399349 PYCR2Q96C36 320 aa13.03□□□□□ -0.32
ITSN1-208ENST00000399349 CDK15Q96Q40 435 aa13.03□□□□□ -0.32
ITSN1-208ENST00000399349 COPS4Q9BT78 406 aa13.03□□□□□ -0.32
ITSN1-208ENST00000399349 TLE6Q9H808 572 aa13.03□□□□□ -0.32
ITSN1-208ENST00000399349 PHPT1Q9NRX4 125 aaPredicted RBP13.03□□□□□ -0.32
ITSN1-208ENST00000399349 FBXW2Q9UKT8 454 aa13.03□□□□□ -0.32
ITSN1-208ENST00000399349 ARL5AQ9Y689 179 aa13.03□□□□□ -0.32
ITSN1-208ENST00000399349 MYO9BQ13459 2157 aa13.02□□□□□ -0.32
ITSN1-208ENST00000399349 C9P02748 559 aa13.02□□□□□ -0.32
ITSN1-208ENST00000399349 RLN1P04808 185 aa13.02□□□□□ -0.32
ITSN1-208ENST00000399349 FABP3P05413 133 aa13.02□□□□□ -0.32
ITSN1-208ENST00000399349 NT5EP21589 574 aa13.02□□□□□ -0.32
ITSN1-208ENST00000399349 ALAS2P22557 587 aa13.02□□□□□ -0.32
ITSN1-208ENST00000399349 TCEA1P23193 301 aaKnown RBP13.02□□□□□ -0.32
ITSN1-208ENST00000399349 PAX3P23760 479 aa13.02□□□□□ -0.32
ITSN1-208ENST00000399349 SULT2A1Q06520 285 aa13.02□□□□□ -0.32
ITSN1-208ENST00000399349 RTL4Q6ZR62 310 aa13.02□□□□□ -0.32
ITSN1-208ENST00000399349 PIGKQ92643 395 aa13.02□□□□□ -0.32
ITSN1-208ENST00000399349 C11orf24Q96F05 449 aaPredicted RBP13.02□□□□□ -0.32
ITSN1-208ENST00000399349 ZNF317Q96PQ6 595 aaPredicted RBP13.02□□□□□ -0.32
ITSN1-208ENST00000399349 TRNT1Q96Q11 434 aaKnown RBP13.02□□□□□ -0.32
ITSN1-208ENST00000399349 TMEM109Q9BVC6 243 aa13.02□□□□□ -0.32
ITSN1-208ENST00000399349 ZNF395Q9H8N7 513 aaPredicted RBP13.02□□□□□ -0.32
ITSN1-208ENST00000399349 PRDM8Q9NQV8 689 aa13.02□□□□□ -0.32
ITSN1-208ENST00000399349 CNTN6Q9UQ52 1028 aa13.02□□□□□ -0.32
ITSN1-208ENST00000399349 MRPS33Q9Y291 106 aaKnown RBP13.02□□□□□ -0.32
ITSN1-208ENST00000399349 RBM7Q9Y580 266 aaKnown RBP13.02□□□□□ -0.32
ITSN1-208ENST00000399349 TMEM131LA2VDJ0 1609 aa13.02□□□□□ -0.32
ITSN1-208ENST00000399349 NOBOXO60393 691 aa13.02□□□□□ -0.32
ITSN1-208ENST00000399349 TRMUO75648 421 aaKnown RBP13.02□□□□□ -0.32
ITSN1-208ENST00000399349 SELPP16109 830 aa13.02□□□□□ -0.32
ITSN1-208ENST00000399349 ASPAP45381 313 aa13.02□□□□□ -0.32
ITSN1-208ENST00000399349 RGS8P57771 180 aaPredicted RBP13.02□□□□□ -0.32
ITSN1-208ENST00000399349 RPS24P62847 133 aaKnown RBP13.02□□□□□ -0.32
ITSN1-208ENST00000399349 HNRNPDQ14103 355 aaKnown RBP13.02□□□□□ -0.32
ITSN1-208ENST00000399349 SOWAHAQ2M3V2 549 aa13.02□□□□□ -0.32
ITSN1-208ENST00000399349 EGFLAMQ63HQ2 1017 aa13.02□□□□□ -0.32
ITSN1-208ENST00000399349 OLFML2AQ68BL7 652 aa13.02□□□□□ -0.32
ITSN1-208ENST00000399349 FAM129CQ86XR2 697 aa13.02□□□□□ -0.32
ITSN1-208ENST00000399349 ZNF384Q8TF68 577 aa13.02□□□□□ -0.32
ITSN1-208ENST00000399349 EBF3Q9H4W6 596 aa13.02□□□□□ -0.32
ITSN1-208ENST00000399349 A0A0G2JN53 185 aa13.02□□□□□ -0.33
ITSN1-208ENST00000399349 FAM240BA0A1B0GVZ2 78 aa13.02□□□□□ -0.33
ITSN1-208ENST00000399349 TOR1BO14657 336 aa13.02□□□□□ -0.33
ITSN1-208ENST00000399349 SIX3O95343 332 aaPredicted RBP13.02□□□□□ -0.33
ITSN1-208ENST00000399349 ECDO95905 644 aaPredicted RBP13.02□□□□□ -0.33
ITSN1-208ENST00000399349 UROSP10746 265 aa13.02□□□□□ -0.33
ITSN1-208ENST00000399349 GPD2P43304 727 aa13.02□□□□□ -0.33
ITSN1-208ENST00000399349 HNMTP50135 292 aa13.02□□□□□ -0.33
ITSN1-208ENST00000399349 MAPK12P53778 367 aa13.02□□□□□ -0.33
ITSN1-208ENST00000399349 PLA2G16P53816 162 aa13.02□□□□□ -0.33
ITSN1-208ENST00000399349 CREMQ03060 361 aa13.02□□□□□ -0.33
ITSN1-208ENST00000399349 MINDY4Q4G0A6 757 aa13.02□□□□□ -0.33
ITSN1-208ENST00000399349 PTCD2Q8WV60 388 aaKnown RBP13.02□□□□□ -0.33
ITSN1-208ENST00000399349 AP3S1Q92572 193 aa13.02□□□□□ -0.33
ITSN1-208ENST00000399349 PIWIL1Q96J94 861 aaKnown RBP13.02□□□□□ -0.33
ITSN1-208ENST00000399349 PHF11Q9UIL8 331 aa13.02□□□□□ -0.33
ITSN1-208ENST00000399349 FZD10Q9ULW2 581 aa13.02□□□□□ -0.33
ITSN1-208ENST00000399349 MTTPP55157 894 aa13.02□□□□□ -0.33
ITSN1-208ENST00000399349 PPP1R8Q12972 351 aaKnown RBP13.02□□□□□ -0.33
ITSN1-208ENST00000399349 SLC9B1Q4ZJI4 515 aa13.02□□□□□ -0.33
ITSN1-208ENST00000399349 PLET1Q6UQ28 207 aa13.02□□□□□ -0.33
ITSN1-208ENST00000399349 CHST15Q7LFX5 561 aaPredicted RBP13.02□□□□□ -0.33
ITSN1-208ENST00000399349 SLC51AQ86UW1 340 aa13.02□□□□□ -0.33
ITSN1-208ENST00000399349 LMLNQ96KR4 655 aa13.02□□□□□ -0.33
ITSN1-208ENST00000399349 RBM4BQ9BQ04 359 aaKnown RBP13.02□□□□□ -0.33
ITSN1-208ENST00000399349 RBM4Q9BWF3 364 aaKnown RBP13.02□□□□□ -0.33
ITSN1-208ENST00000399349 FBXW11Q9UKB1 542 aa13.02□□□□□ -0.33
ITSN1-208ENST00000399349 FKTNO75072 461 aa13.01□□□□□ -0.33
ITSN1-208ENST00000399349 UGT2B11O75310 529 aa13.01□□□□□ -0.33
ITSN1-208ENST00000399349 IFNW1P05000 195 aa13.01□□□□□ -0.33
ITSN1-208ENST00000399349 CLK3P49761 638 aaKnown RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms