RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 ZIC5Q96T25 663 aa11.52□□□□□ -0.57
UBE2D3-209ENST00000394804 C2orf49Q9BVC5 232 aaPredicted RBP11.52□□□□□ -0.57
UBE2D3-209ENST00000394804 CACYBPQ9HB71 228 aaKnown RBP11.52□□□□□ -0.57
UBE2D3-209ENST00000394804 ARNT2Q9HBZ2 717 aa11.52□□□□□ -0.57
UBE2D3-209ENST00000394804 SDR39U1Q9NRG7 319 aaPredicted RBP11.52□□□□□ -0.57
UBE2D3-209ENST00000394804 SCHIP1Q9P0W5 487 aaPredicted RBP11.52□□□□□ -0.57
UBE2D3-209ENST00000394804 MOXD2PA6NHM9 499 aa11.52□□□□□ -0.57
UBE2D3-209ENST00000394804 A8MX80 341 aa11.52□□□□□ -0.57
UBE2D3-209ENST00000394804 SYN3O14994 580 aa11.52□□□□□ -0.57
UBE2D3-209ENST00000394804 ANGPTL1O95841 491 aa11.52□□□□□ -0.57
UBE2D3-209ENST00000394804 IGSF6O95976 241 aa11.52□□□□□ -0.57
UBE2D3-209ENST00000394804 C1RP00736 705 aa11.52□□□□□ -0.57
UBE2D3-209ENST00000394804 NR4A1P22736 598 aa11.52□□□□□ -0.57
UBE2D3-209ENST00000394804 VARSP26640 1264 aaKnown RBP11.52□□□□□ -0.57
UBE2D3-209ENST00000394804 ARSFP54793 590 aa11.52□□□□□ -0.57
UBE2D3-209ENST00000394804 RAB39AQ14964 217 aa11.52□□□□□ -0.57
UBE2D3-209ENST00000394804 COLGALT2Q8IYK4 626 aa11.52□□□□□ -0.57
UBE2D3-209ENST00000394804 FNDC8Q8TC99 324 aa11.52□□□□□ -0.57
UBE2D3-209ENST00000394804 C8orf48Q96LL4 319 aa11.52□□□□□ -0.57
UBE2D3-209ENST00000394804 TSSK3Q96PN8 268 aa11.52□□□□□ -0.57
UBE2D3-209ENST00000394804 CSNK1G1Q9HCP0 422 aa11.52□□□□□ -0.57
UBE2D3-209ENST00000394804 CCNB1IP1Q9NPC3 277 aa11.52□□□□□ -0.57
UBE2D3-209ENST00000394804 TMLHEQ9NVH6 421 aa11.52□□□□□ -0.57
UBE2D3-209ENST00000394804 ADPRHL2Q9NX46 363 aa11.52□□□□□ -0.57
UBE2D3-209ENST00000394804 SAMD4AQ9UPU9 718 aaKnown RBP11.52□□□□□ -0.57
UBE2D3-209ENST00000394804 SAMHD1Q9Y3Z3 626 aaKnown RBP11.52□□□□□ -0.57
UBE2D3-209ENST00000394804 CLDN25C9JDP6 229 aa11.51□□□□□ -0.57
UBE2D3-209ENST00000394804 SLC25A14O95258 325 aaPredicted RBP11.51□□□□□ -0.57
UBE2D3-209ENST00000394804 SEC24AO95486 1093 aa11.51□□□□□ -0.57
UBE2D3-209ENST00000394804 FTH1P02794 183 aa11.51□□□□□ -0.57
UBE2D3-209ENST00000394804 CKMP06732 381 aa11.51□□□□□ -0.57
UBE2D3-209ENST00000394804 IGFBP5P24593 272 aa11.51□□□□□ -0.57
UBE2D3-209ENST00000394804 HTR1EP28566 365 aa11.51□□□□□ -0.57
UBE2D3-209ENST00000394804 ADRA1AP35348 466 aa11.51□□□□□ -0.57
UBE2D3-209ENST00000394804 INPP1P49441 399 aa11.51□□□□□ -0.57
UBE2D3-209ENST00000394804 AGTR2P50052 363 aa11.51□□□□□ -0.57
UBE2D3-209ENST00000394804 DAB2P98082 770 aa11.51□□□□□ -0.57
UBE2D3-209ENST00000394804 INO80DQ53TQ3 878 aaPredicted RBP11.51□□□□□ -0.57
UBE2D3-209ENST00000394804 C6orf136Q5SQH8 315 aa11.51□□□□□ -0.57
UBE2D3-209ENST00000394804 LYPLAL1Q5VWZ2 237 aa11.51□□□□□ -0.57
UBE2D3-209ENST00000394804 GDF6Q6KF10 455 aaPredicted RBP11.51□□□□□ -0.57
UBE2D3-209ENST00000394804 ANKS3Q6ZW76 656 aa11.51□□□□□ -0.57
UBE2D3-209ENST00000394804 CARM1Q86X55 608 aa11.51□□□□□ -0.57
UBE2D3-209ENST00000394804 ALDH16A1Q8IZ83 802 aa11.51□□□□□ -0.57
UBE2D3-209ENST00000394804 NELL1Q92832 810 aa11.51□□□□□ -0.57
UBE2D3-209ENST00000394804 DDX28Q9NUL7 540 aaKnown RBP11.51□□□□□ -0.57
UBE2D3-209ENST00000394804 CMTM6Q9NX76 183 aa11.51□□□□□ -0.57
UBE2D3-209ENST00000394804 EBF1Q9UH73 591 aa11.51□□□□□ -0.57
UBE2D3-209ENST00000394804 CDC14AQ9UNH5 594 aa11.51□□□□□ -0.57
UBE2D3-209ENST00000394804 A0A1B0GVM2 712 aa11.51□□□□□ -0.57
UBE2D3-209ENST00000394804 H0YAE9 185 aa11.51□□□□□ -0.57
UBE2D3-209ENST00000394804 TRIM24O15164 1050 aa11.51□□□□□ -0.57
UBE2D3-209ENST00000394804 NOBOXO60393 691 aa11.51□□□□□ -0.57
UBE2D3-209ENST00000394804 CYP4B1P13584 511 aa11.51□□□□□ -0.57
UBE2D3-209ENST00000394804 COX7A2P14406 83 aa11.51□□□□□ -0.57
UBE2D3-209ENST00000394804 STT3AP46977 705 aa11.51□□□□□ -0.57
UBE2D3-209ENST00000394804 GPR15P49685 360 aa11.51□□□□□ -0.57
UBE2D3-209ENST00000394804 ACSM2AQ08AH3 577 aa11.51□□□□□ -0.57
UBE2D3-209ENST00000394804 HSPA14Q0VDF9 509 aa11.51□□□□□ -0.57
UBE2D3-209ENST00000394804 SMARCB1Q12824 385 aa11.51□□□□□ -0.57
UBE2D3-209ENST00000394804 TRAF3Q13114 568 aa11.51□□□□□ -0.57
UBE2D3-209ENST00000394804 XKR4Q5GH76 650 aa11.51□□□□□ -0.57
UBE2D3-209ENST00000394804 KANK2Q63ZY3 851 aa11.51□□□□□ -0.57
UBE2D3-209ENST00000394804 ACSM2BQ68CK6 577 aa11.51□□□□□ -0.57
UBE2D3-209ENST00000394804 DENND5AQ6IQ26 1287 aa11.51□□□□□ -0.57
UBE2D3-209ENST00000394804 ZCCHC8Q6NZY4 707 aaKnown RBP11.51□□□□□ -0.57
UBE2D3-209ENST00000394804 SZRD1Q7Z422 152 aa11.51□□□□□ -0.57
UBE2D3-209ENST00000394804 MFSD2AQ8NA29 543 aa11.51□□□□□ -0.57
UBE2D3-209ENST00000394804 SMYD1Q8NB12 490 aa11.51□□□□□ -0.57
UBE2D3-209ENST00000394804 C3orf58Q8NDZ4 430 aa11.51□□□□□ -0.57
UBE2D3-209ENST00000394804 MYO19Q96H55 970 aa11.51□□□□□ -0.57
UBE2D3-209ENST00000394804 CAPNS2Q96L46 248 aa11.51□□□□□ -0.57
UBE2D3-209ENST00000394804 B3GALT6Q96L58 329 aa11.51□□□□□ -0.57
UBE2D3-209ENST00000394804 CIPCQ9C0C6 399 aa11.51□□□□□ -0.57
UBE2D3-209ENST00000394804 CEP44Q9C0F1 390 aa11.51□□□□□ -0.57
UBE2D3-209ENST00000394804 SOX17Q9H6I2 414 aaPredicted RBP11.51□□□□□ -0.57
UBE2D3-209ENST00000394804 CREBZFQ9NS37 354 aa11.51□□□□□ -0.57
UBE2D3-209ENST00000394804 SPASTQ9UBP0 616 aa11.51□□□□□ -0.57
UBE2D3-209ENST00000394804 GNG14A0A1W2PPG7 69 aa11.51□□□□□ -0.57
UBE2D3-209ENST00000394804 C5orf58C9J3I9 102 aa11.51□□□□□ -0.57
UBE2D3-209ENST00000394804 SCAMP3O14828 347 aaKnown RBP11.51□□□□□ -0.57
UBE2D3-209ENST00000394804 CNOT3O75175 753 aaKnown RBP11.51□□□□□ -0.57
UBE2D3-209ENST00000394804 IL6P05231 212 aa11.51□□□□□ -0.57
UBE2D3-209ENST00000394804 NFKB2Q00653 900 aa11.51□□□□□ -0.57
UBE2D3-209ENST00000394804 KRR1Q13601 381 aaKnown RBP11.51□□□□□ -0.57
UBE2D3-209ENST00000394804 LDLRAD1Q5T700 205 aa11.51□□□□□ -0.57
UBE2D3-209ENST00000394804 FAM171BQ6P995 826 aa11.51□□□□□ -0.57
UBE2D3-209ENST00000394804 TTC23LQ6PF05 361 aa11.51□□□□□ -0.57
UBE2D3-209ENST00000394804 PELI3Q8N2H9 469 aa11.51□□□□□ -0.57
UBE2D3-209ENST00000394804 LIX1Q8N485 282 aa11.51□□□□□ -0.57
UBE2D3-209ENST00000394804 STX19Q8N4C7 294 aa11.51□□□□□ -0.57
UBE2D3-209ENST00000394804 METTL25Q8N6Q8 603 aa11.51□□□□□ -0.57
UBE2D3-209ENST00000394804 EEF1AKMT1Q8WVE0 214 aa11.51□□□□□ -0.57
UBE2D3-209ENST00000394804 C3orf30Q96M34 536 aa11.51□□□□□ -0.57
UBE2D3-209ENST00000394804 TBCCD1Q9NVR7 557 aa11.51□□□□□ -0.57
UBE2D3-209ENST00000394804 NLE1Q9NVX2 485 aaPredicted RBP11.51□□□□□ -0.57
UBE2D3-209ENST00000394804 TRNAU1APQ9NX07 287 aaKnown RBP11.51□□□□□ -0.57
UBE2D3-209ENST00000394804 PSME2Q9UL46 239 aa11.51□□□□□ -0.57
UBE2D3-209ENST00000394804 SH3PXD2BA1X283 911 aa11.5□□□□□ -0.57
UBE2D3-209ENST00000394804 FFAR2O15552 330 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms