RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 JMJD6Q6NYC1 403 aaPredicted RBP17.1■□□□□ 0.33
EXOSC3-202ENST00000396521 FAM199XQ6PEV8 388 aaPredicted RBP17.1■□□□□ 0.33
EXOSC3-202ENST00000396521 DDHD1Q8NEL9 900 aa17.1■□□□□ 0.33
EXOSC3-202ENST00000396521 RAPGEF5Q92565 580 aa17.1■□□□□ 0.33
EXOSC3-202ENST00000396521 PNPLA2Q96AD5 504 aa17.1■□□□□ 0.33
EXOSC3-202ENST00000396521 ZNF501Q96CX3 271 aaPredicted RBP17.1■□□□□ 0.33
EXOSC3-202ENST00000396521 OLFM3Q96PB7 478 aa17.1■□□□□ 0.33
EXOSC3-202ENST00000396521 IP6K3Q96PC2 410 aa17.1■□□□□ 0.33
EXOSC3-202ENST00000396521 DPH2Q9BQC3 489 aaPredicted RBP17.1■□□□□ 0.33
EXOSC3-202ENST00000396521 ANP32EQ9BTT0 268 aa17.1■□□□□ 0.33
EXOSC3-202ENST00000396521 AKIRIN1Q9H9L7 192 aaPredicted RBP17.1■□□□□ 0.33
EXOSC3-202ENST00000396521 GLOD4Q9HC38 313 aa17.1■□□□□ 0.33
EXOSC3-202ENST00000396521 SNX7Q9UNH6 387 aa17.1■□□□□ 0.33
EXOSC3-202ENST00000396521 BTRCQ9Y297 605 aa17.1■□□□□ 0.33
EXOSC3-202ENST00000396521 LUC7L2Q9Y383 392 aaKnown RBP17.1■□□□□ 0.33
EXOSC3-202ENST00000396521 COLEC10Q9Y6Z7 277 aa17.1■□□□□ 0.33
EXOSC3-202ENST00000396521 DOPEY1Q5JWR5 2465 aa17.1■□□□□ 0.33
EXOSC3-202ENST00000396521 SPENQ96T58 3664 aaKnown RBP17.1■□□□□ 0.33
EXOSC3-202ENST00000396521 A0A0A6YYK5 440 aaPredicted RBP17.09■□□□□ 0.33
EXOSC3-202ENST00000396521 LRRD1A4D1F6 860 aa17.09■□□□□ 0.33
EXOSC3-202ENST00000396521 MEN1O00255 615 aa17.09■□□□□ 0.33
EXOSC3-202ENST00000396521 TMEM63AO94886 807 aa17.09■□□□□ 0.33
EXOSC3-202ENST00000396521 MTHFD1P11586 935 aaKnown RBP17.09■□□□□ 0.33
EXOSC3-202ENST00000396521 NDUFS1P28331 727 aa17.09■□□□□ 0.33
EXOSC3-202ENST00000396521 SPAM1P38567 509 aa17.09■□□□□ 0.33
EXOSC3-202ENST00000396521 NR2C2P49116 596 aa17.09■□□□□ 0.33
EXOSC3-202ENST00000396521 TPM4P67936 248 aa17.09■□□□□ 0.33
EXOSC3-202ENST00000396521 ADCY2Q08462 1091 aa17.09■□□□□ 0.33
EXOSC3-202ENST00000396521 IL10RAQ13651 578 aa17.09■□□□□ 0.33
EXOSC3-202ENST00000396521 GLIS1Q8NBF1 620 aa17.09■□□□□ 0.33
EXOSC3-202ENST00000396521 ADAMTS17Q8TE56 1095 aa17.09■□□□□ 0.33
EXOSC3-202ENST00000396521 LRRN4Q8WUT4 740 aa17.09■□□□□ 0.33
EXOSC3-202ENST00000396521 RNF31Q96EP0 1072 aa17.09■□□□□ 0.33
EXOSC3-202ENST00000396521 TEKT5Q96M29 485 aa17.09■□□□□ 0.33
EXOSC3-202ENST00000396521 CHST8Q9H2A9 424 aa17.09■□□□□ 0.33
EXOSC3-202ENST00000396521 SMOXQ9NWM0 555 aa17.09■□□□□ 0.33
EXOSC3-202ENST00000396521 C5AR2Q9P296 337 aa17.09■□□□□ 0.33
EXOSC3-202ENST00000396521 FAM153AQ9UHL3 310 aa17.09■□□□□ 0.33
EXOSC3-202ENST00000396521 PKP3Q9Y446 797 aa17.09■□□□□ 0.33
EXOSC3-202ENST00000396521 HEBP2Q9Y5Z4 205 aa17.09■□□□□ 0.33
EXOSC3-202ENST00000396521 LOC285095A0A1B0GVY8 99 aa17.08■□□□□ 0.32
EXOSC3-202ENST00000396521 SEMA7AO75326 666 aa17.08■□□□□ 0.32
EXOSC3-202ENST00000396521 IGHEP01854 428 aa17.08■□□□□ 0.32
EXOSC3-202ENST00000396521 VAV2P52735 878 aa17.08■□□□□ 0.32
EXOSC3-202ENST00000396521 PPP1CAP62136 330 aa17.08■□□□□ 0.32
EXOSC3-202ENST00000396521 RPS18P62269 152 aaKnown RBP17.08■□□□□ 0.32
EXOSC3-202ENST00000396521 PRKAA1Q13131 559 aa17.08■□□□□ 0.32
EXOSC3-202ENST00000396521 GPS2Q13227 327 aa17.08■□□□□ 0.32
EXOSC3-202ENST00000396521 PPP2R5EQ16537 467 aa17.08■□□□□ 0.32
EXOSC3-202ENST00000396521 ODF2Q5BJF6 829 aa17.08■□□□□ 0.32
EXOSC3-202ENST00000396521 LRRC38Q5VT99 294 aa17.08■□□□□ 0.32
EXOSC3-202ENST00000396521 CPZQ66K79 652 aa17.08■□□□□ 0.32
EXOSC3-202ENST00000396521 TMEM220Q6QAJ8 160 aa17.08■□□□□ 0.32
EXOSC3-202ENST00000396521 RASGEF1AQ8N9B8 481 aa17.08■□□□□ 0.32
EXOSC3-202ENST00000396521 GPR150Q8NGU9 434 aa17.08■□□□□ 0.32
EXOSC3-202ENST00000396521 C17orf62Q9BQA9 187 aa17.08■□□□□ 0.32
EXOSC3-202ENST00000396521 KIR3DX1Q9H7L2 352 aa17.08■□□□□ 0.32
EXOSC3-202ENST00000396521 BPIFA1Q9NP55 256 aa17.08■□□□□ 0.32
EXOSC3-202ENST00000396521 IMP3Q9NV31 184 aaKnown RBP17.08■□□□□ 0.32
EXOSC3-202ENST00000396521 SOHLH2Q9NX45 425 aa17.08■□□□□ 0.32
EXOSC3-202ENST00000396521 GPR83Q9NYM4 423 aa17.08■□□□□ 0.32
EXOSC3-202ENST00000396521 IL17CQ9P0M4 197 aa17.08■□□□□ 0.32
EXOSC3-202ENST00000396521 TCFL5Q9UL49 500 aa17.08■□□□□ 0.32
EXOSC3-202ENST00000396521 SPO11Q9Y5K1 396 aa17.08■□□□□ 0.32
EXOSC3-202ENST00000396521 ITPR2Q14571 2701 aa17.08■□□□□ 0.32
EXOSC3-202ENST00000396521 GLYATL1P3A0A0U1RQE8 302 aa17.07■□□□□ 0.32
EXOSC3-202ENST00000396521 MGAT4DA6NG13 374 aa17.07■□□□□ 0.32
EXOSC3-202ENST00000396521 WIPF3A6NGB9 483 aa17.07■□□□□ 0.32
EXOSC3-202ENST00000396521 AURKAO14965 403 aa17.07■□□□□ 0.32
EXOSC3-202ENST00000396521 PMPCBO75439 489 aa17.07■□□□□ 0.32
EXOSC3-202ENST00000396521 MT-CYBP00156 380 aaPredicted RBP17.07■□□□□ 0.32
EXOSC3-202ENST00000396521 CD63P08962 238 aa17.07■□□□□ 0.32
EXOSC3-202ENST00000396521 HBQ1P09105 142 aa17.07■□□□□ 0.32
EXOSC3-202ENST00000396521 ARHGAP25P42331 645 aa17.07■□□□□ 0.32
EXOSC3-202ENST00000396521 PTGIRP43119 386 aa17.07■□□□□ 0.32
EXOSC3-202ENST00000396521 MAMDC2Q7Z304 686 aaPredicted RBP17.07■□□□□ 0.32
EXOSC3-202ENST00000396521 DSELQ8IZU8 1212 aa17.07■□□□□ 0.32
EXOSC3-202ENST00000396521 SPATA22Q8NHS9 363 aa17.07■□□□□ 0.32
EXOSC3-202ENST00000396521 RUFY1Q96T51 708 aa17.07■□□□□ 0.32
EXOSC3-202ENST00000396521 SMAD5Q99717 465 aaKnown RBP17.07■□□□□ 0.32
EXOSC3-202ENST00000396521 DHRS4Q9BTZ2 278 aa17.07■□□□□ 0.32
EXOSC3-202ENST00000396521 CEP41Q9BYV8 373 aa17.07■□□□□ 0.32
EXOSC3-202ENST00000396521 CASS4Q9NQ75 786 aa17.07■□□□□ 0.32
EXOSC3-202ENST00000396521 C1GALT1Q9NS00 363 aa17.07■□□□□ 0.32
EXOSC3-202ENST00000396521 SLC24A2Q9UI40 661 aa17.07■□□□□ 0.32
EXOSC3-202ENST00000396521 NENFQ9UMX5 172 aa17.07■□□□□ 0.32
EXOSC3-202ENST00000396521 PSMD13Q9UNM6 376 aa17.07■□□□□ 0.32
EXOSC3-202ENST00000396521 PADI2Q9Y2J8 665 aa17.07■□□□□ 0.32
EXOSC3-202ENST00000396521 TCP11X1B4DZS4 312 aa17.06■□□□□ 0.32
EXOSC3-202ENST00000396521 SLC35G4P0C7Q5 338 aa17.06■□□□□ 0.32
EXOSC3-202ENST00000396521 HLA-DPA1P20036 260 aa17.06■□□□□ 0.32
EXOSC3-202ENST00000396521 MSH3P20585 1137 aa17.06■□□□□ 0.32
EXOSC3-202ENST00000396521 PBX1P40424 430 aa17.06■□□□□ 0.32
EXOSC3-202ENST00000396521 HADHAP40939 763 aa17.06■□□□□ 0.32
EXOSC3-202ENST00000396521 CTSCP53634 463 aa17.06■□□□□ 0.32
EXOSC3-202ENST00000396521 CHAF1BQ13112 559 aa17.06■□□□□ 0.32
EXOSC3-202ENST00000396521 PLEKHS1Q5SXH7 462 aa17.06■□□□□ 0.32
EXOSC3-202ENST00000396521 GPRC6AQ5T6X5 926 aa17.06■□□□□ 0.32
EXOSC3-202ENST00000396521 TTC30BQ8N4P2 665 aa17.06■□□□□ 0.32
EXOSC3-202ENST00000396521 ENDOVQ8N8Q3 282 aaKnown RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms