RNA–Protein interactions for RNA: ENST00000399017.6

TTC3-204, Transcript of tetratricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC3, Length 10,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-204ENST00000399017 C5orf22Q49AR2 442 aa4.96□□□□□ -1.61
TTC3-204ENST00000399017 CDKAL1Q5VV42 579 aa4.96□□□□□ -1.61
TTC3-204ENST00000399017 ZNF571Q7Z3V5 609 aaPredicted RBP4.96□□□□□ -1.61
TTC3-204ENST00000399017 ZNF100Q8IYN0 542 aa4.96□□□□□ -1.61
TTC3-204ENST00000399017 POF1BQ8WVV4 589 aa4.96□□□□□ -1.61
TTC3-204ENST00000399017 RAB7BQ96AH8 199 aa4.96□□□□□ -1.61
TTC3-204ENST00000399017 RPL36Q9Y3U8 105 aaKnown RBP4.96□□□□□ -1.61
TTC3-204ENST00000399017 XRN1Q8IZH2 1706 aaKnown RBP4.96□□□□□ -1.61
TTC3-204ENST00000399017 TET1Q8NFU7 2136 aa4.96□□□□□ -1.61
TTC3-204ENST00000399017 TRDMT1O14717 391 aaKnown RBP4.96□□□□□ -1.61
TTC3-204ENST00000399017 CBFA2T3O75081 653 aa4.96□□□□□ -1.61
TTC3-204ENST00000399017 LRIG2O94898 1065 aa4.96□□□□□ -1.61
TTC3-204ENST00000399017 CDK14O94921 469 aa4.96□□□□□ -1.61
TTC3-204ENST00000399017 PLEKP08567 350 aaPredicted RBP4.96□□□□□ -1.61
TTC3-204ENST00000399017 NSG1P42857 185 aa4.96□□□□□ -1.61
TTC3-204ENST00000399017 ARCN1P48444 511 aaKnown RBP4.96□□□□□ -1.61
TTC3-204ENST00000399017 POLD2P49005 469 aa4.96□□□□□ -1.61
TTC3-204ENST00000399017 TOB1P50616 345 aaPredicted RBP4.96□□□□□ -1.61
TTC3-204ENST00000399017 CAP1Q01518 475 aa4.96□□□□□ -1.61
TTC3-204ENST00000399017 ZNF155Q12901 538 aaPredicted RBP4.96□□□□□ -1.61
TTC3-204ENST00000399017 C6orf141Q5SZD1 244 aa4.96□□□□□ -1.61
TTC3-204ENST00000399017 UBXN11Q5T124 520 aa4.96□□□□□ -1.61
TTC3-204ENST00000399017 FUT10Q6P4F1 479 aa4.96□□□□□ -1.61
TTC3-204ENST00000399017 APTXQ7Z2E3 356 aaKnown RBP4.96□□□□□ -1.61
TTC3-204ENST00000399017 DGLUCYQ7Z3D6 616 aa4.96□□□□□ -1.61
TTC3-204ENST00000399017 PIM3Q86V86 326 aa4.96□□□□□ -1.61
TTC3-204ENST00000399017 ZNF565Q8N9K5 539 aa4.96□□□□□ -1.61
TTC3-204ENST00000399017 TSEN15Q8WW01 171 aaKnown RBP4.96□□□□□ -1.61
TTC3-204ENST00000399017 NCSTNQ92542 709 aa4.96□□□□□ -1.61
TTC3-204ENST00000399017 MCRS1Q96EZ8 462 aa4.96□□□□□ -1.61
TTC3-204ENST00000399017 FER1L6-AS2Q96M78 137 aa4.96□□□□□ -1.61
TTC3-204ENST00000399017 TXN2Q99757 166 aa4.96□□□□□ -1.61
TTC3-204ENST00000399017 AARSD1Q9BTE6 412 aaKnown RBP4.96□□□□□ -1.61
TTC3-204ENST00000399017 EPB41L1Q9H4G0 881 aa4.96□□□□□ -1.61
TTC3-204ENST00000399017 TMEM134Q9H6X4 195 aa4.96□□□□□ -1.61
TTC3-204ENST00000399017 GTF2IRD1Q9UHL9 959 aa4.96□□□□□ -1.61
TTC3-204ENST00000399017 USP15Q9Y4E8 981 aaPredicted RBP4.96□□□□□ -1.61
TTC3-204ENST00000399017 PIK3C2BO00750 1634 aa4.96□□□□□ -1.61
TTC3-204ENST00000399017 TARBP1Q13395 1621 aaKnown RBP4.96□□□□□ -1.61
TTC3-204ENST00000399017 ARL5CA6NH57 179 aa4.96□□□□□ -1.62
TTC3-204ENST00000399017 L7N2F9 121 aa4.96□□□□□ -1.62
TTC3-204ENST00000399017 ANKRD28O15084 1053 aa4.96□□□□□ -1.62
TTC3-204ENST00000399017 GYS1P13807 737 aa4.96□□□□□ -1.62
TTC3-204ENST00000399017 ZNF12P17014 697 aa4.96□□□□□ -1.62
TTC3-204ENST00000399017 ZNF81P51508 661 aa4.96□□□□□ -1.62
TTC3-204ENST00000399017 SEC13P55735 322 aa4.96□□□□□ -1.62
TTC3-204ENST00000399017 VAMP2P63027 116 aa4.96□□□□□ -1.62
TTC3-204ENST00000399017 ITPK1Q13572 414 aa4.96□□□□□ -1.62
TTC3-204ENST00000399017 POM121L1PQ3SYA9 428 aa4.96□□□□□ -1.62
TTC3-204ENST00000399017 KIAA2026Q5HYC2 2103 aa4.96□□□□□ -1.62
TTC3-204ENST00000399017 ALG1LQ6GMV1 187 aa4.96□□□□□ -1.62
TTC3-204ENST00000399017 ENPP7Q6UWV6 458 aa4.96□□□□□ -1.62
TTC3-204ENST00000399017 C10orf107Q8IVU9 208 aa4.96□□□□□ -1.62
TTC3-204ENST00000399017 TMEM151BQ8IW70 566 aa4.96□□□□□ -1.62
TTC3-204ENST00000399017 ANKRD27Q96NW4 1050 aa4.96□□□□□ -1.62
TTC3-204ENST00000399017 QKIQ96PU8 341 aaKnown RBP eCLIP4.96□□□□□ -1.626e-6■■■■□ 23.1
TTC3-204ENST00000399017 RAD9AQ99638 391 aa4.96□□□□□ -1.62
TTC3-204ENST00000399017 SLC25A23Q9BV35 468 aa4.96□□□□□ -1.62
TTC3-204ENST00000399017 ACTRT3Q9BYD9 372 aa4.96□□□□□ -1.62
TTC3-204ENST00000399017 HES7Q9BYE0 225 aa4.96□□□□□ -1.62
TTC3-204ENST00000399017 NUAK2Q9H093 628 aa4.96□□□□□ -1.62
TTC3-204ENST00000399017 KCNK4Q9NYG8 393 aa4.96□□□□□ -1.62
TTC3-204ENST00000399017 C2CD2Q9Y426 696 aa4.96□□□□□ -1.62
TTC3-204ENST00000399017 PCDHA2Q9Y5H9 948 aa4.96□□□□□ -1.62
TTC3-204ENST00000399017 FAM155AB1AL88 458 aaPredicted RBP4.96□□□□□ -1.62
TTC3-204ENST00000399017 GZMAP12544 262 aa4.96□□□□□ -1.62
TTC3-204ENST00000399017 CCNB1P14635 433 aa4.96□□□□□ -1.62
TTC3-204ENST00000399017 RPS3P23396 243 aaKnown RBP eCLIP4.96□□□□□ -1.62
TTC3-204ENST00000399017 TIE1P35590 1138 aa4.96□□□□□ -1.62
TTC3-204ENST00000399017 MAGOHP61326 146 aaKnown RBP4.96□□□□□ -1.62
TTC3-204ENST00000399017 VLDLRP98155 873 aa4.96□□□□□ -1.62
TTC3-204ENST00000399017 BEX3Q00994 111 aa4.96□□□□□ -1.62
TTC3-204ENST00000399017 RASA2Q15283 850 aa4.96□□□□□ -1.62
TTC3-204ENST00000399017 SLC1A5Q15758 541 aa4.96□□□□□ -1.62
TTC3-204ENST00000399017 BRAT1Q6PJG6 821 aa4.96□□□□□ -1.62
TTC3-204ENST00000399017 SLC22A15Q8IZD6 547 aa4.96□□□□□ -1.62
TTC3-204ENST00000399017 KAT2AQ92830 837 aa4.96□□□□□ -1.62
TTC3-204ENST00000399017 NELL1Q92832 810 aa4.96□□□□□ -1.62
TTC3-204ENST00000399017 MTMR8Q96EF0 704 aa4.96□□□□□ -1.62
TTC3-204ENST00000399017 ARHGAP39Q9C0H5 1083 aa4.96□□□□□ -1.62
TTC3-204ENST00000399017 SLC39A9Q9NUM3 307 aa4.96□□□□□ -1.62
TTC3-204ENST00000399017 STOML2Q9UJZ1 356 aa4.96□□□□□ -1.62
TTC3-204ENST00000399017 TULP3O75386 442 aa4.96□□□□□ -1.62
TTC3-204ENST00000399017 ALDOBP05062 364 aa4.96□□□□□ -1.62
TTC3-204ENST00000399017 CLCN1P35523 988 aa4.96□□□□□ -1.62
TTC3-204ENST00000399017 EIF2B2P49770 351 aaKnown RBP4.96□□□□□ -1.62
TTC3-204ENST00000399017 CDC42P60953 191 aa4.96□□□□□ -1.62
TTC3-204ENST00000399017 MED22Q15528 200 aa4.96□□□□□ -1.62
TTC3-204ENST00000399017 KHDC1LQ5JSQ8 128 aa4.96□□□□□ -1.62
TTC3-204ENST00000399017 ARHGAP11AQ6P4F7 1023 aa4.96□□□□□ -1.62
TTC3-204ENST00000399017 KCNT2Q6UVM3 1135 aa4.96□□□□□ -1.62
TTC3-204ENST00000399017 FBXO15Q8NCQ5 510 aaPredicted RBP4.96□□□□□ -1.62
TTC3-204ENST00000399017 PPCDCQ96CD2 204 aa4.96□□□□□ -1.62
TTC3-204ENST00000399017 DPH3Q96FX2 82 aa4.96□□□□□ -1.62
TTC3-204ENST00000399017 NTPCRQ9BSD7 190 aaKnown RBP4.96□□□□□ -1.62
TTC3-204ENST00000399017 DENND2DQ9H6A0 471 aaPredicted RBP4.96□□□□□ -1.62
TTC3-204ENST00000399017 CMTM6Q9NX76 183 aa4.96□□□□□ -1.62
TTC3-204ENST00000399017 KCND3Q9UK17 655 aa4.96□□□□□ -1.62
TTC3-204ENST00000399017 F5P12259 2224 aa4.96□□□□□ -1.62
TTC3-204ENST00000399017 NAV1Q8NEY1 1877 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms