RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 PRLHRP49683 370 aa13.67□□□□□ -0.22
SEC13-204ENST00000397099 CTSCP53634 463 aa13.67□□□□□ -0.22
SEC13-204ENST00000397099 CDK16Q00536 496 aa13.67□□□□□ -0.22
SEC13-204ENST00000397099 RHDQ02161 417 aa13.67□□□□□ -0.22
SEC13-204ENST00000397099 CFHR1Q03591 330 aa13.67□□□□□ -0.22
SEC13-204ENST00000397099 RPA4Q13156 261 aa13.67□□□□□ -0.22
SEC13-204ENST00000397099 CLN3Q13286 438 aa13.67□□□□□ -0.22
SEC13-204ENST00000397099 SPARCL1Q14515 664 aa13.67□□□□□ -0.22
SEC13-204ENST00000397099 POU6F1Q14863 301 aa13.67□□□□□ -0.22
SEC13-204ENST00000397099 SEPT7Q16181 437 aaKnown RBP13.67□□□□□ -0.22
SEC13-204ENST00000397099 PPP1R21Q6ZMI0 780 aa13.67□□□□□ -0.22
SEC13-204ENST00000397099 CCDC81Q6ZN84 652 aa13.67□□□□□ -0.22
SEC13-204ENST00000397099 RCBTB1Q8NDN9 531 aa13.67□□□□□ -0.22
SEC13-204ENST00000397099 HM13Q8TCT9 377 aa13.67□□□□□ -0.22
SEC13-204ENST00000397099 C1orf54Q8WWF1 131 aa13.67□□□□□ -0.22
SEC13-204ENST00000397099 USP7Q93009 1102 aa13.67□□□□□ -0.22
SEC13-204ENST00000397099 WBP1Q96G27 269 aa13.67□□□□□ -0.22
SEC13-204ENST00000397099 CDKN2AIPNLQ96HQ2 116 aa13.67□□□□□ -0.22
SEC13-204ENST00000397099 RANBP9Q96S59 729 aa13.67□□□□□ -0.22
SEC13-204ENST00000397099 ETNK1Q9HBU6 452 aa13.67□□□□□ -0.22
SEC13-204ENST00000397099 EIF2B3Q9NR50 452 aaKnown RBP13.67□□□□□ -0.22
SEC13-204ENST00000397099 FBXO8Q9NRD0 319 aa13.67□□□□□ -0.22
SEC13-204ENST00000397099 ZDHHC3Q9NYG2 299 aa13.67□□□□□ -0.22
SEC13-204ENST00000397099 SCHIP1Q9P0W5 487 aaPredicted RBP13.67□□□□□ -0.22
SEC13-204ENST00000397099 JRKLQ9Y4A0 524 aa13.67□□□□□ -0.22
SEC13-204ENST00000397099 COLEC10Q9Y6Z7 277 aa13.67□□□□□ -0.22
SEC13-204ENST00000397099 BAHCC1Q9P281 2608 aa13.66□□□□□ -0.22
SEC13-204ENST00000397099 PRAMEF33A0A0G2JMD5 474 aa13.66□□□□□ -0.22
SEC13-204ENST00000397099 GOLGA6L3A6NEY3 463 aa13.66□□□□□ -0.22
SEC13-204ENST00000397099 ZSCAN12O43309 604 aa13.66□□□□□ -0.22
SEC13-204ENST00000397099 PRAMEF10O60809 474 aa13.66□□□□□ -0.22
SEC13-204ENST00000397099 FGGP02679 453 aa13.66□□□□□ -0.22
SEC13-204ENST00000397099 SLC35G4P0C7Q5 338 aa13.66□□□□□ -0.22
SEC13-204ENST00000397099 FGF3P11487 239 aaPredicted RBP13.66□□□□□ -0.22
SEC13-204ENST00000397099 ITIH1P19827 911 aa13.66□□□□□ -0.22
SEC13-204ENST00000397099 ADRA1DP25100 572 aa13.66□□□□□ -0.22
SEC13-204ENST00000397099 NSG1P42857 185 aa13.66□□□□□ -0.22
SEC13-204ENST00000397099 MAPK9P45984 424 aa13.66□□□□□ -0.22
SEC13-204ENST00000397099 CAPZBP47756 277 aa13.66□□□□□ -0.22
SEC13-204ENST00000397099 ATP1A2P50993 1020 aa13.66□□□□□ -0.22
SEC13-204ENST00000397099 DRG2P55039 364 aaKnown RBP13.66□□□□□ -0.22
SEC13-204ENST00000397099 MC2RQ01718 297 aa13.66□□□□□ -0.22
SEC13-204ENST00000397099 PLOD1Q02809 727 aaPredicted RBP13.66□□□□□ -0.22
SEC13-204ENST00000397099 OLIG2Q13516 323 aa13.66□□□□□ -0.22
SEC13-204ENST00000397099 ITIH4Q14624 930 aa13.66□□□□□ -0.22
SEC13-204ENST00000397099 PTPRCAPQ14761 206 aa13.66□□□□□ -0.22
SEC13-204ENST00000397099 ZRANB3Q5FWF4 1079 aa13.66□□□□□ -0.22
SEC13-204ENST00000397099 CEACAM20Q6UY09 585 aa13.66□□□□□ -0.22
SEC13-204ENST00000397099 PACS1Q6VY07 963 aa13.66□□□□□ -0.22
SEC13-204ENST00000397099 CERS6Q6ZMG9 384 aa13.66□□□□□ -0.22
SEC13-204ENST00000397099 GSTA5Q7RTV2 222 aa13.66□□□□□ -0.22
SEC13-204ENST00000397099 ZNF761Q86XN6 746 aaPredicted RBP13.66□□□□□ -0.22
SEC13-204ENST00000397099 CARFQ8N187 725 aa13.66□□□□□ -0.22
SEC13-204ENST00000397099 ZSCAN1Q8NBB4 408 aa13.66□□□□□ -0.22
SEC13-204ENST00000397099 SGF29Q96ES7 293 aa13.66□□□□□ -0.22
SEC13-204ENST00000397099 SGSM3Q96HU1 749 aa13.66□□□□□ -0.22
SEC13-204ENST00000397099 DNAJC1Q96KC8 554 aaKnown RBP13.66□□□□□ -0.22
SEC13-204ENST00000397099 C9orf72Q96LT7 481 aa13.66□□□□□ -0.22
SEC13-204ENST00000397099 CD180Q99467 661 aa13.66□□□□□ -0.22
SEC13-204ENST00000397099 TLR10Q9BXR5 811 aa13.66□□□□□ -0.22
SEC13-204ENST00000397099 GRPEL1Q9HAV7 217 aa13.66□□□□□ -0.22
SEC13-204ENST00000397099 RAB6BQ9NRW1 208 aa13.66□□□□□ -0.22
SEC13-204ENST00000397099 SLC39A1Q9NY26 324 aa13.66□□□□□ -0.22
SEC13-204ENST00000397099 KCTD3Q9Y597 815 aa13.66□□□□□ -0.22
SEC13-204ENST00000397099 PIKFYVEQ9Y2I7 2098 aa13.65□□□□□ -0.22
SEC13-204ENST00000397099 OR52A4PA6NMU1 304 aa13.65□□□□□ -0.22
SEC13-204ENST00000397099 C9orf172C9J069 976 aa13.65□□□□□ -0.22
SEC13-204ENST00000397099 K7ENP7 123 aa13.65□□□□□ -0.22
SEC13-204ENST00000397099 MATN2O00339 956 aa13.65□□□□□ -0.22
SEC13-204ENST00000397099 APRTP07741 180 aa13.65□□□□□ -0.22
SEC13-204ENST00000397099 MTHFD1P11586 935 aaKnown RBP13.65□□□□□ -0.22
SEC13-204ENST00000397099 CD151P48509 253 aa13.65□□□□□ -0.22
SEC13-204ENST00000397099 SARNPP82979 210 aaKnown RBP13.65□□□□□ -0.22
SEC13-204ENST00000397099 TMPRSS15P98073 1019 aa13.65□□□□□ -0.22
SEC13-204ENST00000397099 SEPT6Q14141 434 aa13.65□□□□□ -0.22
SEC13-204ENST00000397099 GPR18Q14330 331 aa13.65□□□□□ -0.22
SEC13-204ENST00000397099 NFE2L1Q14494 772 aa13.65□□□□□ -0.22
SEC13-204ENST00000397099 CLCA4Q14CN2 919 aa13.65□□□□□ -0.22
SEC13-204ENST00000397099 RPE65Q16518 533 aa13.65□□□□□ -0.22
SEC13-204ENST00000397099 INO80CQ6PI98 192 aaPredicted RBP13.65□□□□□ -0.22
SEC13-204ENST00000397099 XKR5Q6UX68 686 aa13.65□□□□□ -0.22
SEC13-204ENST00000397099 TAS2R42Q7RTR8 314 aa13.65□□□□□ -0.22
SEC13-204ENST00000397099 SERPINA9Q86WD7 417 aa13.65□□□□□ -0.22
SEC13-204ENST00000397099 FAM129CQ86XR2 697 aa13.65□□□□□ -0.22
SEC13-204ENST00000397099 DTX1Q86Y01 620 aa13.65□□□□□ -0.22
SEC13-204ENST00000397099 PBKQ96KB5 322 aa13.65□□□□□ -0.22
SEC13-204ENST00000397099 TBC1D10AQ9BXI6 508 aa13.65□□□□□ -0.22
SEC13-204ENST00000397099 TRIT1Q9H3H1 467 aaKnown RBP13.65□□□□□ -0.22
SEC13-204ENST00000397099 EFCAB7A8K855 629 aa13.64□□□□□ -0.23
SEC13-204ENST00000397099 IFRD1O00458 451 aaPredicted RBP13.64□□□□□ -0.23
SEC13-204ENST00000397099 CAPN5O15484 640 aaPredicted RBP13.64□□□□□ -0.23
SEC13-204ENST00000397099 GPR39O43194 453 aa13.64□□□□□ -0.23
SEC13-204ENST00000397099 CEP104O60308 925 aa13.64□□□□□ -0.23
SEC13-204ENST00000397099 C1QL1O75973 258 aa13.64□□□□□ -0.23
SEC13-204ENST00000397099 FTH1P02794 183 aa13.64□□□□□ -0.23
SEC13-204ENST00000397099 CCL4P13236 92 aa13.64□□□□□ -0.23
SEC13-204ENST00000397099 TPH1P17752 444 aa13.64□□□□□ -0.23
SEC13-204ENST00000397099 ETV5P41161 510 aa13.64□□□□□ -0.23
SEC13-204ENST00000397099 SNX1Q13596 522 aa13.64□□□□□ -0.23
SEC13-204ENST00000397099 IL11RAQ14626 422 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms