RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 RTP3Q9BQQ7 232 aa13.06□□□□□ -0.32
NFKB1-202ENST00000394820 HEPHQ9BQS7 1158 aa13.06□□□□□ -0.32
NFKB1-202ENST00000394820 CHCHD6Q9BRQ6 235 aa13.06□□□□□ -0.32
NFKB1-202ENST00000394820 ZBED2Q9BTP6 218 aa13.06□□□□□ -0.32
NFKB1-202ENST00000394820 CEP44Q9C0F1 390 aa13.06□□□□□ -0.32
NFKB1-202ENST00000394820 RPF2Q9H7B2 306 aaKnown RBP13.06□□□□□ -0.32
NFKB1-202ENST00000394820 ABCC13Q9NSE7 274 aa13.06□□□□□ -0.32
NFKB1-202ENST00000394820 PCDHB3Q9Y5E6 796 aa13.06□□□□□ -0.32
NFKB1-202ENST00000394820 ANK1P16157 1881 aa13.06□□□□□ -0.32
NFKB1-202ENST00000394820 IRAK2O43187 625 aa13.06□□□□□ -0.32
NFKB1-202ENST00000394820 DFNA5O60443 496 aa13.06□□□□□ -0.32
NFKB1-202ENST00000394820 CNOT3O75175 753 aaKnown RBP13.06□□□□□ -0.32
NFKB1-202ENST00000394820 COL6A2P12110 1019 aa13.06□□□□□ -0.32
NFKB1-202ENST00000394820 YBX1P67809 324 aaKnown RBP13.06□□□□□ -0.32
NFKB1-202ENST00000394820 GALNT2Q10471 571 aa13.06□□□□□ -0.32
NFKB1-202ENST00000394820 NFATC3Q12968 1075 aa13.06□□□□□ -0.32
NFKB1-202ENST00000394820 ACAP2Q15057 778 aa13.06□□□□□ -0.32
NFKB1-202ENST00000394820 UNC50Q53HI1 259 aa13.06□□□□□ -0.32
NFKB1-202ENST00000394820 ALFQ53S48 1182 aa13.06□□□□□ -0.32
NFKB1-202ENST00000394820 NEK10Q6ZWH5 1172 aa13.06□□□□□ -0.32
NFKB1-202ENST00000394820 TAGAPQ8N103 731 aa13.06□□□□□ -0.32
NFKB1-202ENST00000394820 TTC30BQ8N4P2 665 aa13.06□□□□□ -0.32
NFKB1-202ENST00000394820 SH3RF2Q8TEC5 729 aa13.06□□□□□ -0.32
NFKB1-202ENST00000394820 ATP13A1Q9HD20 1204 aa13.06□□□□□ -0.32
NFKB1-202ENST00000394820 TPD52L2O43399 206 aaKnown RBP13.05□□□□□ -0.32
NFKB1-202ENST00000394820 ASNA1O43681 348 aa13.05□□□□□ -0.32
NFKB1-202ENST00000394820 WDR47O94967 919 aa13.05□□□□□ -0.32
NFKB1-202ENST00000394820 HOXD8P13378 290 aaPredicted RBP13.05□□□□□ -0.32
NFKB1-202ENST00000394820 SLC6A2P23975 617 aa13.05□□□□□ -0.32
NFKB1-202ENST00000394820 KCNAB2Q13303 367 aa13.05□□□□□ -0.32
NFKB1-202ENST00000394820 DGUOKQ16854 277 aa13.05□□□□□ -0.32
NFKB1-202ENST00000394820 TECRLQ5HYJ1 363 aa13.05□□□□□ -0.32
NFKB1-202ENST00000394820 NTAN1Q96AB6 310 aa13.05□□□□□ -0.32
NFKB1-202ENST00000394820 ACBD6Q9BR61 282 aa13.05□□□□□ -0.32
NFKB1-202ENST00000394820 YIPF2Q9BWQ6 316 aa13.05□□□□□ -0.32
NFKB1-202ENST00000394820 MARCH2Q9P0N8 246 aa13.05□□□□□ -0.32
NFKB1-202ENST00000394820 MTRRQ9UBK8 725 aa13.05□□□□□ -0.32
NFKB1-202ENST00000394820 SAMHD1Q9Y3Z3 626 aaKnown RBP13.05□□□□□ -0.32
NFKB1-202ENST00000394820 CORINQ9Y5Q5 1042 aa13.05□□□□□ -0.32
NFKB1-202ENST00000394820 DNMT3AQ9Y6K1 912 aaPredicted RBP13.05□□□□□ -0.32
NFKB1-202ENST00000394820 MATN3O15232 486 aa13.05□□□□□ -0.32
NFKB1-202ENST00000394820 ECI2O75521 394 aa13.05□□□□□ -0.32
NFKB1-202ENST00000394820 FUCA1P04066 466 aa13.05□□□□□ -0.32
NFKB1-202ENST00000394820 PPM1FP49593 454 aaPredicted RBP13.05□□□□□ -0.32
NFKB1-202ENST00000394820 NCS1P62166 190 aa13.05□□□□□ -0.32
NFKB1-202ENST00000394820 MXD1Q05195 221 aa13.05□□□□□ -0.32
NFKB1-202ENST00000394820 BNIP2Q12982 314 aa13.05□□□□□ -0.32
NFKB1-202ENST00000394820 TRAF3Q13114 568 aa13.05□□□□□ -0.32
NFKB1-202ENST00000394820 LRP8Q14114 963 aa13.05□□□□□ -0.32
NFKB1-202ENST00000394820 OR4D1Q15615 310 aa13.05□□□□□ -0.32
NFKB1-202ENST00000394820 CACHD1Q5VU97 1274 aa13.05□□□□□ -0.32
NFKB1-202ENST00000394820 UGT3A1Q6NUS8 523 aa13.05□□□□□ -0.32
NFKB1-202ENST00000394820 TMEM53Q6P2H8 277 aa13.05□□□□□ -0.32
NFKB1-202ENST00000394820 PRMT9Q6P2P2 845 aa13.05□□□□□ -0.32
NFKB1-202ENST00000394820 ENPP6Q6UWR7 440 aa13.05□□□□□ -0.32
NFKB1-202ENST00000394820 IFNL1Q8IU54 200 aa13.05□□□□□ -0.32
NFKB1-202ENST00000394820 STX19Q8N4C7 294 aa13.05□□□□□ -0.32
NFKB1-202ENST00000394820 HM13Q8TCT9 377 aa13.05□□□□□ -0.32
NFKB1-202ENST00000394820 TEX37Q96LM6 180 aa13.05□□□□□ -0.32
NFKB1-202ENST00000394820 SLC9A7Q96T83 725 aa13.05□□□□□ -0.32
NFKB1-202ENST00000394820 EBPLQ9BY08 206 aa13.05□□□□□ -0.32
NFKB1-202ENST00000394820 CLPBQ9H078 707 aa13.05□□□□□ -0.32
NFKB1-202ENST00000394820 ELOVL6Q9H5J4 265 aa13.05□□□□□ -0.32
NFKB1-202ENST00000394820 FKBPLQ9UIM3 349 aa13.05□□□□□ -0.32
NFKB1-202ENST00000394820 HS3ST4Q9Y661 456 aa13.05□□□□□ -0.32
NFKB1-202ENST00000394820 MANSC4A6NHS7 340 aaPredicted RBP13.04□□□□□ -0.32
NFKB1-202ENST00000394820 UBFD1O14562 309 aaKnown RBP13.04□□□□□ -0.32
NFKB1-202ENST00000394820 FSHRP23945 695 aa13.04□□□□□ -0.32
NFKB1-202ENST00000394820 CTGFP29279 349 aa13.04□□□□□ -0.32
NFKB1-202ENST00000394820 MC4RP32245 332 aa13.04□□□□□ -0.32
NFKB1-202ENST00000394820 SOAT1P35610 550 aa13.04□□□□□ -0.32
NFKB1-202ENST00000394820 COPZ1P61923 177 aa13.04□□□□□ -0.32
NFKB1-202ENST00000394820 MAPRE1Q15691 268 aaKnown RBP13.04□□□□□ -0.32
NFKB1-202ENST00000394820 ZNF678Q5SXM1 525 aa13.04□□□□□ -0.32
NFKB1-202ENST00000394820 FAM45BPQ6NSW5 357 aa13.04□□□□□ -0.32
NFKB1-202ENST00000394820 PPP4R4Q6NUP7 873 aa13.04□□□□□ -0.32
NFKB1-202ENST00000394820 RGMBQ6NW40 437 aa13.04□□□□□ -0.32
NFKB1-202ENST00000394820 TBPL2Q6SJ96 375 aa13.04□□□□□ -0.32
NFKB1-202ENST00000394820 CARNMT1Q8N4J0 409 aa13.04□□□□□ -0.32
NFKB1-202ENST00000394820 FAM45AQ8TCE6 357 aa13.04□□□□□ -0.32
NFKB1-202ENST00000394820 NPLQ9BXD5 320 aaPredicted RBP13.04□□□□□ -0.32
NFKB1-202ENST00000394820 FAM124BQ9H5Z6 455 aaPredicted RBP13.04□□□□□ -0.32
NFKB1-202ENST00000394820 SCUBE2Q9NQ36 999 aa13.04□□□□□ -0.32
NFKB1-202ENST00000394820 SLC45A1Q9Y2W3 748 aa13.04□□□□□ -0.32
NFKB1-202ENST00000394820 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.04□□□□□ -0.32
NFKB1-202ENST00000394820 WDR90Q96KV7 1748 aa13.04□□□□□ -0.32
NFKB1-202ENST00000394820 NDUFS2O75306 463 aa13.04□□□□□ -0.32
NFKB1-202ENST00000394820 RPL17P18621 184 aaKnown RBP13.04□□□□□ -0.32
NFKB1-202ENST00000394820 HLA-DPA1P20036 260 aa13.04□□□□□ -0.32
NFKB1-202ENST00000394820 RPL9P32969 192 aaKnown RBP13.04□□□□□ -0.32
NFKB1-202ENST00000394820 HTR6P50406 440 aa13.04□□□□□ -0.32
NFKB1-202ENST00000394820 HERVK_113P63132 956 aa13.04□□□□□ -0.32
NFKB1-202ENST00000394820 LCP2Q13094 533 aa13.04□□□□□ -0.32
NFKB1-202ENST00000394820 SIRPB2Q5JXA9 342 aa13.04□□□□□ -0.32
NFKB1-202ENST00000394820 BTLAQ7Z6A9 289 aa13.04□□□□□ -0.32
NFKB1-202ENST00000394820 GPR156Q8NFN8 814 aa13.04□□□□□ -0.32
NFKB1-202ENST00000394820 EEF1AKMT1Q8WVE0 214 aa13.04□□□□□ -0.32
NFKB1-202ENST00000394820 TFAP2CQ92754 450 aa13.04□□□□□ -0.32
NFKB1-202ENST00000394820 NT5C3BQ969T7 300 aa13.04□□□□□ -0.32
NFKB1-202ENST00000394820 ZNF597Q96LX8 424 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms