RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 SMAD6O43541 496 aaKnown RBP18.77■□□□□ 0.59
CCDC50-202ENST00000392456 CAPNS1P04632 268 aa18.77■□□□□ 0.59
CCDC50-202ENST00000392456 INHBAP08476 426 aa18.77■□□□□ 0.59
CCDC50-202ENST00000392456 VIPR2P41587 438 aa18.77■□□□□ 0.59
CCDC50-202ENST00000392456 ARHGAP8P85298 464 aa18.77■□□□□ 0.59
CCDC50-202ENST00000392456 GALK2Q01415 458 aa18.77■□□□□ 0.59
CCDC50-202ENST00000392456 ZBTB46Q86UZ6 589 aa18.77■□□□□ 0.59
CCDC50-202ENST00000392456 RMND5BQ96G75 393 aaPredicted RBP18.77■□□□□ 0.59
CCDC50-202ENST00000392456 SERAC1Q96JX3 654 aa18.77■□□□□ 0.59
CCDC50-202ENST00000392456 C1orf50Q9BV19 199 aa18.77■□□□□ 0.59
CCDC50-202ENST00000392456 SLC17A7Q9P2U7 560 aa18.77■□□□□ 0.59
CCDC50-202ENST00000392456 POLHQ9Y253 713 aa18.77■□□□□ 0.59
CCDC50-202ENST00000392456 MYLKQ15746 1914 aa18.76■□□□□ 0.59
CCDC50-202ENST00000392456 ZNF839A8K0R7 811 aa18.76■□□□□ 0.59
CCDC50-202ENST00000392456 ATXN1LP0C7T5 689 aaKnown RBP18.76■□□□□ 0.59
CCDC50-202ENST00000392456 CR2P20023 1033 aa18.76■□□□□ 0.59
CCDC50-202ENST00000392456 HLA-FP30511 346 aa18.76■□□□□ 0.59
CCDC50-202ENST00000392456 IDUAP35475 653 aa18.76■□□□□ 0.59
CCDC50-202ENST00000392456 SIRPB2Q5JXA9 342 aa18.76■□□□□ 0.59
CCDC50-202ENST00000392456 ESRP1Q6NXG1 681 aaKnown RBP18.76■□□□□ 0.59
CCDC50-202ENST00000392456 ASCC1Q8N9N2 400 aaKnown RBP18.76■□□□□ 0.59
CCDC50-202ENST00000392456 BANPQ8N9N5 519 aa18.76■□□□□ 0.59
CCDC50-202ENST00000392456 MYLIPQ8WY64 445 aa18.76■□□□□ 0.59
CCDC50-202ENST00000392456 TTC17Q96AE7 1141 aa18.76■□□□□ 0.59
CCDC50-202ENST00000392456 NAT9Q9BTE0 207 aa18.76■□□□□ 0.59
CCDC50-202ENST00000392456 KIFC1Q9BW19 673 aa18.76■□□□□ 0.59
CCDC50-202ENST00000392456 CXorf21Q9HAI6 301 aa18.76■□□□□ 0.59
CCDC50-202ENST00000392456 C8orf4Q9NR00 106 aa18.76■□□□□ 0.59
CCDC50-202ENST00000392456 NEDD8-MDP1E9PL57 170 aa18.76■□□□□ 0.59
CCDC50-202ENST00000392456 ZW10O43264 779 aa18.76■□□□□ 0.59
CCDC50-202ENST00000392456 PIRTP0C851 137 aa18.76■□□□□ 0.59
CCDC50-202ENST00000392456 ECT2LQ008S8 904 aa18.76■□□□□ 0.59
CCDC50-202ENST00000392456 GALNT3Q14435 633 aa18.76■□□□□ 0.59
CCDC50-202ENST00000392456 ALG1LQ6GMV1 187 aa18.76■□□□□ 0.59
CCDC50-202ENST00000392456 ADGRG2Q8IZP9 1017 aa18.76■□□□□ 0.59
CCDC50-202ENST00000392456 LEMD2Q8NC56 503 aa18.76■□□□□ 0.59
CCDC50-202ENST00000392456 CERS2Q96G23 380 aa18.76■□□□□ 0.59
CCDC50-202ENST00000392456 OR2B2Q9GZK3 357 aa18.76■□□□□ 0.59
CCDC50-202ENST00000392456 SP140LQ9H930 580 aa18.76■□□□□ 0.59
CCDC50-202ENST00000392456 SCPEP1Q9HB40 452 aa18.76■□□□□ 0.59
CCDC50-202ENST00000392456 ARNT2Q9HBZ2 717 aa18.76■□□□□ 0.59
CCDC50-202ENST00000392456 HELZP42694 1942 aaKnown RBP18.76■□□□□ 0.59
CCDC50-202ENST00000392456 BRWD1Q9NSI6 2320 aa18.76■□□□□ 0.59
CCDC50-202ENST00000392456 C2orf16Q68DN1 1984 aa18.75■□□□□ 0.59
CCDC50-202ENST00000392456 LOC285095A0A1B0GVY8 99 aa18.75■□□□□ 0.59
CCDC50-202ENST00000392456 CTSOP43234 321 aaPredicted RBP18.75■□□□□ 0.59
CCDC50-202ENST00000392456 MPP7Q5T2T1 576 aa18.75■□□□□ 0.59
CCDC50-202ENST00000392456 CYS1Q717R9 158 aa18.75■□□□□ 0.59
CCDC50-202ENST00000392456 CARM1Q86X55 608 aa18.75■□□□□ 0.59
CCDC50-202ENST00000392456 PNPLA1Q8N8W4 532 aa18.75■□□□□ 0.59
CCDC50-202ENST00000392456 FIBINQ8TAL6 211 aa18.75■□□□□ 0.59
CCDC50-202ENST00000392456 LMLNQ96KR4 655 aa18.75■□□□□ 0.59
CCDC50-202ENST00000392456 RPL10LQ96L21 214 aaKnown RBP18.75■□□□□ 0.59
CCDC50-202ENST00000392456 ZNF347Q96SE7 839 aa18.75■□□□□ 0.59
CCDC50-202ENST00000392456 PNPLA3Q9NST1 481 aa18.75■□□□□ 0.59
CCDC50-202ENST00000392456 ABCB8Q9NUT2 735 aa18.75■□□□□ 0.59
CCDC50-202ENST00000392456 SLC8A2Q9UPR5 921 aa18.75■□□□□ 0.59
CCDC50-202ENST00000392456 PCDHGC4Q9Y5F7 938 aa18.75■□□□□ 0.59
CCDC50-202ENST00000392456 GNA13Q14344 377 aa18.75■□□□□ 0.59
CCDC50-202ENST00000392456 PTPRRQ15256 657 aa18.75■□□□□ 0.59
CCDC50-202ENST00000392456 RAB30Q15771 203 aa18.75■□□□□ 0.59
CCDC50-202ENST00000392456 PCID2Q5JVF3 399 aa18.75■□□□□ 0.59
CCDC50-202ENST00000392456 SPANXN3Q5MJ09 141 aa18.75■□□□□ 0.59
CCDC50-202ENST00000392456 LY6G5CQ5SRR4 150 aa18.75■□□□□ 0.59
CCDC50-202ENST00000392456 ATXN7L2Q5T6C5 722 aaPredicted RBP18.75■□□□□ 0.59
CCDC50-202ENST00000392456 MROH9Q5TGP6 573 aa18.75■□□□□ 0.59
CCDC50-202ENST00000392456 PKN3Q6P5Z2 889 aa18.75■□□□□ 0.59
CCDC50-202ENST00000392456 ZNF783Q6ZMS7 281 aa18.75■□□□□ 0.59
CCDC50-202ENST00000392456 KCTD20Q7Z5Y7 419 aa18.75■□□□□ 0.59
CCDC50-202ENST00000392456 BTLAQ7Z6A9 289 aa18.75■□□□□ 0.59
CCDC50-202ENST00000392456 BEND7Q8N7W2 519 aaPredicted RBP18.75■□□□□ 0.59
CCDC50-202ENST00000392456 C7orf57Q8NEG2 295 aa18.75■□□□□ 0.59
CCDC50-202ENST00000392456 ALKBH8Q96BT7 664 aaKnown RBP18.75■□□□□ 0.59
CCDC50-202ENST00000392456 ZNF717Q9BY31 904 aaPredicted RBP18.75■□□□□ 0.59
CCDC50-202ENST00000392456 DPP7Q9UHL4 492 aa18.75■□□□□ 0.59
CCDC50-202ENST00000392456 PCM1Q15154 2024 aa18.74■□□□□ 0.59
CCDC50-202ENST00000392456 ZNF197O14709 1029 aa18.74■□□□□ 0.59
CCDC50-202ENST00000392456 AREL1O15033 823 aa18.74■□□□□ 0.59
CCDC50-202ENST00000392456 ARNTP27540 789 aa18.74■□□□□ 0.59
CCDC50-202ENST00000392456 ABCG1P45844 678 aa18.74■□□□□ 0.59
CCDC50-202ENST00000392456 NFATC3Q12968 1075 aa18.74■□□□□ 0.59
CCDC50-202ENST00000392456 BBS2Q9BXC9 721 aa18.74■□□□□ 0.59
CCDC50-202ENST00000392456 LHX3Q9UBR4 397 aa18.74■□□□□ 0.59
CCDC50-202ENST00000392456 KCTD3Q9Y597 815 aa18.74■□□□□ 0.59
CCDC50-202ENST00000392456 MIA3Q5JRA6 1907 aa18.74■□□□□ 0.59
CCDC50-202ENST00000392456 A0A087WXM4 84 aa18.74■□□□□ 0.59
CCDC50-202ENST00000392456 TRIM49D1C9J1S8 452 aa18.74■□□□□ 0.59
CCDC50-202ENST00000392456 CAPN1P07384 714 aa18.74■□□□□ 0.59
CCDC50-202ENST00000392456 SERPINF2P08697 491 aa18.74■□□□□ 0.59
CCDC50-202ENST00000392456 NELFEP18615 380 aaKnown RBP18.74■□□□□ 0.59
CCDC50-202ENST00000392456 AOC1P19801 751 aa18.74■□□□□ 0.59
CCDC50-202ENST00000392456 NUDT1P36639 197 aa18.74■□□□□ 0.59
CCDC50-202ENST00000392456 CBX5P45973 191 aa18.74■□□□□ 0.59
CCDC50-202ENST00000392456 FCHO2Q0JRZ9 810 aa18.74■□□□□ 0.59
CCDC50-202ENST00000392456 TRAF2Q12933 501 aa18.74■□□□□ 0.59
CCDC50-202ENST00000392456 PLEKHG6Q3KR16 790 aa18.74■□□□□ 0.59
CCDC50-202ENST00000392456 GPR107Q5VW38 600 aa18.74■□□□□ 0.59
CCDC50-202ENST00000392456 FAM205BPQ63HN1 556 aa18.74■□□□□ 0.59
CCDC50-202ENST00000392456 SH2D5Q6ZV89 423 aa18.74■□□□□ 0.59
CCDC50-202ENST00000392456 NAT16Q8N8M0 369 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms