RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 HALP42357 657 aa13.8□□□□□ -0.2
HLA-DQB1-202ENST00000399079 SQSTM1Q13501 440 aa13.8□□□□□ -0.2
HLA-DQB1-202ENST00000399079 C16orf72Q14CZ0 275 aa13.8□□□□□ -0.2
HLA-DQB1-202ENST00000399079 RPE65Q16518 533 aa13.8□□□□□ -0.2
HLA-DQB1-202ENST00000399079 AFTPHQ6ULP2 937 aa13.8□□□□□ -0.2
HLA-DQB1-202ENST00000399079 TMEM26Q6ZUK4 368 aa13.8□□□□□ -0.2
HLA-DQB1-202ENST00000399079 RAB11FIP2Q7L804 512 aa13.8□□□□□ -0.2
HLA-DQB1-202ENST00000399079 LDB1Q86U70 411 aaPredicted RBP13.8□□□□□ -0.2
HLA-DQB1-202ENST00000399079 MPP5Q8N3R9 675 aa13.8□□□□□ -0.2
HLA-DQB1-202ENST00000399079 GPR150Q8NGU9 434 aa13.8□□□□□ -0.2
HLA-DQB1-202ENST00000399079 GRK7Q8WTQ7 553 aa13.8□□□□□ -0.2
HLA-DQB1-202ENST00000399079 HEXDCQ8WVB3 486 aa13.8□□□□□ -0.2
HLA-DQB1-202ENST00000399079 CXorf40BQ96DE9 158 aa13.8□□□□□ -0.2
HLA-DQB1-202ENST00000399079 MFSD3Q96ES6 412 aa13.8□□□□□ -0.2
HLA-DQB1-202ENST00000399079 CCDC74BQ96LY2 380 aa13.8□□□□□ -0.2
HLA-DQB1-202ENST00000399079 SLC46A1Q96NT5 459 aa13.8□□□□□ -0.2
HLA-DQB1-202ENST00000399079 TRIM56Q9BRZ2 755 aaKnown RBP13.8□□□□□ -0.2
HLA-DQB1-202ENST00000399079 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.8□□□□□ -0.2
HLA-DQB1-202ENST00000399079 STRADBQ9C0K7 418 aa13.8□□□□□ -0.2
HLA-DQB1-202ENST00000399079 WWP1Q9H0M0 922 aa13.8□□□□□ -0.2
HLA-DQB1-202ENST00000399079 ASCL3Q9NQ33 180 aa13.8□□□□□ -0.2
HLA-DQB1-202ENST00000399079 TREX1Q9NSU2 369 aa13.8□□□□□ -0.2
HLA-DQB1-202ENST00000399079 MARCH4Q9P2E8 410 aaPredicted RBP13.8□□□□□ -0.2
HLA-DQB1-202ENST00000399079 CACNA1BQ00975 2339 aa13.8□□□□□ -0.2
HLA-DQB1-202ENST00000399079 AP3B1O00203 1094 aa13.8□□□□□ -0.2
HLA-DQB1-202ENST00000399079 DUX1O43812 170 aa13.8□□□□□ -0.2
HLA-DQB1-202ENST00000399079 TNFSF15O95150 251 aa13.8□□□□□ -0.2
HLA-DQB1-202ENST00000399079 ITIH1P19827 911 aa13.8□□□□□ -0.2
HLA-DQB1-202ENST00000399079 NSG1P42857 185 aa13.8□□□□□ -0.2
HLA-DQB1-202ENST00000399079 LIMK2P53671 638 aa13.8□□□□□ -0.2
HLA-DQB1-202ENST00000399079 GPR18Q14330 331 aa13.8□□□□□ -0.2
HLA-DQB1-202ENST00000399079 PPP1R7Q15435 360 aa13.8□□□□□ -0.2
HLA-DQB1-202ENST00000399079 TBC1D25Q3MII6 688 aa13.8□□□□□ -0.2
HLA-DQB1-202ENST00000399079 FASTKD1Q53R41 847 aaKnown RBP13.8□□□□□ -0.2
HLA-DQB1-202ENST00000399079 SNAP47Q5SQN1 464 aa13.8□□□□□ -0.2
HLA-DQB1-202ENST00000399079 DUS1LQ6P1R4 473 aaKnown RBP13.8□□□□□ -0.2
HLA-DQB1-202ENST00000399079 TMEM71Q6P5X7 295 aa13.8□□□□□ -0.2
HLA-DQB1-202ENST00000399079 KLHL7Q8IXQ5 586 aa13.8□□□□□ -0.2
HLA-DQB1-202ENST00000399079 FBXO39Q8N4B4 442 aa13.8□□□□□ -0.2
HLA-DQB1-202ENST00000399079 AVL9Q8NBF6 648 aa13.8□□□□□ -0.2
HLA-DQB1-202ENST00000399079 OR4D9Q8NGE8 314 aa13.8□□□□□ -0.2
HLA-DQB1-202ENST00000399079 JPH3Q8WXH2 748 aaPredicted RBP13.8□□□□□ -0.2
HLA-DQB1-202ENST00000399079 PEX13Q92968 403 aa13.8□□□□□ -0.2
HLA-DQB1-202ENST00000399079 DCBLD2Q96PD2 775 aa13.8□□□□□ -0.2
HLA-DQB1-202ENST00000399079 INSM2Q96T92 566 aaPredicted RBP13.8□□□□□ -0.2
HLA-DQB1-202ENST00000399079 KIFC1Q9BW19 673 aa13.8□□□□□ -0.2
HLA-DQB1-202ENST00000399079 KCND1Q9NSA2 647 aa13.8□□□□□ -0.2
HLA-DQB1-202ENST00000399079 POT1Q9NUX5 634 aa13.8□□□□□ -0.2
HLA-DQB1-202ENST00000399079 IMP3Q9NV31 184 aaKnown RBP13.8□□□□□ -0.2
HLA-DQB1-202ENST00000399079 OGFRQ9NZT2 677 aa13.8□□□□□ -0.2
HLA-DQB1-202ENST00000399079 PCYOX1Q9UHG3 505 aa13.8□□□□□ -0.2
HLA-DQB1-202ENST00000399079 LOXL2Q9Y4K0 774 aa13.8□□□□□ -0.2
HLA-DQB1-202ENST00000399079 PCDHGA8Q9Y5G5 932 aa13.8□□□□□ -0.2
HLA-DQB1-202ENST00000399079 LILRA5A6NI73 299 aa13.79□□□□□ -0.2
HLA-DQB1-202ENST00000399079 A8MU76 341 aa13.79□□□□□ -0.2
HLA-DQB1-202ENST00000399079 GOLGA8KD6RF30 607 aa13.79□□□□□ -0.2
HLA-DQB1-202ENST00000399079 GOLGA8TH3BQL2 631 aa13.79□□□□□ -0.2
HLA-DQB1-202ENST00000399079 TMX2-CTNND1H3BSU7 103 aa13.79□□□□□ -0.2
HLA-DQB1-202ENST00000399079 DXOO77932 396 aaKnown RBP13.79□□□□□ -0.2
HLA-DQB1-202ENST00000399079 UBXN7O94888 489 aa13.79□□□□□ -0.2
HLA-DQB1-202ENST00000399079 TYRP1P17643 537 aa13.79□□□□□ -0.2
HLA-DQB1-202ENST00000399079 ARNTP27540 789 aa13.79□□□□□ -0.2
HLA-DQB1-202ENST00000399079 PDHA2P29803 388 aa13.79□□□□□ -0.2
HLA-DQB1-202ENST00000399079 PTGIRP43119 386 aa13.79□□□□□ -0.2
HLA-DQB1-202ENST00000399079 EPHA4P54764 986 aa13.79□□□□□ -0.2
HLA-DQB1-202ENST00000399079 SARNPP82979 210 aaKnown RBP13.79□□□□□ -0.2
HLA-DQB1-202ENST00000399079 ITIH4Q14624 930 aa13.79□□□□□ -0.2
HLA-DQB1-202ENST00000399079 ZNF658BQ4V348 819 aaPredicted RBP13.79□□□□□ -0.2
HLA-DQB1-202ENST00000399079 NAPRTQ6XQN6 538 aa13.79□□□□□ -0.2
HLA-DQB1-202ENST00000399079 PKD1L2Q7Z442 2459 aa13.79□□□□□ -0.2
HLA-DQB1-202ENST00000399079 LSMEM2Q8N112 164 aa13.79□□□□□ -0.2
HLA-DQB1-202ENST00000399079 NAT8LQ8N9F0 302 aa13.79□□□□□ -0.2
HLA-DQB1-202ENST00000399079 HM13Q8TCT9 377 aa13.79□□□□□ -0.2
HLA-DQB1-202ENST00000399079 FGF11Q92914 225 aa13.79□□□□□ -0.2
HLA-DQB1-202ENST00000399079 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.79□□□□□ -0.2
HLA-DQB1-202ENST00000399079 C12orf66Q96MD2 445 aa13.79□□□□□ -0.2
HLA-DQB1-202ENST00000399079 SERPINB12Q96P63 405 aa13.79□□□□□ -0.2
HLA-DQB1-202ENST00000399079 CCM2Q9BSQ5 444 aa13.79□□□□□ -0.2
HLA-DQB1-202ENST00000399079 COG4Q9H9E3 785 aa13.79□□□□□ -0.2
HLA-DQB1-202ENST00000399079 CATSPERZQ9NTU4 200 aa13.79□□□□□ -0.2
HLA-DQB1-202ENST00000399079 PISDQ9UG56 409 aa13.79□□□□□ -0.2
HLA-DQB1-202ENST00000399079 KLHL3Q9UH77 587 aa13.79□□□□□ -0.2
HLA-DQB1-202ENST00000399079 ACSL5Q9ULC5 683 aa13.79□□□□□ -0.2
HLA-DQB1-202ENST00000399079 SOX13Q9UN79 622 aa13.79□□□□□ -0.2
HLA-DQB1-202ENST00000399079 C17orf113A0A1B0GUU1 675 aa13.78□□□□□ -0.2
HLA-DQB1-202ENST00000399079 KLHL33A6NCF5 533 aa13.78□□□□□ -0.2
HLA-DQB1-202ENST00000399079 CD3EAPO15446 510 aaKnown RBP13.78□□□□□ -0.2
HLA-DQB1-202ENST00000399079 KRT37O76014 449 aa13.78□□□□□ -0.2
HLA-DQB1-202ENST00000399079 AP2A2O94973 939 aa13.78□□□□□ -0.2
HLA-DQB1-202ENST00000399079 VAPBO95292 243 aa13.78□□□□□ -0.2
HLA-DQB1-202ENST00000399079 SLC35G4P0C7Q5 338 aa13.78□□□□□ -0.2
HLA-DQB1-202ENST00000399079 JMJD7P0C870 316 aa13.78□□□□□ -0.2
HLA-DQB1-202ENST00000399079 THRAP10827 490 aa13.78□□□□□ -0.2
HLA-DQB1-202ENST00000399079 RBMS1P29558 406 aaKnown RBP13.78□□□□□ -0.2
HLA-DQB1-202ENST00000399079 ETV5P41161 510 aa13.78□□□□□ -0.2
HLA-DQB1-202ENST00000399079 PREPP48147 710 aa13.78□□□□□ -0.2
HLA-DQB1-202ENST00000399079 EIF3IQ13347 325 aaKnown RBP13.78□□□□□ -0.2
HLA-DQB1-202ENST00000399079 BRD3Q15059 726 aa13.78□□□□□ -0.2
HLA-DQB1-202ENST00000399079 CLPPQ16740 277 aaPredicted RBP13.78□□□□□ -0.2
HLA-DQB1-202ENST00000399079 CASC4Q6P4E1 433 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms