RNA–Protein interactions for RNA: ENST00000396682.6

RPA3-202, Transcript of replication protein A3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RPA3, Length 847 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-202ENST00000396682 METRNLQ641Q3 311 aa12.97□□□□□ -0.33
RPA3-202ENST00000396682 CYB5D1Q6P9G0 228 aa12.97□□□□□ -0.33
RPA3-202ENST00000396682 TMEM220Q6QAJ8 160 aa12.97□□□□□ -0.33
RPA3-202ENST00000396682 ZNF517Q6ZMY9 492 aaPredicted RBP12.97□□□□□ -0.33
RPA3-202ENST00000396682 ATCAYQ86WG3 371 aa12.97□□□□□ -0.33
RPA3-202ENST00000396682 D2HGDHQ8N465 521 aa12.97□□□□□ -0.33
RPA3-202ENST00000396682 BEND7Q8N7W2 519 aaPredicted RBP12.97□□□□□ -0.33
RPA3-202ENST00000396682 SLC38A9Q8NBW4 561 aa12.97□□□□□ -0.33
RPA3-202ENST00000396682 NAT14Q8WUY8 206 aa12.97□□□□□ -0.33
RPA3-202ENST00000396682 TFB1MQ8WVM0 346 aaKnown RBP12.97□□□□□ -0.33
RPA3-202ENST00000396682 ZNF514Q96K75 400 aaPredicted RBP12.97□□□□□ -0.33
RPA3-202ENST00000396682 CHP1Q99653 195 aa12.97□□□□□ -0.33
RPA3-202ENST00000396682 GPR87Q9BY21 358 aa12.97□□□□□ -0.33
RPA3-202ENST00000396682 IMP3Q9NV31 184 aaKnown RBP12.97□□□□□ -0.33
RPA3-202ENST00000396682 SMOXQ9NWM0 555 aa12.97□□□□□ -0.33
RPA3-202ENST00000396682 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.97□□□□□ -0.334e-8■■■■□ 19.4
RPA3-202ENST00000396682 PRRC2CQ9Y520 2896 aaKnown RBP12.97□□□□□ -0.33
RPA3-202ENST00000396682 TLCD2A6NGC4 264 aa12.96□□□□□ -0.33
RPA3-202ENST00000396682 GOLGA6L19H0YKK7 550 aa12.96□□□□□ -0.33
RPA3-202ENST00000396682 AKR1B10O60218 316 aa12.96□□□□□ -0.33
RPA3-202ENST00000396682 CST8O60676 142 aa12.96□□□□□ -0.33
RPA3-202ENST00000396682 TNNT1P13805 278 aa12.96□□□□□ -0.33
RPA3-202ENST00000396682 PBLDP30039 288 aaPredicted RBP12.96□□□□□ -0.33
RPA3-202ENST00000396682 NR2C2P49116 596 aa12.96□□□□□ -0.33
RPA3-202ENST00000396682 HSD11B2P80365 405 aa12.96□□□□□ -0.33
RPA3-202ENST00000396682 ACY1Q03154 408 aa12.96□□□□□ -0.33
RPA3-202ENST00000396682 GPS2Q13227 327 aa12.96□□□□□ -0.33
RPA3-202ENST00000396682 PLCL1Q15111 1095 aa12.96□□□□□ -0.33
RPA3-202ENST00000396682 SLC1A5Q15758 541 aa12.96□□□□□ -0.33
RPA3-202ENST00000396682 GPR19Q15760 415 aa12.96□□□□□ -0.33
RPA3-202ENST00000396682 PPP2R5EQ16537 467 aa12.96□□□□□ -0.33
RPA3-202ENST00000396682 NADK2Q4G0N4 442 aa12.96□□□□□ -0.33
RPA3-202ENST00000396682 DNTTIP2Q5QJE6 756 aaKnown RBP12.96□□□□□ -0.33
RPA3-202ENST00000396682 ZDHHC20Q5W0Z9 365 aa12.96□□□□□ -0.33
RPA3-202ENST00000396682 KLHL35Q6PF15 583 aa12.96□□□□□ -0.33
RPA3-202ENST00000396682 GLT6D1Q7Z4J2 308 aa12.96□□□□□ -0.33
RPA3-202ENST00000396682 SYVN1Q86TM6 617 aa12.96□□□□□ -0.33
RPA3-202ENST00000396682 BPHLQ86WA6 291 aaPredicted RBP12.96□□□□□ -0.33
RPA3-202ENST00000396682 KMT5CQ86Y97 462 aa12.96□□□□□ -0.33
RPA3-202ENST00000396682 LURAP1LQ8IV03 231 aa12.96□□□□□ -0.33
RPA3-202ENST00000396682 RHOT1Q8IXI2 618 aa12.96□□□□□ -0.33
RPA3-202ENST00000396682 ZNF567Q8N184 647 aa12.96□□□□□ -0.33
RPA3-202ENST00000396682 SPDYE1Q8NFV5 336 aaPredicted RBP12.96□□□□□ -0.33
RPA3-202ENST00000396682 OR8K1Q8NGG5 319 aa12.96□□□□□ -0.33
RPA3-202ENST00000396682 BLOC1S5Q8TDH9 187 aa12.96□□□□□ -0.33
RPA3-202ENST00000396682 ZNF501Q96CX3 271 aaPredicted RBP12.96□□□□□ -0.33
RPA3-202ENST00000396682 PPM1MQ96MI6 270 aa12.96□□□□□ -0.33
RPA3-202ENST00000396682 INSM2Q96T92 566 aaPredicted RBP12.96□□□□□ -0.33
RPA3-202ENST00000396682 CD180Q99467 661 aa12.96□□□□□ -0.33
RPA3-202ENST00000396682 ZCCHC2Q9C0B9 1178 aaKnown RBP12.96□□□□□ -0.33
RPA3-202ENST00000396682 WWP1Q9H0M0 922 aa12.96□□□□□ -0.33
RPA3-202ENST00000396682 DEF6Q9H4E7 631 aa12.96□□□□□ -0.33
RPA3-202ENST00000396682 MLXIPLQ9NP71 852 aa12.96□□□□□ -0.33
RPA3-202ENST00000396682 HRASLS2Q9NWW9 162 aa12.96□□□□□ -0.33
RPA3-202ENST00000396682 DDX56Q9NY93 547 aaKnown RBP12.96□□□□□ -0.33
RPA3-202ENST00000396682 DNMT3AQ9Y6K1 912 aaPredicted RBP12.96□□□□□ -0.33
RPA3-202ENST00000396682 SGTAO43765 313 aa12.95□□□□□ -0.34
RPA3-202ENST00000396682 SCRG1O75711 98 aa12.95□□□□□ -0.34
RPA3-202ENST00000396682 COMTP21964 271 aa12.95□□□□□ -0.34
RPA3-202ENST00000396682 GNLYP22749 145 aa12.95□□□□□ -0.34
RPA3-202ENST00000396682 ARCN1P48444 511 aaKnown RBP12.95□□□□□ -0.34
RPA3-202ENST00000396682 TUBB4BP68371 445 aa12.95□□□□□ -0.34
RPA3-202ENST00000396682 XRCC4Q13426 336 aa12.95□□□□□ -0.34
RPA3-202ENST00000396682 TUBB2AQ13885 445 aa12.95□□□□□ -0.34
RPA3-202ENST00000396682 FNBP1LQ5T0N5 605 aa12.95□□□□□ -0.34
RPA3-202ENST00000396682 PRAMEF17Q5VTA0 474 aa12.95□□□□□ -0.34
RPA3-202ENST00000396682 KAZNQ674X7 775 aa12.95□□□□□ -0.34
RPA3-202ENST00000396682 HIST2H2BCQ6DN03 193 aa12.95□□□□□ -0.34
RPA3-202ENST00000396682 CAPRIN2Q6IMN6 1127 aaKnown RBP12.95□□□□□ -0.34
RPA3-202ENST00000396682 LCN10Q6JVE6 187 aa12.95□□□□□ -0.34
RPA3-202ENST00000396682 FBXO38Q6PIJ6 1188 aa12.95□□□□□ -0.34
RPA3-202ENST00000396682 DET1Q7L5Y6 550 aa12.95□□□□□ -0.34
RPA3-202ENST00000396682 RHOT2Q8IXI1 618 aa12.95□□□□□ -0.34
RPA3-202ENST00000396682 IPMKQ8NFU5 416 aa12.95□□□□□ -0.34
RPA3-202ENST00000396682 ADAMTS17Q8TE56 1095 aa12.95□□□□□ -0.34
RPA3-202ENST00000396682 THAP4Q8WY91 577 aa12.95□□□□□ -0.34
RPA3-202ENST00000396682 FCRL5Q96RD9 977 aa12.95□□□□□ -0.34
RPA3-202ENST00000396682 GORASP1Q9BQQ3 440 aa12.95□□□□□ -0.34
RPA3-202ENST00000396682 TUBB2BQ9BVA1 445 aa12.95□□□□□ -0.34
RPA3-202ENST00000396682 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.95□□□□□ -0.34
RPA3-202ENST00000396682 HACD3Q9P035 362 aa12.95□□□□□ -0.34
RPA3-202ENST00000396682 KLHL8Q9P2G9 620 aaPredicted RBP12.95□□□□□ -0.34
RPA3-202ENST00000396682 SLC24A2Q9UI40 661 aa12.95□□□□□ -0.34
RPA3-202ENST00000396682 PCSK5Q92824 1860 aa12.94□□□□□ -0.34
RPA3-202ENST00000396682 UBA6A0AVT1 1052 aaPredicted RBP12.94□□□□□ -0.34
RPA3-202ENST00000396682 ARGFXA6NJG6 315 aa12.94□□□□□ -0.34
RPA3-202ENST00000396682 TTLL8A6PVC2 850 aa12.94□□□□□ -0.34
RPA3-202ENST00000396682 DDX3YO15523 660 aaKnown RBP12.94□□□□□ -0.34
RPA3-202ENST00000396682 CPNE3O75131 537 aaKnown RBP12.94□□□□□ -0.34
RPA3-202ENST00000396682 SORBS2O94875 1100 aaKnown RBP12.94□□□□□ -0.34
RPA3-202ENST00000396682 PRAMEF1O95521 474 aa12.94□□□□□ -0.34
RPA3-202ENST00000396682 ZBTB11O95625 1053 aaPredicted RBP12.94□□□□□ -0.34
RPA3-202ENST00000396682 HLA-DPA1P20036 260 aa12.94□□□□□ -0.34
RPA3-202ENST00000396682 SLC1A1P43005 524 aa12.94□□□□□ -0.34
RPA3-202ENST00000396682 PTGIRP43119 386 aa12.94□□□□□ -0.34
RPA3-202ENST00000396682 ARL4DP49703 201 aa12.94□□□□□ -0.34
RPA3-202ENST00000396682 KPNA2P52292 529 aaKnown RBP12.94□□□□□ -0.34
RPA3-202ENST00000396682 RPS15P62841 145 aaKnown RBP12.94□□□□□ -0.34
RPA3-202ENST00000396682 ABRQ12979 859 aa12.94□□□□□ -0.34
RPA3-202ENST00000396682 ITGA9Q13797 1035 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms