RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 MGAT4DA6NG13 374 aa7.51□□□□□ -1.21
HMGB3P1-201ENST00000393368 IQCF5A8MTL0 148 aa7.51□□□□□ -1.21
HMGB3P1-201ENST00000393368 CFAP99D6REC4 459 aa7.51□□□□□ -1.21
HMGB3P1-201ENST00000393368 CES2O00748 559 aa7.51□□□□□ -1.21
HMGB3P1-201ENST00000393368 PLD2O14939 933 aa7.51□□□□□ -1.21
HMGB3P1-201ENST00000393368 DUX1O43812 170 aa7.51□□□□□ -1.21
HMGB3P1-201ENST00000393368 BANF1O75531 89 aa7.51□□□□□ -1.21
HMGB3P1-201ENST00000393368 TNFSF15O95150 251 aa7.51□□□□□ -1.21
HMGB3P1-201ENST00000393368 RALBP11234 206 aa7.51□□□□□ -1.21
HMGB3P1-201ENST00000393368 CCL4P13236 92 aa7.51□□□□□ -1.21
HMGB3P1-201ENST00000393368 SLC2A4P14672 509 aa7.51□□□□□ -1.21
HMGB3P1-201ENST00000393368 XRCC1P18887 633 aaPredicted RBP7.51□□□□□ -1.21
HMGB3P1-201ENST00000393368 PSMA3P25788 255 aa7.51□□□□□ -1.21
HMGB3P1-201ENST00000393368 ITPKBP27987 946 aa7.51□□□□□ -1.21
HMGB3P1-201ENST00000393368 PDHA2P29803 388 aa7.51□□□□□ -1.21
HMGB3P1-201ENST00000393368 CCKBRP32239 447 aa7.51□□□□□ -1.21
HMGB3P1-201ENST00000393368 HALP42357 657 aa7.51□□□□□ -1.21
HMGB3P1-201ENST00000393368 PTGIRP43119 386 aa7.51□□□□□ -1.21
HMGB3P1-201ENST00000393368 GPR3P46089 330 aa7.51□□□□□ -1.21
HMGB3P1-201ENST00000393368 LSSP48449 732 aa7.51□□□□□ -1.21
HMGB3P1-201ENST00000393368 FNTAP49354 379 aa7.51□□□□□ -1.21
HMGB3P1-201ENST00000393368 PRLHRP49683 370 aa7.51□□□□□ -1.21
HMGB3P1-201ENST00000393368 MAPK10P53779 464 aa7.51□□□□□ -1.21
HMGB3P1-201ENST00000393368 CSE1LP55060 971 aaKnown RBP7.51□□□□□ -1.21
HMGB3P1-201ENST00000393368 GFERP55789 205 aa7.51□□□□□ -1.21
HMGB3P1-201ENST00000393368 PPP1CAP62136 330 aa7.51□□□□□ -1.21
HMGB3P1-201ENST00000393368 PRAMEP78395 509 aa7.51□□□□□ -1.21
HMGB3P1-201ENST00000393368 ACVR1Q04771 509 aa7.51□□□□□ -1.21
HMGB3P1-201ENST00000393368 BRD3Q15059 726 aa7.51□□□□□ -1.21
HMGB3P1-201ENST00000393368 PPP1R7Q15435 360 aa7.51□□□□□ -1.21
HMGB3P1-201ENST00000393368 RPE65Q16518 533 aa7.51□□□□□ -1.21
HMGB3P1-201ENST00000393368 TBC1D25Q3MII6 688 aa7.51□□□□□ -1.21
HMGB3P1-201ENST00000393368 PCID2Q5JVF3 399 aa7.51□□□□□ -1.21
HMGB3P1-201ENST00000393368 AGAP9Q5VTM2 703 aa7.51□□□□□ -1.21
HMGB3P1-201ENST00000393368 PAPD7Q5XG87 772 aaKnown RBP7.51□□□□□ -1.21
HMGB3P1-201ENST00000393368 METRNLQ641Q3 311 aa7.51□□□□□ -1.21
HMGB3P1-201ENST00000393368 LRRC8BQ6P9F7 803 aa7.51□□□□□ -1.21
HMGB3P1-201ENST00000393368 AFTPHQ6ULP2 937 aa7.51□□□□□ -1.21
HMGB3P1-201ENST00000393368 ABRAXAS1Q6UWZ7 409 aa7.51□□□□□ -1.21
HMGB3P1-201ENST00000393368 C4orf22Q6V702 233 aa7.51□□□□□ -1.21
HMGB3P1-201ENST00000393368 RAB11FIP2Q7L804 512 aa7.51□□□□□ -1.21
HMGB3P1-201ENST00000393368 PIM3Q86V86 326 aa7.51□□□□□ -1.21
HMGB3P1-201ENST00000393368 JAMLQ86YT9 394 aa7.51□□□□□ -1.21
HMGB3P1-201ENST00000393368 SPNS2Q8IVW8 549 aa7.51□□□□□ -1.21
HMGB3P1-201ENST00000393368 AGGF1Q8N302 714 aaeCLIP7.51□□□□□ -1.21
HMGB3P1-201ENST00000393368 FBXO39Q8N4B4 442 aa7.51□□□□□ -1.21
HMGB3P1-201ENST00000393368 OR2L2Q8NH16 312 aa7.51□□□□□ -1.21
HMGB3P1-201ENST00000393368 OR4L1Q8NH43 312 aa7.51□□□□□ -1.21
HMGB3P1-201ENST00000393368 OR10G6Q8NH81 332 aa7.51□□□□□ -1.21
HMGB3P1-201ENST00000393368 WDR36Q8NI36 951 aaKnown RBP7.51□□□□□ -1.21
HMGB3P1-201ENST00000393368 LKAAEAR1Q8TD35 194 aa7.51□□□□□ -1.21
HMGB3P1-201ENST00000393368 HNRNPLLQ8WVV9 542 aaKnown RBP7.51□□□□□ -1.21
HMGB3P1-201ENST00000393368 RSC1A1Q92681 617 aa7.51□□□□□ -1.21
HMGB3P1-201ENST00000393368 C12orf66Q96MD2 445 aa7.51□□□□□ -1.21
HMGB3P1-201ENST00000393368 PWWP2AQ96N64 755 aa7.51□□□□□ -1.21
HMGB3P1-201ENST00000393368 TMEM74Q96NL1 305 aa7.51□□□□□ -1.21
HMGB3P1-201ENST00000393368 SERPINB12Q96P63 405 aa7.51□□□□□ -1.21
HMGB3P1-201ENST00000393368 TRIM51Q9BSJ1 452 aa7.51□□□□□ -1.21
HMGB3P1-201ENST00000393368 STRADBQ9C0K7 418 aa7.51□□□□□ -1.21
HMGB3P1-201ENST00000393368 STN1Q9H668 368 aaKnown RBP7.51□□□□□ -1.21
HMGB3P1-201ENST00000393368 COG4Q9H9E3 785 aa7.51□□□□□ -1.21
HMGB3P1-201ENST00000393368 TREX1Q9NSU2 369 aa7.51□□□□□ -1.21
HMGB3P1-201ENST00000393368 WDR70Q9NW82 654 aa7.51□□□□□ -1.21
HMGB3P1-201ENST00000393368 SAR1BQ9Y6B6 198 aa7.51□□□□□ -1.21
HMGB3P1-201ENST00000393368 ITPR1Q14643 2758 aa7.51□□□□□ -1.21
HMGB3P1-201ENST00000393368 EPG5Q9HCE0 2579 aa7.51□□□□□ -1.21
HMGB3P1-201ENST00000393368 OR5K4A6NMS3 321 aa7.5□□□□□ -1.21
HMGB3P1-201ENST00000393368 UBXN7O94888 489 aa7.5□□□□□ -1.21
HMGB3P1-201ENST00000393368 VAPBO95292 243 aa7.5□□□□□ -1.21
HMGB3P1-201ENST00000393368 SLC35G4P0C7Q5 338 aa7.5□□□□□ -1.21
HMGB3P1-201ENST00000393368 JMJD7P0C870 316 aa7.5□□□□□ -1.21
HMGB3P1-201ENST00000393368 THRAP10827 490 aa7.5□□□□□ -1.21
HMGB3P1-201ENST00000393368 MTHFD1P11586 935 aaKnown RBP7.5□□□□□ -1.21
HMGB3P1-201ENST00000393368 ARNTP27540 789 aa7.5□□□□□ -1.21
HMGB3P1-201ENST00000393368 RBMS1P29558 406 aaKnown RBP7.5□□□□□ -1.21
HMGB3P1-201ENST00000393368 EIF2S3P41091 472 aaKnown RBP7.5□□□□□ -1.21
HMGB3P1-201ENST00000393368 MAGEA6P43360 314 aa7.5□□□□□ -1.21
HMGB3P1-201ENST00000393368 LEPRP48357 1165 aaKnown RBP7.5□□□□□ -1.21
HMGB3P1-201ENST00000393368 ARCN1P48444 511 aaKnown RBP7.5□□□□□ -1.21
HMGB3P1-201ENST00000393368 NPY2RP49146 381 aa7.5□□□□□ -1.21
HMGB3P1-201ENST00000393368 LIMK2P53671 638 aa7.5□□□□□ -1.21
HMGB3P1-201ENST00000393368 GPLD1P80108 840 aa7.5□□□□□ -1.21
HMGB3P1-201ENST00000393368 BOP1Q14137 746 aaKnown RBP7.5□□□□□ -1.21
HMGB3P1-201ENST00000393368 PLCL1Q15111 1095 aa7.5□□□□□ -1.21
HMGB3P1-201ENST00000393368 ZNF658BQ4V348 819 aaPredicted RBP7.5□□□□□ -1.21
HMGB3P1-201ENST00000393368 FASTKD1Q53R41 847 aaKnown RBP7.5□□□□□ -1.21
HMGB3P1-201ENST00000393368 CASC4Q6P4E1 433 aa7.5□□□□□ -1.21
HMGB3P1-201ENST00000393368 TMEM71Q6P5X7 295 aa7.5□□□□□ -1.21
HMGB3P1-201ENST00000393368 WASH2PQ6VEQ5 465 aa7.5□□□□□ -1.21
HMGB3P1-201ENST00000393368 SYT10Q6XYQ8 523 aa7.5□□□□□ -1.21
HMGB3P1-201ENST00000393368 TMEM26Q6ZUK4 368 aa7.5□□□□□ -1.21
HMGB3P1-201ENST00000393368 KRT222Q8N1A0 295 aa7.5□□□□□ -1.21
HMGB3P1-201ENST00000393368 OTUD6BQ8N6M0 293 aa7.5□□□□□ -1.21
HMGB3P1-201ENST00000393368 NAT8LQ8N9F0 302 aa7.5□□□□□ -1.21
HMGB3P1-201ENST00000393368 HM13Q8TCT9 377 aa7.5□□□□□ -1.21
HMGB3P1-201ENST00000393368 GRK7Q8WTQ7 553 aa7.5□□□□□ -1.21
HMGB3P1-201ENST00000393368 FGF11Q92914 225 aa7.5□□□□□ -1.21
HMGB3P1-201ENST00000393368 FAM136AQ96C01 138 aa7.5□□□□□ -1.21
HMGB3P1-201ENST00000393368 LIN37Q96GY3 246 aaPredicted RBP7.5□□□□□ -1.21
HMGB3P1-201ENST00000393368 ZNF514Q96K75 400 aaPredicted RBP7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms