RNA–Protein interactions for RNA: ENST00000397053.6

UPF2-203, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UPF2, Length 5,369 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-203ENST00000397053 FADS2P1A8MWK0 482 aa7.11□□□□□ -1.27
UPF2-203ENST00000397053 H0YJX3 145 aa7.11□□□□□ -1.27
UPF2-203ENST00000397053 PGLSO95336 258 aa7.11□□□□□ -1.27
UPF2-203ENST00000397053 RENP00797 406 aa7.11□□□□□ -1.27
UPF2-203ENST00000397053 ANXA2P07355 339 aaKnown RBP7.11□□□□□ -1.27
UPF2-203ENST00000397053 ZNF806P0C7X5 589 aa7.11□□□□□ -1.27
UPF2-203ENST00000397053 COX4I1P13073 169 aa7.11□□□□□ -1.27
UPF2-203ENST00000397053 PGAM2P15259 253 aa7.11□□□□□ -1.27
UPF2-203ENST00000397053 PRKCHP24723 683 aa7.11□□□□□ -1.27
UPF2-203ENST00000397053 EIF2S3P41091 472 aaKnown RBP7.11□□□□□ -1.27
UPF2-203ENST00000397053 CYP4F8P98187 520 aa7.11□□□□□ -1.27
UPF2-203ENST00000397053 SLC25A3Q00325 362 aa7.11□□□□□ -1.27
UPF2-203ENST00000397053 BST1Q10588 318 aa7.11□□□□□ -1.27
UPF2-203ENST00000397053 ECH1Q13011 328 aa7.11□□□□□ -1.27
UPF2-203ENST00000397053 PLEKHG4Q58EX7 1191 aa7.11□□□□□ -1.27
UPF2-203ENST00000397053 BICRALQ6AI39 1079 aa7.11□□□□□ -1.27
UPF2-203ENST00000397053 PRSS55Q6UWB4 352 aaPredicted RBP7.11□□□□□ -1.27
UPF2-203ENST00000397053 SYVN1Q86TM6 617 aa7.11□□□□□ -1.27
UPF2-203ENST00000397053 PNLDC1Q8NA58 520 aaKnown RBP7.11□□□□□ -1.27
UPF2-203ENST00000397053 PSMA8Q8TAA3 256 aa7.11□□□□□ -1.27
UPF2-203ENST00000397053 PPM1MQ96MI6 270 aa7.11□□□□□ -1.27
UPF2-203ENST00000397053 ZNF717Q9BY31 904 aaPredicted RBP7.11□□□□□ -1.27
UPF2-203ENST00000397053 KCNF1Q9H3M0 494 aa7.11□□□□□ -1.27
UPF2-203ENST00000397053 PCDH18Q9HCL0 1135 aa7.11□□□□□ -1.27
UPF2-203ENST00000397053 CD248Q9HCU0 757 aa7.11□□□□□ -1.27
UPF2-203ENST00000397053 MKKSQ9NPJ1 570 aaPredicted RBP7.11□□□□□ -1.27
UPF2-203ENST00000397053 SAR1AQ9NR31 198 aa7.11□□□□□ -1.27
UPF2-203ENST00000397053 SNX15Q9NRS6 342 aa7.11□□□□□ -1.27
UPF2-203ENST00000397053 FKBP14Q9NWM8 211 aa7.11□□□□□ -1.27
UPF2-203ENST00000397053 CFL2Q9Y281 166 aa7.11□□□□□ -1.27
UPF2-203ENST00000397053 FAM240BA0A1B0GVZ2 78 aa7.11□□□□□ -1.27
UPF2-203ENST00000397053 KLRG2A4D1S0 409 aaPredicted RBP7.11□□□□□ -1.27
UPF2-203ENST00000397053 E9PAM4 449 aa7.11□□□□□ -1.27
UPF2-203ENST00000397053 TP73O15350 636 aa7.11□□□□□ -1.27
UPF2-203ENST00000397053 MT-CYBP00156 380 aaPredicted RBP7.11□□□□□ -1.27
UPF2-203ENST00000397053 TNFP01375 233 aa7.11□□□□□ -1.27
UPF2-203ENST00000397053 PRH1P02810 166 aa7.11□□□□□ -1.27
UPF2-203ENST00000397053 CCNOP22674 350 aa7.11□□□□□ -1.27
UPF2-203ENST00000397053 ECHS1P30084 290 aa7.11□□□□□ -1.27
UPF2-203ENST00000397053 HSPA7P48741 367 aa7.11□□□□□ -1.27
UPF2-203ENST00000397053 RPS6KA3P51812 740 aa7.11□□□□□ -1.27
UPF2-203ENST00000397053 CD47Q08722 323 aa7.11□□□□□ -1.27
UPF2-203ENST00000397053 CBX3Q13185 183 aa7.11□□□□□ -1.27
UPF2-203ENST00000397053 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.11□□□□□ -1.27
UPF2-203ENST00000397053 SMARCD3Q6STE5 483 aa7.11□□□□□ -1.27
UPF2-203ENST00000397053 PLET1Q6UQ28 207 aa7.11□□□□□ -1.27
UPF2-203ENST00000397053 MMAAQ8IVH4 418 aaKnown RBP7.11□□□□□ -1.27
UPF2-203ENST00000397053 MSL3Q8N5Y2 521 aaKnown RBP7.11□□□□□ -1.27
UPF2-203ENST00000397053 FAM110BQ8TC76 370 aa7.11□□□□□ -1.27
UPF2-203ENST00000397053 DENND1AQ8TEH3 1009 aa7.11□□□□□ -1.27
UPF2-203ENST00000397053 TBATAQ96M53 351 aa7.11□□□□□ -1.27
UPF2-203ENST00000397053 B3GNT5Q9BYG0 378 aa7.11□□□□□ -1.27
UPF2-203ENST00000397053 MAGEL2Q9UJ55 1249 aa7.11□□□□□ -1.27
UPF2-203ENST00000397053 NEXMIFQ5QGS0 1516 aa7.11□□□□□ -1.27
UPF2-203ENST00000397053 SMCO3A2RU48 225 aa7.11□□□□□ -1.27
UPF2-203ENST00000397053 PDCD5O14737 125 aa7.11□□□□□ -1.27
UPF2-203ENST00000397053 LAMTOR5O43504 91 aa7.11□□□□□ -1.27
UPF2-203ENST00000397053 LIASO43766 372 aa7.11□□□□□ -1.27
UPF2-203ENST00000397053 CSTBP04080 98 aaKnown RBP7.11□□□□□ -1.27
UPF2-203ENST00000397053 ANPEPP15144 967 aa7.11□□□□□ -1.27
UPF2-203ENST00000397053 IL12AP29459 219 aa7.11□□□□□ -1.27
UPF2-203ENST00000397053 HSF2Q03933 536 aa7.11□□□□□ -1.27
UPF2-203ENST00000397053 LRP8Q14114 963 aa7.11□□□□□ -1.27
UPF2-203ENST00000397053 PRKD1Q15139 912 aaPredicted RBP7.11□□□□□ -1.27
UPF2-203ENST00000397053 ABCA11PQ4W5N1 156 aa7.11□□□□□ -1.27
UPF2-203ENST00000397053 KLHL26Q53HC5 615 aa7.11□□□□□ -1.27
UPF2-203ENST00000397053 UBAP2Q5T6F2 1119 aaKnown RBP7.11□□□□□ -1.27
UPF2-203ENST00000397053 CDKAL1Q5VV42 579 aa7.11□□□□□ -1.27
UPF2-203ENST00000397053 ARCQ7LC44 396 aa7.11□□□□□ -1.27
UPF2-203ENST00000397053 CAND1Q86VP6 1230 aaKnown RBP7.11□□□□□ -1.27
UPF2-203ENST00000397053 ZNF280BQ86YH2 543 aa7.11□□□□□ -1.27
UPF2-203ENST00000397053 TDRPQ86YL5 185 aa7.11□□□□□ -1.27
UPF2-203ENST00000397053 TTLQ8NG68 377 aa7.11□□□□□ -1.27
UPF2-203ENST00000397053 IL31RAQ8NI17 732 aa7.11□□□□□ -1.27
UPF2-203ENST00000397053 NCSTNQ92542 709 aa7.11□□□□□ -1.27
UPF2-203ENST00000397053 MPP4Q96JB8 637 aa7.11□□□□□ -1.27
UPF2-203ENST00000397053 CXorf56Q9H5V9 222 aa7.11□□□□□ -1.27
UPF2-203ENST00000397053 BLOC1S4Q9NUP1 217 aa7.11□□□□□ -1.27
UPF2-203ENST00000397053 SERTAD3Q9UJW9 196 aa7.11□□□□□ -1.27
UPF2-203ENST00000397053 WASF3Q9UPY6 502 aa7.11□□□□□ -1.27
UPF2-203ENST00000397053 HPSEQ9Y251 543 aa7.11□□□□□ -1.27
UPF2-203ENST00000397053 SPEF1Q9Y4P9 236 aa7.11□□□□□ -1.27
UPF2-203ENST00000397053 ZFP37Q9Y6Q3 630 aaPredicted RBP7.11□□□□□ -1.27
UPF2-203ENST00000397053 PRDM15P57071 1507 aaPredicted RBP7.11□□□□□ -1.27
UPF2-203ENST00000397053 DNAJC13O75165 2243 aa7.11□□□□□ -1.27
UPF2-203ENST00000397053 FAM237BA0A1B0GVD1 139 aa7.1□□□□□ -1.27
UPF2-203ENST00000397053 DYTNA2CJ06 578 aa7.1□□□□□ -1.27
UPF2-203ENST00000397053 FAM172BPA6NC97 362 aa7.1□□□□□ -1.27
UPF2-203ENST00000397053 MUSKO15146 869 aa7.1□□□□□ -1.27
UPF2-203ENST00000397053 LDB2O43679 373 aa7.1□□□□□ -1.27
UPF2-203ENST00000397053 EOMESO95936 686 aa7.1□□□□□ -1.27
UPF2-203ENST00000397053 COL6A1P12109 1028 aa7.1□□□□□ -1.27
UPF2-203ENST00000397053 HOXB2P14652 356 aa7.1□□□□□ -1.27
UPF2-203ENST00000397053 UGT1A1P22309 533 aa7.1□□□□□ -1.27
UPF2-203ENST00000397053 ICAM3P32942 547 aa7.1□□□□□ -1.27
UPF2-203ENST00000397053 RPL7AP62424 266 aaKnown RBP7.1□□□□□ -1.27
UPF2-203ENST00000397053 TXNL4AP83876 142 aaKnown RBP7.1□□□□□ -1.27
UPF2-203ENST00000397053 PLP2Q04941 152 aa7.1□□□□□ -1.27
UPF2-203ENST00000397053 HYAL2Q12891 473 aa7.1□□□□□ -1.27
UPF2-203ENST00000397053 LCN1P1Q5VSP4 162 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms