RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 PCDHAC1Q9H158 963 aa5.63□□□□□ -1.51
RFFL-202ENST00000394597 NMUR1Q9HB89 426 aa5.63□□□□□ -1.51
RFFL-202ENST00000394597 CSNK1G1Q9HCP0 422 aa5.63□□□□□ -1.51
RFFL-202ENST00000394597 COQ3Q9NZJ6 369 aa5.63□□□□□ -1.51
RFFL-202ENST00000394597 IFT80Q9P2H3 777 aaPredicted RBP5.63□□□□□ -1.51
RFFL-202ENST00000394597 VTI1BQ9UEU0 232 aa5.63□□□□□ -1.51
RFFL-202ENST00000394597 ANAPC2Q9UJX6 822 aa5.63□□□□□ -1.51
RFFL-202ENST00000394597 CRYL1Q9Y2S2 319 aa5.63□□□□□ -1.51
RFFL-202ENST00000394597 SNX8Q9Y5X2 465 aa5.63□□□□□ -1.51
RFFL-202ENST00000394597 TBC1D3BA6NDS4 549 aa5.63□□□□□ -1.51
RFFL-202ENST00000394597 PRR23AA6NEV1 266 aa5.63□□□□□ -1.51
RFFL-202ENST00000394597 C12orf71A8MTZ7 269 aa5.63□□□□□ -1.51
RFFL-202ENST00000394597 A8MV72 311 aaPredicted RBP5.63□□□□□ -1.51
RFFL-202ENST00000394597 FAM72CH0Y354 149 aa5.63□□□□□ -1.51
RFFL-202ENST00000394597 H3BMQ9 156 aa5.63□□□□□ -1.51
RFFL-202ENST00000394597 HTRA2O43464 458 aaPredicted RBP5.63□□□□□ -1.51
RFFL-202ENST00000394597 HS6ST1O60243 411 aa5.63□□□□□ -1.51
RFFL-202ENST00000394597 FAM20BO75063 409 aa5.63□□□□□ -1.51
RFFL-202ENST00000394597 NDST3O95803 873 aa5.63□□□□□ -1.51
RFFL-202ENST00000394597 CLIC3O95833 236 aa5.63□□□□□ -1.51
RFFL-202ENST00000394597 S100A9P06702 114 aaKnown RBP5.63□□□□□ -1.51
RFFL-202ENST00000394597 SLC13A2Q13183 592 aa5.63□□□□□ -1.51
RFFL-202ENST00000394597 GPM6BQ13491 265 aa5.63□□□□□ -1.51
RFFL-202ENST00000394597 GALNT3Q14435 633 aa5.63□□□□□ -1.51
RFFL-202ENST00000394597 FAM72AQ5TYM5 149 aa5.63□□□□□ -1.51
RFFL-202ENST00000394597 TXNDC8Q6A555 127 aa5.63□□□□□ -1.51
RFFL-202ENST00000394597 FAM72DQ6L9T8 149 aa5.63□□□□□ -1.51
RFFL-202ENST00000394597 PAQR9Q6ZVX9 377 aa5.63□□□□□ -1.51
RFFL-202ENST00000394597 USP45Q70EL2 814 aa5.63□□□□□ -1.51
RFFL-202ENST00000394597 FAM72BQ86X60 149 aa5.63□□□□□ -1.51
RFFL-202ENST00000394597 SLC22A9Q8IVM8 553 aa5.63□□□□□ -1.51
RFFL-202ENST00000394597 TNS4Q8IZW8 715 aa5.63□□□□□ -1.51
RFFL-202ENST00000394597 ZMIZ2Q8NF64 920 aa5.63□□□□□ -1.51
RFFL-202ENST00000394597 BADQ92934 168 aa5.63□□□□□ -1.51
RFFL-202ENST00000394597 PGAP3Q96FM1 320 aaPredicted RBP5.63□□□□□ -1.51
RFFL-202ENST00000394597 MED30Q96HR3 178 aa5.63□□□□□ -1.51
RFFL-202ENST00000394597 COG8Q96MW5 612 aa5.63□□□□□ -1.51
RFFL-202ENST00000394597 ZNF599Q96NL3 588 aa5.63□□□□□ -1.51
RFFL-202ENST00000394597 HERPUD2Q9BSE4 406 aa5.63□□□□□ -1.51
RFFL-202ENST00000394597 ZDHHC6Q9H6R6 413 aa5.63□□□□□ -1.51
RFFL-202ENST00000394597 DNAJC28Q9NX36 388 aa5.63□□□□□ -1.51
RFFL-202ENST00000394597 ADPRHL2Q9NX46 363 aa5.63□□□□□ -1.51
RFFL-202ENST00000394597 MRPL39Q9NYK5 338 aaKnown RBP5.63□□□□□ -1.51
RFFL-202ENST00000394597 NCKIPSDQ9NZQ3 722 aa5.63□□□□□ -1.51
RFFL-202ENST00000394597 FETUBQ9UGM5 382 aa5.63□□□□□ -1.51
RFFL-202ENST00000394597 MFHAS1Q9Y4C4 1052 aa5.63□□□□□ -1.51
RFFL-202ENST00000394597 PCDHB9Q9Y5E1 797 aa5.63□□□□□ -1.51
RFFL-202ENST00000394597 KIF13BQ9NQT8 1826 aa5.62□□□□□ -1.51
RFFL-202ENST00000394597 KIAA1217Q5T5P2 1943 aa5.62□□□□□ -1.51
RFFL-202ENST00000394597 A0A1W2PRU2 124 aa5.62□□□□□ -1.51
RFFL-202ENST00000394597 NEDD8-MDP1E9PL57 170 aa5.62□□□□□ -1.51
RFFL-202ENST00000394597 LOC110117498-PIK3R3F6TDL0 507 aa5.62□□□□□ -1.51
RFFL-202ENST00000394597 F8W810 466 aa5.62□□□□□ -1.51
RFFL-202ENST00000394597 STX16-NPEPL1H3BU86 382 aa5.62□□□□□ -1.51
RFFL-202ENST00000394597 ZW10O43264 779 aa5.62□□□□□ -1.51
RFFL-202ENST00000394597 SYNCRIPO60506 623 aaKnown RBP5.62□□□□□ -1.51
RFFL-202ENST00000394597 SORBS2O94875 1100 aaKnown RBP5.62□□□□□ -1.51
RFFL-202ENST00000394597 PIRTP0C851 137 aa5.62□□□□□ -1.51
RFFL-202ENST00000394597 FMO4P31512 558 aa5.62□□□□□ -1.51
RFFL-202ENST00000394597 ABCG1P45844 678 aa5.62□□□□□ -1.51
RFFL-202ENST00000394597 RPS9P46781 194 aaKnown RBP5.62□□□□□ -1.51
RFFL-202ENST00000394597 CLCN5P51795 746 aa5.62□□□□□ -1.51
RFFL-202ENST00000394597 RPS24P62847 133 aaKnown RBP5.62□□□□□ -1.51
RFFL-202ENST00000394597 RING1Q06587 406 aa5.62□□□□□ -1.51
RFFL-202ENST00000394597 DSC1Q08554 894 aa5.62□□□□□ -1.51
RFFL-202ENST00000394597 EIF2B5Q13144 721 aaKnown RBP5.62□□□□□ -1.51
RFFL-202ENST00000394597 CTBP1Q13363 440 aa5.62□□□□□ -1.51
RFFL-202ENST00000394597 TOP3AQ13472 1001 aaPredicted RBP5.62□□□□□ -1.51
RFFL-202ENST00000394597 E2F2Q14209 437 aa5.62□□□□□ -1.51
RFFL-202ENST00000394597 RFTN1Q14699 578 aaPredicted RBP5.62□□□□□ -1.51
RFFL-202ENST00000394597 FNDC3BQ53EP0 1204 aaKnown RBP5.62□□□□□ -1.51
RFFL-202ENST00000394597 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.62□□□□□ -1.51
RFFL-202ENST00000394597 KIAA0408Q6ZU52 694 aa5.62□□□□□ -1.51
RFFL-202ENST00000394597 VASH1Q7L8A9 365 aaPredicted RBP5.62□□□□□ -1.51
RFFL-202ENST00000394597 DSG4Q86SJ6 1040 aa5.62□□□□□ -1.51
RFFL-202ENST00000394597 TMEM126BQ8IUX1 230 aa5.62□□□□□ -1.51
RFFL-202ENST00000394597 SCML4Q8N228 414 aa5.62□□□□□ -1.51
RFFL-202ENST00000394597 STK40Q8N2I9 435 aa5.62□□□□□ -1.51
RFFL-202ENST00000394597 PHTF2Q8N3S3 785 aa5.62□□□□□ -1.51
RFFL-202ENST00000394597 LEMD2Q8NC56 503 aa5.62□□□□□ -1.51
RFFL-202ENST00000394597 C19orf18Q8NEA5 215 aa5.62□□□□□ -1.51
RFFL-202ENST00000394597 TOP1MTQ969P6 601 aa5.62□□□□□ -1.51
RFFL-202ENST00000394597 CCDC106Q9BWC9 280 aa5.62□□□□□ -1.51
RFFL-202ENST00000394597 SLC7A5P2Q9GIP4 190 aa5.62□□□□□ -1.51
RFFL-202ENST00000394597 CERS4Q9HA82 394 aa5.62□□□□□ -1.51
RFFL-202ENST00000394597 PAQR5Q9NXK6 330 aaPredicted RBP5.62□□□□□ -1.51
RFFL-202ENST00000394597 KLHL3Q9UH77 587 aa5.62□□□□□ -1.51
RFFL-202ENST00000394597 RAPGEFL1Q9UHV5 662 aa5.62□□□□□ -1.51
RFFL-202ENST00000394597 ZMYM5Q9UJ78 669 aa5.62□□□□□ -1.51
RFFL-202ENST00000394597 MAFFQ9ULX9 164 aa5.62□□□□□ -1.51
RFFL-202ENST00000394597 ISPDA4D126 451 aa5.62□□□□□ -1.51
RFFL-202ENST00000394597 EFCAB10A6NFE3 127 aa5.62□□□□□ -1.51
RFFL-202ENST00000394597 KLF11O14901 512 aa5.62□□□□□ -1.51
RFFL-202ENST00000394597 INSIG1O15503 277 aa5.62□□□□□ -1.51
RFFL-202ENST00000394597 RFPL2O75678 378 aa5.62□□□□□ -1.51
RFFL-202ENST00000394597 ATE1O95260 518 aa5.62□□□□□ -1.51
RFFL-202ENST00000394597 ADH1CP00326 375 aa5.62□□□□□ -1.51
RFFL-202ENST00000394597 SMIM18P0DKX4 95 aa5.62□□□□□ -1.51
RFFL-202ENST00000394597 IL32P24001 234 aa5.62□□□□□ -1.51
RFFL-202ENST00000394597 CRHR1P34998 444 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms