RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 METAP1P53582 386 aa3.51□□□□□ -1.85
XRN1-202ENST00000392981 CYP4A11Q02928 519 aa3.51□□□□□ -1.85
XRN1-202ENST00000392981 IL18Q14116 193 aa3.51□□□□□ -1.85
XRN1-202ENST00000392981 DUOXA1Q1HG43 343 aa3.51□□□□□ -1.85
XRN1-202ENST00000392981 CFAP221Q4G0U5 840 aa3.51□□□□□ -1.85
XRN1-202ENST00000392981 FAM46CQ5VWP2 391 aa3.51□□□□□ -1.85
XRN1-202ENST00000392981 AAGABQ6PD74 315 aa3.51□□□□□ -1.85
XRN1-202ENST00000392981 ADGRA1Q86SQ6 560 aa3.51□□□□□ -1.85
XRN1-202ENST00000392981 SPERTQ8NA61 448 aa3.51□□□□□ -1.85
XRN1-202ENST00000392981 AGBL3Q8NEM8 1001 aa3.51□□□□□ -1.85
XRN1-202ENST00000392981 ZNF596Q8TC21 504 aa3.51□□□□□ -1.85
XRN1-202ENST00000392981 DNAJA4Q8WW22 397 aaPredicted RBP3.51□□□□□ -1.85
XRN1-202ENST00000392981 LPIN2Q92539 896 aa3.51□□□□□ -1.85
XRN1-202ENST00000392981 BCL2L2Q92843 193 aaPredicted RBP3.51□□□□□ -1.85
XRN1-202ENST00000392981 SPDL1Q96EA4 605 aa3.51□□□□□ -1.85
XRN1-202ENST00000392981 BTBD6Q96KE9 485 aa3.51□□□□□ -1.85
XRN1-202ENST00000392981 CNPY3Q9BT09 278 aa3.51□□□□□ -1.85
XRN1-202ENST00000392981 NDC1Q9BTX1 674 aa3.51□□□□□ -1.85
XRN1-202ENST00000392981 DPH1Q9BZG8 443 aa3.51□□□□□ -1.85
XRN1-202ENST00000392981 SLC39A8Q9C0K1 460 aa3.51□□□□□ -1.85
XRN1-202ENST00000392981 MMP27Q9H306 513 aa3.51□□□□□ -1.85
XRN1-202ENST00000392981 TESQ9UGI8 421 aaKnown RBP3.51□□□□□ -1.85
XRN1-202ENST00000392981 BTBD3Q9Y2F9 522 aa3.51□□□□□ -1.85
XRN1-202ENST00000392981 ZNF281Q9Y2X9 895 aa3.51□□□□□ -1.85
XRN1-202ENST00000392981 LSM4Q9Y4Z0 139 aaKnown RBP3.51□□□□□ -1.85
XRN1-202ENST00000392981 VCANP13611 3396 aa3.51□□□□□ -1.85
XRN1-202ENST00000392981 KDM5BQ9UGL1 1544 aa3.51□□□□□ -1.85
XRN1-202ENST00000392981 KDM3AQ9Y4C1 1321 aa3.51□□□□□ -1.85
XRN1-202ENST00000392981 TCRBV21S2A2A0A5A6 115 aa3.51□□□□□ -1.85
XRN1-202ENST00000392981 KDM4EB2RXH2 506 aaPredicted RBP3.51□□□□□ -1.85
XRN1-202ENST00000392981 L7N2F9 121 aa3.51□□□□□ -1.85
XRN1-202ENST00000392981 KIF2AO00139 706 aaPredicted RBP3.51□□□□□ -1.85
XRN1-202ENST00000392981 PJA2O43164 708 aa3.51□□□□□ -1.85
XRN1-202ENST00000392981 FGF4P08620 206 aa3.51□□□□□ -1.85
XRN1-202ENST00000392981 KCNA3P22001 575 aa3.51□□□□□ -1.85
XRN1-202ENST00000392981 CCND2P30279 289 aa3.51□□□□□ -1.85
XRN1-202ENST00000392981 CHI3L1P36222 383 aaPredicted RBP3.51□□□□□ -1.85
XRN1-202ENST00000392981 SP2Q02086 613 aa3.51□□□□□ -1.85
XRN1-202ENST00000392981 GPR176Q14439 515 aa3.51□□□□□ -1.85
XRN1-202ENST00000392981 CNGA3Q16281 694 aa3.51□□□□□ -1.85
XRN1-202ENST00000392981 SSX2Q16385 188 aa3.51□□□□□ -1.85
XRN1-202ENST00000392981 PNLIPRP3Q17RR3 467 aa3.51□□□□□ -1.85
XRN1-202ENST00000392981 GPAT3Q53EU6 434 aa3.51□□□□□ -1.85
XRN1-202ENST00000392981 CAPRIN2Q6IMN6 1127 aaKnown RBP3.51□□□□□ -1.85
XRN1-202ENST00000392981 OGFOD3Q6PK18 319 aa3.51□□□□□ -1.85
XRN1-202ENST00000392981 CES3Q6UWW8 571 aa3.51□□□□□ -1.85
XRN1-202ENST00000392981 LDB1Q86U70 411 aaPredicted RBP3.51□□□□□ -1.85
XRN1-202ENST00000392981 RTN4RL2Q86UN3 420 aa3.51□□□□□ -1.85
XRN1-202ENST00000392981 AMER2Q8N7J2 671 aa3.51□□□□□ -1.85
XRN1-202ENST00000392981 RNF166Q96A37 237 aaPredicted RBP3.51□□□□□ -1.85
XRN1-202ENST00000392981 AZIN2Q96A70 460 aa3.51□□□□□ -1.85
XRN1-202ENST00000392981 RSPRY1Q96DX4 576 aa3.51□□□□□ -1.85
XRN1-202ENST00000392981 API5Q9BZZ5 524 aaKnown RBP3.51□□□□□ -1.85
XRN1-202ENST00000392981 GDAP2Q9NXN4 497 aa3.51□□□□□ -1.85
XRN1-202ENST00000392981 CBY1Q9Y3M2 126 aa3.51□□□□□ -1.85
XRN1-202ENST00000392981 NR2E1Q9Y466 385 aa3.51□□□□□ -1.85
XRN1-202ENST00000392981 MAD1L1Q9Y6D9 718 aa3.51□□□□□ -1.85
XRN1-202ENST00000392981 PRXQ9BXM0 1461 aa3.5□□□□□ -1.85
XRN1-202ENST00000392981 ELOVL7A1L3X0 281 aa3.5□□□□□ -1.85
XRN1-202ENST00000392981 MAGEB16A2A368 324 aa3.5□□□□□ -1.85
XRN1-202ENST00000392981 ZSCAN5BA6NJL1 495 aa3.5□□□□□ -1.85
XRN1-202ENST00000392981 H0YIV9 168 aa3.5□□□□□ -1.85
XRN1-202ENST00000392981 CTIFO43310 598 aaKnown RBP3.5□□□□□ -1.85
XRN1-202ENST00000392981 SPOPO43791 374 aa3.5□□□□□ -1.85
XRN1-202ENST00000392981 CIDEAO60543 219 aa3.5□□□□□ -1.85
XRN1-202ENST00000392981 OR2C1O95371 312 aa3.5□□□□□ -1.85
XRN1-202ENST00000392981 S100A6P06703 90 aa3.5□□□□□ -1.85
XRN1-202ENST00000392981 FCGR2AP12318 317 aa3.5□□□□□ -1.85
XRN1-202ENST00000392981 CSTF2P33240 577 aaKnown RBP eCLIP3.5□□□□□ -1.85
XRN1-202ENST00000392981 MC3RP41968 323 aa3.5□□□□□ -1.85
XRN1-202ENST00000392981 ENTPD1P49961 510 aa3.5□□□□□ -1.85
XRN1-202ENST00000392981 RWDD2BP57060 319 aa3.5□□□□□ -1.85
XRN1-202ENST00000392981 EMC4Q5J8M3 183 aa3.5□□□□□ -1.85
XRN1-202ENST00000392981 GCNT6Q5T4J0 391 aa3.5□□□□□ -1.85
XRN1-202ENST00000392981 METTL11BQ5VVY1 283 aa3.5□□□□□ -1.85
XRN1-202ENST00000392981 PRAMEF7Q5VXH5 474 aa3.5□□□□□ -1.85
XRN1-202ENST00000392981 PDPK2PQ6A1A2 396 aa3.5□□□□□ -1.85
XRN1-202ENST00000392981 ARHGAP22Q7Z5H3 698 aa3.5□□□□□ -1.85
XRN1-202ENST00000392981 VASH2Q86V25 355 aa3.5□□□□□ -1.85
XRN1-202ENST00000392981 KLBQ86Z14 1044 aa3.5□□□□□ -1.85
XRN1-202ENST00000392981 TIGD4Q8IY51 512 aa3.5□□□□□ -1.85
XRN1-202ENST00000392981 DTWD1Q8N5C7 304 aa3.5□□□□□ -1.85
XRN1-202ENST00000392981 ZNF611Q8N823 705 aa3.5□□□□□ -1.85
XRN1-202ENST00000392981 DBF4BQ8NFT6 615 aa3.5□□□□□ -1.85
XRN1-202ENST00000392981 PRR11Q96HE9 360 aaPredicted RBP3.5□□□□□ -1.85
XRN1-202ENST00000392981 OXNAD1Q96HP4 312 aaPredicted RBP3.5□□□□□ -1.85
XRN1-202ENST00000392981 GPR78Q96P69 363 aa3.5□□□□□ -1.85
XRN1-202ENST00000392981 SLX1AQ9BQ83 275 aa3.5□□□□□ -1.85
XRN1-202ENST00000392981 OLAHQ9NV23 265 aa3.5□□□□□ -1.85
XRN1-202ENST00000392981 IFNKQ9P0W0 207 aa3.5□□□□□ -1.85
XRN1-202ENST00000392981 UPB1Q9UBR1 384 aa3.5□□□□□ -1.85
XRN1-202ENST00000392981 EXOGQ9Y2C4 368 aaKnown RBP3.5□□□□□ -1.85
XRN1-202ENST00000392981 U3KQV3 271 aa3.5□□□□□ -1.85
XRN1-202ENST00000392981 ASTN2O75129 1339 aaPredicted RBP3.5□□□□□ -1.85
XRN1-202ENST00000392981 EIF4E1BA6NMX2 242 aaKnown RBP3.5□□□□□ -1.85
XRN1-202ENST00000392981 KCNQ3O43525 872 aa3.5□□□□□ -1.85
XRN1-202ENST00000392981 RGS11O94810 467 aa3.5□□□□□ -1.85
XRN1-202ENST00000392981 CSF2P04141 144 aa3.5□□□□□ -1.85
XRN1-202ENST00000392981 SP9P0CG40 484 aa3.5□□□□□ -1.85
XRN1-202ENST00000392981 TACR2P21452 398 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms