RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 FNDC3AQ9Y2H6 1198 aaKnown RBP18.58■□□□□ 0.57
CBX1-202ENST00000393408 IFRD1O00458 451 aaPredicted RBP18.58■□□□□ 0.56
CBX1-202ENST00000393408 OR7A17O14581 309 aa18.58■□□□□ 0.56
CBX1-202ENST00000393408 RSL1D1O76021 490 aaKnown RBP18.58■□□□□ 0.56
CBX1-202ENST00000393408 JUNBP17275 347 aaPredicted RBP18.58■□□□□ 0.56
CBX1-202ENST00000393408 CLCN7P51798 805 aa18.58■□□□□ 0.56
CBX1-202ENST00000393408 PTPRRQ15256 657 aa18.58■□□□□ 0.56
CBX1-202ENST00000393408 GOLGA7Q7Z5G4 137 aa18.58■□□□□ 0.56
CBX1-202ENST00000393408 FAM126BQ8IXS8 530 aa18.58■□□□□ 0.56
CBX1-202ENST00000393408 TTC30BQ8N4P2 665 aa18.58■□□□□ 0.56
CBX1-202ENST00000393408 EFHBQ8N7U6 833 aa18.58■□□□□ 0.56
CBX1-202ENST00000393408 HBEGFQ99075 208 aa18.58■□□□□ 0.56
CBX1-202ENST00000393408 RETREG1Q9H6L5 497 aa18.58■□□□□ 0.56
CBX1-202ENST00000393408 FAIMQ9NVQ4 179 aa18.58■□□□□ 0.56
CBX1-202ENST00000393408 COMMD10Q9Y6G5 202 aa18.58■□□□□ 0.56
CBX1-202ENST00000393408 ANKRD66B4E2M5 251 aa18.57■□□□□ 0.56
CBX1-202ENST00000393408 STX7O15400 261 aaKnown RBP18.57■□□□□ 0.56
CBX1-202ENST00000393408 B4GAT1O43505 415 aa18.57■□□□□ 0.56
CBX1-202ENST00000393408 ESR1P03372 595 aa18.57■□□□□ 0.56
CBX1-202ENST00000393408 THRBP10828 461 aa18.57■□□□□ 0.56
CBX1-202ENST00000393408 ARL1P40616 181 aaPredicted RBP18.57■□□□□ 0.56
CBX1-202ENST00000393408 NR6A1Q15406 480 aa18.57■□□□□ 0.56
CBX1-202ENST00000393408 AAK1Q2M2I8 961 aa18.57■□□□□ 0.56
CBX1-202ENST00000393408 FAM98BQ52LJ0 330 aaKnown RBP18.57■□□□□ 0.56
CBX1-202ENST00000393408 MFSD14CQ5VZR4 134 aa18.57■□□□□ 0.56
CBX1-202ENST00000393408 OR4F6Q8NGB9 312 aa18.57■□□□□ 0.56
CBX1-202ENST00000393408 OR8J3Q8NGG0 315 aa18.57■□□□□ 0.56
CBX1-202ENST00000393408 ZNF583Q96ND8 569 aa18.57■□□□□ 0.56
CBX1-202ENST00000393408 FAM193BQ96PV7 902 aaPredicted RBP18.57■□□□□ 0.56
CBX1-202ENST00000393408 TBCCD1Q9NVR7 557 aa18.57■□□□□ 0.56
CBX1-202ENST00000393408 COMMD8Q9NX08 183 aa18.57■□□□□ 0.56
CBX1-202ENST00000393408 POLR3HQ9Y535 204 aaPredicted RBP18.57■□□□□ 0.56
CBX1-202ENST00000393408 IQCF5A8MTL0 148 aa18.57■□□□□ 0.56
CBX1-202ENST00000393408 SEPT4O43236 478 aa18.57■□□□□ 0.56
CBX1-202ENST00000393408 INHBBP09529 407 aa18.57■□□□□ 0.56
CBX1-202ENST00000393408 MBL2P11226 248 aaPredicted RBP18.57■□□□□ 0.56
CBX1-202ENST00000393408 JAK1P23458 1154 aa18.57■□□□□ 0.56
CBX1-202ENST00000393408 PTGER3P43115 390 aa18.57■□□□□ 0.56
CBX1-202ENST00000393408 KIAA0040Q15053 153 aa18.57■□□□□ 0.56
CBX1-202ENST00000393408 ANKDD1AQ495B1 522 aa18.57■□□□□ 0.56
CBX1-202ENST00000393408 RSPO2Q6UXX9 243 aaPredicted RBP18.57■□□□□ 0.56
CBX1-202ENST00000393408 RNF19BQ6ZMZ0 732 aa18.57■□□□□ 0.56
CBX1-202ENST00000393408 SMYD1Q8NB12 490 aa18.57■□□□□ 0.56
CBX1-202ENST00000393408 GIPC2Q8TF65 315 aa18.57■□□□□ 0.56
CBX1-202ENST00000393408 PDLIM5Q96HC4 596 aaKnown RBP18.57■□□□□ 0.56
CBX1-202ENST00000393408 CCDC115Q96NT0 180 aa18.57■□□□□ 0.56
CBX1-202ENST00000393408 GPR62Q9BZJ7 368 aa18.57■□□□□ 0.56
CBX1-202ENST00000393408 P2RY12Q9H244 342 aa18.57■□□□□ 0.56
CBX1-202ENST00000393408 SMPD4Q9NXE4 827 aa18.57■□□□□ 0.56
CBX1-202ENST00000393408 MAGED1Q9Y5V3 778 aaPredicted RBP18.57■□□□□ 0.56
CBX1-202ENST00000393408 H7C0S8 307 aa18.56■□□□□ 0.56
CBX1-202ENST00000393408 PCNAP12004 261 aa18.56■□□□□ 0.56
CBX1-202ENST00000393408 FAM189BP81408 668 aa18.56■□□□□ 0.56
CBX1-202ENST00000393408 CHRNB3Q05901 458 aa18.56■□□□□ 0.56
CBX1-202ENST00000393408 AP5B1Q2VPB7 878 aa18.56■□□□□ 0.56
CBX1-202ENST00000393408 STK32CQ86UX6 486 aa18.56■□□□□ 0.56
CBX1-202ENST00000393408 ADGRE3Q9BY15 652 aa18.56■□□□□ 0.56
CBX1-202ENST00000393408 CARS2Q9HA77 564 aaKnown RBP18.56■□□□□ 0.56
CBX1-202ENST00000393408 TNPO3Q9Y5L0 923 aaKnown RBP18.56■□□□□ 0.56
CBX1-202ENST00000393408 A0A0U1RQS6 177 aa18.55■□□□□ 0.56
CBX1-202ENST00000393408 MANSC4A6NHS7 340 aaPredicted RBP18.55■□□□□ 0.56
CBX1-202ENST00000393408 SEC14L2O76054 403 aa18.55■□□□□ 0.56
CBX1-202ENST00000393408 CNPP09543 421 aaKnown RBP18.55■□□□□ 0.56
CBX1-202ENST00000393408 MATN1P21941 496 aa18.55■□□□□ 0.56
CBX1-202ENST00000393408 NFKBIAP25963 317 aa18.55■□□□□ 0.56
CBX1-202ENST00000393408 MTHFRP42898 656 aa18.55■□□□□ 0.56
CBX1-202ENST00000393408 TRAF2Q12933 501 aa18.55■□□□□ 0.56
CBX1-202ENST00000393408 TRIM32Q13049 653 aa18.55■□□□□ 0.56
CBX1-202ENST00000393408 GPR17Q13304 367 aa18.55■□□□□ 0.56
CBX1-202ENST00000393408 GTF2H2Q13888 395 aa18.55■□□□□ 0.56
CBX1-202ENST00000393408 ABRAXAS2Q15018 415 aa18.55■□□□□ 0.56
CBX1-202ENST00000393408 ZNF829Q3KNS6 432 aaPredicted RBP18.55■□□□□ 0.56
CBX1-202ENST00000393408 PLA2G4EQ3MJ16 856 aa18.55■□□□□ 0.56
CBX1-202ENST00000393408 RFTN2Q52LD8 501 aaPredicted RBP18.55■□□□□ 0.56
CBX1-202ENST00000393408 ANKRD26P1Q6NSI1 321 aa18.55■□□□□ 0.56
CBX1-202ENST00000393408 GTF2H2CQ6P1K8 395 aa18.55■□□□□ 0.56
CBX1-202ENST00000393408 SBSNQ6UWP8 590 aa18.55■□□□□ 0.56
CBX1-202ENST00000393408 FRA10AC1Q70Z53 315 aa18.55■□□□□ 0.56
CBX1-202ENST00000393408 TAS2R42Q7RTR8 314 aa18.55■□□□□ 0.56
CBX1-202ENST00000393408 ZNF554Q86TJ5 538 aa18.55■□□□□ 0.56
CBX1-202ENST00000393408 CLEC4FQ8N1N0 589 aa18.55■□□□□ 0.56
CBX1-202ENST00000393408 AADATQ8N5Z0 425 aa18.55■□□□□ 0.56
CBX1-202ENST00000393408 TANKQ92844 425 aa18.55■□□□□ 0.56
CBX1-202ENST00000393408 BORCS5Q969J3 196 aa18.55■□□□□ 0.56
CBX1-202ENST00000393408 FANCEQ9HB96 536 aa18.55■□□□□ 0.56
CBX1-202ENST00000393408 DHRS7Q9Y394 339 aa18.55■□□□□ 0.56
CBX1-202ENST00000393408 ILVBLA1L0T0 632 aa18.55■□□□□ 0.56
CBX1-202ENST00000393408 GPR39O43194 453 aa18.55■□□□□ 0.56
CBX1-202ENST00000393408 CLDN11O75508 207 aa18.55■□□□□ 0.56
CBX1-202ENST00000393408 HPRP00739 348 aa18.55■□□□□ 0.56
CBX1-202ENST00000393408 RHOCP08134 193 aa18.55■□□□□ 0.56
CBX1-202ENST00000393408 EEF1B2P24534 225 aaKnown RBP18.55■□□□□ 0.56
CBX1-202ENST00000393408 SLC11A2P49281 568 aa18.55■□□□□ 0.56
CBX1-202ENST00000393408 TMBIM6P55061 237 aa18.55■□□□□ 0.56
CBX1-202ENST00000393408 HUNKP57058 714 aa18.55■□□□□ 0.56
CBX1-202ENST00000393408 BROXQ5VW32 411 aa18.55■□□□□ 0.56
CBX1-202ENST00000393408 CCSAPQ6IQ19 270 aaPredicted RBP18.55■□□□□ 0.56
CBX1-202ENST00000393408 RASAL3Q86YV0 1011 aa18.55■□□□□ 0.56
CBX1-202ENST00000393408 FAM86B1Q8N7N1 296 aa18.55■□□□□ 0.56
CBX1-202ENST00000393408 PAIP1Q9H074 479 aaKnown RBP18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms