RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 INHBCP55103 352 aa14.9□□□□□ -0.02
SCAF11-204ENST00000395454 UBAP2LQ14157 1087 aaKnown RBP14.9□□□□□ -0.02
SCAF11-204ENST00000395454 TMEM31Q5JXX7 168 aa14.9□□□□□ -0.02
SCAF11-204ENST00000395454 SH2D4BQ5SQS7 431 aa14.9□□□□□ -0.02
SCAF11-204ENST00000395454 AGBL4Q5VU57 503 aa14.9□□□□□ -0.02
SCAF11-204ENST00000395454 CRTC1Q6UUV9 634 aa14.9□□□□□ -0.02
SCAF11-204ENST00000395454 USP45Q70EL2 814 aa14.9□□□□□ -0.02
SCAF11-204ENST00000395454 KBTBD6Q86V97 674 aa14.9□□□□□ -0.02
SCAF11-204ENST00000395454 CCNYL1Q8N7R7 359 aa14.9□□□□□ -0.02
SCAF11-204ENST00000395454 CADM1Q9BY67 442 aaKnown RBP14.9□□□□□ -0.02
SCAF11-204ENST00000395454 EBF1Q9UH73 591 aa14.9□□□□□ -0.02
SCAF11-204ENST00000395454 TMCO1Q9UM00 188 aa14.9□□□□□ -0.02
SCAF11-204ENST00000395454 NCKAP1Q9Y2A7 1128 aa14.9□□□□□ -0.02
SCAF11-204ENST00000395454 NEMP1O14524 444 aa14.9□□□□□ -0.02
SCAF11-204ENST00000395454 NIPSNAP2O75323 286 aa14.9□□□□□ -0.02
SCAF11-204ENST00000395454 CLDN7O95471 211 aa14.9□□□□□ -0.02
SCAF11-204ENST00000395454 ITGALP20701 1170 aa14.9□□□□□ -0.02
SCAF11-204ENST00000395454 AVPR2P30518 371 aa14.9□□□□□ -0.02
SCAF11-204ENST00000395454 ADSLP30566 484 aaPredicted RBP14.9□□□□□ -0.02
SCAF11-204ENST00000395454 SPAM1P38567 509 aa14.9□□□□□ -0.02
SCAF11-204ENST00000395454 SFSWAPQ12872 951 aaKnown RBP14.9□□□□□ -0.02
SCAF11-204ENST00000395454 UNC50Q53HI1 259 aa14.9□□□□□ -0.02
SCAF11-204ENST00000395454 PIP5KL1Q5T9C9 394 aa14.9□□□□□ -0.02
SCAF11-204ENST00000395454 ZDHHC20Q5W0Z9 365 aa14.9□□□□□ -0.02
SCAF11-204ENST00000395454 UGT3A1Q6NUS8 523 aa14.9□□□□□ -0.02
SCAF11-204ENST00000395454 USP30Q70CQ3 517 aa14.9□□□□□ -0.02
SCAF11-204ENST00000395454 RBFAQ8N0V3 343 aa14.9□□□□□ -0.02
SCAF11-204ENST00000395454 CPSF7Q8N684 471 aaKnown RBP14.9□□□□□ -0.02
SCAF11-204ENST00000395454 DTWD2Q8NBA8 298 aa14.9□□□□□ -0.02
SCAF11-204ENST00000395454 MAGEC3Q8TD91 643 aa14.9□□□□□ -0.02
SCAF11-204ENST00000395454 DTX3LQ8TDB6 740 aa14.9□□□□□ -0.02
SCAF11-204ENST00000395454 OR52B2Q96RD2 323 aa14.9□□□□□ -0.02
SCAF11-204ENST00000395454 SLC30A3Q99726 388 aa14.9□□□□□ -0.02
SCAF11-204ENST00000395454 PCDH12Q9NPG4 1184 aa14.9□□□□□ -0.02
SCAF11-204ENST00000395454 GALPQ9UBC7 116 aa14.9□□□□□ -0.02
SCAF11-204ENST00000395454 TRMT6Q9UJA5 497 aaKnown RBP14.9□□□□□ -0.02
SCAF11-204ENST00000395454 ITM2BQ9Y287 266 aa14.9□□□□□ -0.02
SCAF11-204ENST00000395454 GLYATL1P3A0A0U1RQE8 302 aa14.89□□□□□ -0.03
SCAF11-204ENST00000395454 TRPC5OSA6NMA1 111 aa14.89□□□□□ -0.03
SCAF11-204ENST00000395454 GSC2O15499 205 aa14.89□□□□□ -0.03
SCAF11-204ENST00000395454 ATP6V1G2O95670 118 aa14.89□□□□□ -0.03
SCAF11-204ENST00000395454 C7P10643 843 aa14.89□□□□□ -0.03
SCAF11-204ENST00000395454 NFKBIAP25963 317 aa14.89□□□□□ -0.03
SCAF11-204ENST00000395454 ACRV1P26436 265 aa14.89□□□□□ -0.03
SCAF11-204ENST00000395454 ERAP2Q6P179 960 aa14.89□□□□□ -0.03
SCAF11-204ENST00000395454 FAM151BQ6UXP7 276 aa14.89□□□□□ -0.03
SCAF11-204ENST00000395454 RINLQ6ZS11 566 aa14.89□□□□□ -0.03
SCAF11-204ENST00000395454 SERPINA9Q86WD7 417 aa14.89□□□□□ -0.03
SCAF11-204ENST00000395454 TEX9Q8N6V9 391 aa14.89□□□□□ -0.03
SCAF11-204ENST00000395454 OR14C36Q8NHC7 312 aa14.89□□□□□ -0.03
SCAF11-204ENST00000395454 RLN3Q8WXF3 142 aa14.89□□□□□ -0.03
SCAF11-204ENST00000395454 FUBP1Q96AE4 644 aaKnown RBP14.89□□□□□ -0.03
SCAF11-204ENST00000395454 PLEKHG4BQ96PX9 1271 aa14.89□□□□□ -0.03
SCAF11-204ENST00000395454 CYP4F12Q9HCS2 524 aa14.89□□□□□ -0.03
SCAF11-204ENST00000395454 ITM2CQ9NQX7 267 aa14.89□□□□□ -0.03
SCAF11-204ENST00000395454 ACSS2Q9NR19 701 aa14.89□□□□□ -0.03
SCAF11-204ENST00000395454 PRMT8Q9NR22 394 aaPredicted RBP14.89□□□□□ -0.03
SCAF11-204ENST00000395454 USP36Q9P275 1121 aaKnown RBP14.89□□□□□ -0.03
SCAF11-204ENST00000395454 IKZF3Q9UKT9 509 aa14.89□□□□□ -0.03
SCAF11-204ENST00000395454 CYP8B1Q9UNU6 501 aa14.89□□□□□ -0.03
SCAF11-204ENST00000395454 DHRS7Q9Y394 339 aa14.89□□□□□ -0.03
SCAF11-204ENST00000395454 GOLGA8CPA6NN73 597 aa14.88□□□□□ -0.03
SCAF11-204ENST00000395454 SYCE1LA8MT33 242 aa14.88□□□□□ -0.03
SCAF11-204ENST00000395454 STX16-NPEPL1H3BU86 382 aa14.88□□□□□ -0.03
SCAF11-204ENST00000395454 STX16O14662 325 aa14.88□□□□□ -0.03
SCAF11-204ENST00000395454 GPR39O43194 453 aa14.88□□□□□ -0.03
SCAF11-204ENST00000395454 ZNF217O75362 1048 aa14.88□□□□□ -0.03
SCAF11-204ENST00000395454 ENO1P06733 434 aaKnown RBP14.88□□□□□ -0.03
SCAF11-204ENST00000395454 ZNF7P17097 686 aaPredicted RBP14.88□□□□□ -0.03
SCAF11-204ENST00000395454 LHCGRP22888 699 aa14.88□□□□□ -0.03
SCAF11-204ENST00000395454 MNAT1P51948 309 aa14.88□□□□□ -0.03
SCAF11-204ENST00000395454 LRRC66Q68CR7 880 aa14.88□□□□□ -0.03
SCAF11-204ENST00000395454 MACC1Q6ZN28 852 aa14.88□□□□□ -0.03
SCAF11-204ENST00000395454 TSPAN33Q86UF1 283 aa14.88□□□□□ -0.03
SCAF11-204ENST00000395454 CUZD1Q86UP6 607 aa14.88□□□□□ -0.03
SCAF11-204ENST00000395454 FAM13CQ8NE31 585 aa14.88□□□□□ -0.03
SCAF11-204ENST00000395454 RAB7BQ96AH8 199 aa14.88□□□□□ -0.03
SCAF11-204ENST00000395454 TTC1Q99614 292 aa14.88□□□□□ -0.03
SCAF11-204ENST00000395454 NFKBIL1Q9UBC1 381 aaPredicted RBP14.88□□□□□ -0.03
SCAF11-204ENST00000395454 B4GALT6Q9UBX8 382 aa14.88□□□□□ -0.03
SCAF11-204ENST00000395454 FZD4Q9ULV1 537 aa14.88□□□□□ -0.03
SCAF11-204ENST00000395454 IGLV3-16A0A075B6K0 115 aa14.88□□□□□ -0.03
SCAF11-204ENST00000395454 PRR23AA6NEV1 266 aa14.88□□□□□ -0.03
SCAF11-204ENST00000395454 SDHDO14521 159 aa14.88□□□□□ -0.03
SCAF11-204ENST00000395454 UBFD1O14562 309 aaKnown RBP14.88□□□□□ -0.03
SCAF11-204ENST00000395454 AXIN1O15169 862 aa14.88□□□□□ -0.03
SCAF11-204ENST00000395454 GYG2O15488 501 aa14.88□□□□□ -0.03
SCAF11-204ENST00000395454 JUNP05412 331 aaKnown RBP14.88□□□□□ -0.03
SCAF11-204ENST00000395454 FGF4P08620 206 aa14.88□□□□□ -0.03
SCAF11-204ENST00000395454 CA5AP35218 305 aa14.88□□□□□ -0.03
SCAF11-204ENST00000395454 CPOXP36551 454 aa14.88□□□□□ -0.03
SCAF11-204ENST00000395454 ADPRHP54922 357 aa14.88□□□□□ -0.03
SCAF11-204ENST00000395454 IL2P60568 153 aa14.88□□□□□ -0.03
SCAF11-204ENST00000395454 PTSQ03393 145 aa14.88□□□□□ -0.03
SCAF11-204ENST00000395454 CSTF1Q05048 431 aaKnown RBP14.88□□□□□ -0.03
SCAF11-204ENST00000395454 DMWDQ09019 674 aa14.88□□□□□ -0.03
SCAF11-204ENST00000395454 ELP6Q0PNE2 266 aa14.88□□□□□ -0.03
SCAF11-204ENST00000395454 NAA25Q14CX7 972 aa14.88□□□□□ -0.03
SCAF11-204ENST00000395454 SNCBQ16143 134 aa14.88□□□□□ -0.03
SCAF11-204ENST00000395454 LSM12Q3MHD2 195 aaKnown RBP14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms