RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 TGM5O43548 720 aa5.3□□□□□ -1.56
VPS41-203ENST00000395969 DCXO43602 365 aa5.3□□□□□ -1.56
VPS41-203ENST00000395969 CPB1P15086 417 aa5.3□□□□□ -1.56
VPS41-203ENST00000395969 JAK1P23458 1154 aa5.3□□□□□ -1.56
VPS41-203ENST00000395969 CORO1AP31146 461 aaKnown RBP5.3□□□□□ -1.56
VPS41-203ENST00000395969 NRLP54845 237 aa5.3□□□□□ -1.56
VPS41-203ENST00000395969 AGAP7PQ5VUJ5 663 aa5.3□□□□□ -1.56
VPS41-203ENST00000395969 LRRC8EQ6NSJ5 796 aa5.3□□□□□ -1.56
VPS41-203ENST00000395969 TXNDC11Q6PKC3 985 aa5.3□□□□□ -1.56
VPS41-203ENST00000395969 PRSS55Q6UWB4 352 aaPredicted RBP5.3□□□□□ -1.56
VPS41-203ENST00000395969 FRA10AC1Q70Z53 315 aa5.3□□□□□ -1.56
VPS41-203ENST00000395969 GAREM2Q75VX8 874 aa5.3□□□□□ -1.56
VPS41-203ENST00000395969 NRSN1Q8IZ57 195 aa5.3□□□□□ -1.56
VPS41-203ENST00000395969 DSELQ8IZU8 1212 aa5.3□□□□□ -1.56
VPS41-203ENST00000395969 PGAM4Q8N0Y7 254 aa5.3□□□□□ -1.56
VPS41-203ENST00000395969 CADM3Q8N126 398 aa5.3□□□□□ -1.56
VPS41-203ENST00000395969 MINDY2Q8NBR6 621 aa5.3□□□□□ -1.56
VPS41-203ENST00000395969 TFAP2CQ92754 450 aa5.3□□□□□ -1.56
VPS41-203ENST00000395969 TMEM169Q96HH4 297 aa5.3□□□□□ -1.56
VPS41-203ENST00000395969 FCRL1Q96LA6 429 aa5.3□□□□□ -1.56
VPS41-203ENST00000395969 ALPK1Q96QP1 1244 aa5.3□□□□□ -1.56
VPS41-203ENST00000395969 AARSD1Q9BTE6 412 aaKnown RBP5.3□□□□□ -1.56
VPS41-203ENST00000395969 NUSAP1Q9BXS6 441 aaKnown RBP5.3□□□□□ -1.56
VPS41-203ENST00000395969 ADGRE3Q9BY15 652 aa5.3□□□□□ -1.56
VPS41-203ENST00000395969 MRPL46Q9H2W6 279 aaKnown RBP5.3□□□□□ -1.56
VPS41-203ENST00000395969 CXorf21Q9HAI6 301 aa5.3□□□□□ -1.56
VPS41-203ENST00000395969 PARVBQ9HBI1 364 aa5.3□□□□□ -1.56
VPS41-203ENST00000395969 PNPOQ9NVS9 261 aa5.3□□□□□ -1.56
VPS41-203ENST00000395969 SIRT5Q9NXA8 310 aa5.3□□□□□ -1.56
VPS41-203ENST00000395969 KCTD5Q9NXV2 234 aa5.3□□□□□ -1.56
VPS41-203ENST00000395969 IFT52Q9Y366 437 aa5.3□□□□□ -1.56
VPS41-203ENST00000395969 PSAT1Q9Y617 370 aa5.3□□□□□ -1.56
VPS41-203ENST00000395969 CPQQ9Y646 472 aa5.3□□□□□ -1.56
VPS41-203ENST00000395969 TMEM265A0A087WTH1 108 aa5.29□□□□□ -1.56
VPS41-203ENST00000395969 GOLGA8QA0A0J9YX86 632 aa5.29□□□□□ -1.56
VPS41-203ENST00000395969 GOLGA8OA6NCC3 632 aa5.29□□□□□ -1.56
VPS41-203ENST00000395969 GOLGA8NF8WBI6 632 aa5.29□□□□□ -1.56
VPS41-203ENST00000395969 J3KR12 359 aa5.29□□□□□ -1.56
VPS41-203ENST00000395969 ZNF197O14709 1029 aa5.29□□□□□ -1.56
VPS41-203ENST00000395969 SLC9A3R1O14745 358 aaPredicted RBP5.29□□□□□ -1.56
VPS41-203ENST00000395969 AP2A2O94973 939 aa5.29□□□□□ -1.56
VPS41-203ENST00000395969 INMTO95050 263 aa5.29□□□□□ -1.56
VPS41-203ENST00000395969 FGBP02675 491 aa5.29□□□□□ -1.56
VPS41-203ENST00000395969 SERPINF2P08697 491 aa5.29□□□□□ -1.56
VPS41-203ENST00000395969 CISD3P0C7P0 127 aa5.29□□□□□ -1.56
VPS41-203ENST00000395969 ZNF30P17039 623 aa5.29□□□□□ -1.56
VPS41-203ENST00000395969 DPP6P42658 865 aa5.29□□□□□ -1.56
VPS41-203ENST00000395969 PCYT1AP49585 367 aa5.29□□□□□ -1.56
VPS41-203ENST00000395969 NKX2-5P52952 324 aaPredicted RBP5.29□□□□□ -1.56
VPS41-203ENST00000395969 ABCE1P61221 599 aaKnown RBP5.29□□□□□ -1.56
VPS41-203ENST00000395969 DEFB103AP81534 67 aa5.29□□□□□ -1.56
VPS41-203ENST00000395969 ZXDBP98169 803 aa5.29□□□□□ -1.56
VPS41-203ENST00000395969 BNIP3Q12983 259 aa5.29□□□□□ -1.56
VPS41-203ENST00000395969 PMS2P3Q13401 168 aa5.29□□□□□ -1.56
VPS41-203ENST00000395969 CAMK1Q14012 370 aa5.29□□□□□ -1.56
VPS41-203ENST00000395969 NRF1Q16656 503 aa5.29□□□□□ -1.56
VPS41-203ENST00000395969 KRT80Q6KB66 452 aa5.29□□□□□ -1.56
VPS41-203ENST00000395969 VASH1Q7L8A9 365 aaPredicted RBP5.29□□□□□ -1.56
VPS41-203ENST00000395969 IGFN1Q86VF2 1251 aa5.29□□□□□ -1.56
VPS41-203ENST00000395969 ETFBKMTQ8IXQ9 262 aa5.29□□□□□ -1.56
VPS41-203ENST00000395969 NDUFAF2Q8N183 169 aa5.29□□□□□ -1.56
VPS41-203ENST00000395969 EFHBQ8N7U6 833 aa5.29□□□□□ -1.56
VPS41-203ENST00000395969 PPM1NQ8N819 430 aa5.29□□□□□ -1.56
VPS41-203ENST00000395969 KYQ8NBH2 561 aa5.29□□□□□ -1.56
VPS41-203ENST00000395969 ADAM32Q8TC27 787 aa5.29□□□□□ -1.56
VPS41-203ENST00000395969 PPP1R13LQ8WUF5 828 aa5.29□□□□□ -1.56
VPS41-203ENST00000395969 POP5Q969H6 163 aaKnown RBP5.29□□□□□ -1.56
VPS41-203ENST00000395969 KIAA1191Q96A73 305 aa5.29□□□□□ -1.56
VPS41-203ENST00000395969 DCBLD2Q96PD2 775 aa5.29□□□□□ -1.56
VPS41-203ENST00000395969 LENG8Q96PV6 779 aaPredicted RBP5.29□□□□□ -1.56
VPS41-203ENST00000395969 CDRT15Q96T59 188 aa5.29□□□□□ -1.56
VPS41-203ENST00000395969 NELL2Q99435 816 aa5.29□□□□□ -1.56
VPS41-203ENST00000395969 EHD1Q9H4M9 534 aa5.29□□□□□ -1.56
VPS41-203ENST00000395969 IL17CQ9P0M4 197 aa5.29□□□□□ -1.56
VPS41-203ENST00000395969 LUZP4Q9P127 313 aa5.29□□□□□ -1.56
VPS41-203ENST00000395969 FBXO5Q9UKT4 447 aa5.29□□□□□ -1.56
VPS41-203ENST00000395969 PCDHGA3Q9Y5H0 932 aa5.29□□□□□ -1.56
VPS41-203ENST00000395969 CROCCQ5TZA2 2017 aa5.29□□□□□ -1.56
VPS41-203ENST00000395969 GOLGB1Q14789 3259 aaKnown RBP5.29□□□□□ -1.56
VPS41-203ENST00000395969 ANKRD34BA5PLL1 514 aa5.29□□□□□ -1.56
VPS41-203ENST00000395969 PCP4L1A6NKN8 68 aa5.29□□□□□ -1.56
VPS41-203ENST00000395969 J3QRK9 145 aa5.29□□□□□ -1.56
VPS41-203ENST00000395969 KCNK1O00180 336 aa5.29□□□□□ -1.56
VPS41-203ENST00000395969 TNFRSF10AO00220 468 aa5.29□□□□□ -1.56
VPS41-203ENST00000395969 AGRPO00253 132 aa5.29□□□□□ -1.56
VPS41-203ENST00000395969 RGS13O14921 159 aa5.29□□□□□ -1.56
VPS41-203ENST00000395969 AKAP10O43572 662 aa5.29□□□□□ -1.56
VPS41-203ENST00000395969 LZTS3O60299 673 aaPredicted RBP5.29□□□□□ -1.56
VPS41-203ENST00000395969 PQBP1O60828 265 aaKnown RBP5.29□□□□□ -1.56
VPS41-203ENST00000395969 TRIM13O60858 407 aa5.29□□□□□ -1.56
VPS41-203ENST00000395969 VPS4BO75351 444 aa5.29□□□□□ -1.56
VPS41-203ENST00000395969 ESR1P03372 595 aa5.29□□□□□ -1.56
VPS41-203ENST00000395969 C2P06681 752 aa5.29□□□□□ -1.56
VPS41-203ENST00000395969 ENO2P09104 434 aaPredicted RBP5.29□□□□□ -1.56
VPS41-203ENST00000395969 CNPP09543 421 aaKnown RBP5.29□□□□□ -1.56
VPS41-203ENST00000395969 CD1EP15812 388 aa5.29□□□□□ -1.56
VPS41-203ENST00000395969 DDX5P17844 614 aaKnown RBP5.29□□□□□ -1.56
VPS41-203ENST00000395969 NCF2P19878 526 aaPredicted RBP5.29□□□□□ -1.56
VPS41-203ENST00000395969 IMPDH1P20839 514 aa5.29□□□□□ -1.56
VPS41-203ENST00000395969 ME2P23368 584 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms