RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 SF3A3Q12874 501 aaKnown RBP eCLIP12.5□□□□□ -0.41
TRIM39-204ENST00000396548 ARL13AQ5H913 290 aaPredicted RBP12.5□□□□□ -0.41
TRIM39-204ENST00000396548 HORMAD1Q86X24 394 aa12.5□□□□□ -0.41
TRIM39-204ENST00000396548 ZNF781Q8N8C0 355 aa12.5□□□□□ -0.41
TRIM39-204ENST00000396548 OR14C36Q8NHC7 312 aa12.5□□□□□ -0.41
TRIM39-204ENST00000396548 PIWIL2Q8TC59 973 aaKnown RBP12.5□□□□□ -0.41
TRIM39-204ENST00000396548 THOC1Q96FV9 657 aaKnown RBP12.5□□□□□ -0.41
TRIM39-204ENST00000396548 CCM2Q9BSQ5 444 aa12.5□□□□□ -0.41
TRIM39-204ENST00000396548 RDH14Q9HBH5 336 aa12.5□□□□□ -0.41
TRIM39-204ENST00000396548 PNPOQ9NVS9 261 aa12.5□□□□□ -0.41
TRIM39-204ENST00000396548 A0A1W2PQU0 124 aa12.49□□□□□ -0.41
TRIM39-204ENST00000396548 OR2AG2A6NM03 316 aa12.49□□□□□ -0.41
TRIM39-204ENST00000396548 STX16-NPEPL1H3BU86 382 aa12.49□□□□□ -0.41
TRIM39-204ENST00000396548 UBFD1O14562 309 aaKnown RBP12.49□□□□□ -0.41
TRIM39-204ENST00000396548 STX16O14662 325 aa12.49□□□□□ -0.41
TRIM39-204ENST00000396548 VEGFDO43915 354 aa12.49□□□□□ -0.41
TRIM39-204ENST00000396548 FTH1P02794 183 aa12.49□□□□□ -0.41
TRIM39-204ENST00000396548 ZNF8P17098 575 aaPredicted RBP12.49□□□□□ -0.41
TRIM39-204ENST00000396548 CDK3Q00526 305 aa12.49□□□□□ -0.41
TRIM39-204ENST00000396548 ASPHQ12797 758 aa12.49□□□□□ -0.41
TRIM39-204ENST00000396548 TGFBIQ15582 683 aa12.49□□□□□ -0.41
TRIM39-204ENST00000396548 CRLF3Q8IUI8 442 aa12.49□□□□□ -0.41
TRIM39-204ENST00000396548 PDPRQ8NCN5 879 aa12.49□□□□□ -0.41
TRIM39-204ENST00000396548 MAFAQ8NHW3 353 aaPredicted RBP12.49□□□□□ -0.41
TRIM39-204ENST00000396548 PPP1R14CQ8TAE6 165 aa12.49□□□□□ -0.41
TRIM39-204ENST00000396548 PHF21BQ96EK2 531 aa12.49□□□□□ -0.41
TRIM39-204ENST00000396548 SLC17A9Q9BYT1 436 aa12.49□□□□□ -0.41
TRIM39-204ENST00000396548 CYP4F12Q9HCS2 524 aa12.49□□□□□ -0.41
TRIM39-204ENST00000396548 TNFRSF12AQ9NP84 129 aa12.49□□□□□ -0.41
TRIM39-204ENST00000396548 LTB4R2Q9NPC1 389 aa12.49□□□□□ -0.41
TRIM39-204ENST00000396548 TMCO1Q9UM00 188 aa12.49□□□□□ -0.41
TRIM39-204ENST00000396548 GPR34Q9UPC5 381 aa12.49□□□□□ -0.41
TRIM39-204ENST00000396548 DNAJC16Q9Y2G8 782 aa12.49□□□□□ -0.41
TRIM39-204ENST00000396548 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.49□□□□□ -0.41
TRIM39-204ENST00000396548 SYCE1LA8MT33 242 aa12.49□□□□□ -0.41
TRIM39-204ENST00000396548 GFYI3L273 518 aa12.49□□□□□ -0.41
TRIM39-204ENST00000396548 KPNA5O15131 536 aa12.49□□□□□ -0.41
TRIM39-204ENST00000396548 SMIM24O75264 130 aa12.49□□□□□ -0.41
TRIM39-204ENST00000396548 SNUPNO95149 360 aaKnown RBP12.49□□□□□ -0.41
TRIM39-204ENST00000396548 MATN4O95460 622 aa12.49□□□□□ -0.41
TRIM39-204ENST00000396548 ENO3P13929 434 aaPredicted RBP12.49□□□□□ -0.41
TRIM39-204ENST00000396548 RGS4P49798 205 aa12.49□□□□□ -0.41
TRIM39-204ENST00000396548 TTLL9Q3SXZ7 439 aa12.49□□□□□ -0.41
TRIM39-204ENST00000396548 TTC31Q49AM3 519 aaPredicted RBP12.49□□□□□ -0.41
TRIM39-204ENST00000396548 TRIM69Q86WT6 500 aa12.49□□□□□ -0.41
TRIM39-204ENST00000396548 SREK1Q8WXA9 508 aaKnown RBP12.49□□□□□ -0.41
TRIM39-204ENST00000396548 ASB11Q8WXH4 323 aa12.49□□□□□ -0.41
TRIM39-204ENST00000396548 FAM126AQ9BYI3 521 aaPredicted RBP12.49□□□□□ -0.41
TRIM39-204ENST00000396548 TRIM55Q9BYV6 548 aa12.49□□□□□ -0.41
TRIM39-204ENST00000396548 OSBPL6Q9BZF3 934 aa12.49□□□□□ -0.41
TRIM39-204ENST00000396548 RAP2CQ9Y3L5 183 aa12.49□□□□□ -0.41
TRIM39-204ENST00000396548 LRRC14BA6NHZ5 514 aa12.49□□□□□ -0.41
TRIM39-204ENST00000396548 PCCBP05166 539 aa12.49□□□□□ -0.41
TRIM39-204ENST00000396548 RPS17P08708 135 aaKnown RBP12.49□□□□□ -0.41
TRIM39-204ENST00000396548 ALDH18A1P54886 795 aaKnown RBP12.49□□□□□ -0.41
TRIM39-204ENST00000396548 TUBB3Q13509 450 aa12.49□□□□□ -0.41
TRIM39-204ENST00000396548 SETDB1Q15047 1291 aa12.49□□□□□ -0.41
TRIM39-204ENST00000396548 TMEM220Q6QAJ8 160 aa12.49□□□□□ -0.41
TRIM39-204ENST00000396548 RPS27LQ71UM5 84 aaKnown RBP12.49□□□□□ -0.41
TRIM39-204ENST00000396548 HEATR4Q86WZ0 1026 aa12.49□□□□□ -0.41
TRIM39-204ENST00000396548 GPSM1Q86YR5 675 aa12.49□□□□□ -0.41
TRIM39-204ENST00000396548 MYO1HQ8N1T3 1032 aa12.49□□□□□ -0.41
TRIM39-204ENST00000396548 PTGR2Q8N8N7 351 aaPredicted RBP12.49□□□□□ -0.41
TRIM39-204ENST00000396548 ZNF483Q8TF39 744 aaPredicted RBP12.49□□□□□ -0.41
TRIM39-204ENST00000396548 OR2AG1Q9H205 316 aa12.49□□□□□ -0.41
TRIM39-204ENST00000396548 LMAN1LQ9HAT1 526 aa12.49□□□□□ -0.41
TRIM39-204ENST00000396548 KCNK4Q9NYG8 393 aa12.49□□□□□ -0.41
TRIM39-204ENST00000396548 NUDT4Q9NZJ9 180 aa12.49□□□□□ -0.41
TRIM39-204ENST00000396548 ZDHHC2Q9UIJ5 367 aa12.49□□□□□ -0.41
TRIM39-204ENST00000396548 ASB1Q9Y576 335 aa12.49□□□□□ -0.41
TRIM39-204ENST00000396548 ATG13O75143 517 aa12.48□□□□□ -0.41
TRIM39-204ENST00000396548 PAK4O96013 591 aaPredicted RBP12.48□□□□□ -0.41
TRIM39-204ENST00000396548 IGFALSP35858 605 aa12.48□□□□□ -0.41
TRIM39-204ENST00000396548 INPP5AQ14642 412 aa12.48□□□□□ -0.41
TRIM39-204ENST00000396548 PHKG1Q16816 387 aa12.48□□□□□ -0.41
TRIM39-204ENST00000396548 PFKFB4Q16877 469 aa12.48□□□□□ -0.41
TRIM39-204ENST00000396548 ADAMTSL2Q86TH1 951 aa12.48□□□□□ -0.41
TRIM39-204ENST00000396548 SIKE1Q9BRV8 207 aa12.48□□□□□ -0.41
TRIM39-204ENST00000396548 CHRDQ9H2X0 955 aa12.48□□□□□ -0.41
TRIM39-204ENST00000396548 PTBP2Q9UKA9 531 aaKnown RBP12.48□□□□□ -0.41
TRIM39-204ENST00000396548 KANSL1LA0AUZ9 987 aa12.48□□□□□ -0.41
TRIM39-204ENST00000396548 TAPBPO15533 448 aa12.48□□□□□ -0.41
TRIM39-204ENST00000396548 SIX3O95343 332 aaPredicted RBP12.48□□□□□ -0.41
TRIM39-204ENST00000396548 TROVE2P10155 538 aaKnown RBP eCLIP12.48□□□□□ -0.41
TRIM39-204ENST00000396548 MPSTP25325 297 aa12.48□□□□□ -0.41
TRIM39-204ENST00000396548 ACSL1P33121 698 aa12.48□□□□□ -0.41
TRIM39-204ENST00000396548 DGKEP52429 567 aa12.48□□□□□ -0.41
TRIM39-204ENST00000396548 LILRA3Q8N6C8 439 aaPredicted RBP12.48□□□□□ -0.41
TRIM39-204ENST00000396548 CCT6BQ92526 530 aa12.48□□□□□ -0.41
TRIM39-204ENST00000396548 ST14Q9Y5Y6 855 aa12.48□□□□□ -0.41
TRIM39-204ENST00000396548 LRP4O75096 1905 aa12.47□□□□□ -0.41
TRIM39-204ENST00000396548 C17orf113A0A1B0GUU1 675 aa12.47□□□□□ -0.41
TRIM39-204ENST00000396548 GRID2O43424 1007 aa12.47□□□□□ -0.41
TRIM39-204ENST00000396548 CDK14O94921 469 aa12.47□□□□□ -0.41
TRIM39-204ENST00000396548 FUCA1P04066 466 aa12.47□□□□□ -0.41
TRIM39-204ENST00000396548 GSTM1P09488 218 aa12.47□□□□□ -0.41
TRIM39-204ENST00000396548 GSTM4Q03013 218 aa12.47□□□□□ -0.41
TRIM39-204ENST00000396548 DMTNQ08495 405 aa12.47□□□□□ -0.41
TRIM39-204ENST00000396548 LRRC32Q14392 662 aa12.47□□□□□ -0.41
TRIM39-204ENST00000396548 ZXDCQ2QGD7 858 aaPredicted RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms