RNA–Protein interactions for RNA: ENST00000391970.3

PTPRC-205, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-205ENST00000391970 VDAC3Q9Y277 283 aa3.02□□□□□ -1.93
PTPRC-205ENST00000391970 EDDM13A0A1B0GTR0 161 aa3.01□□□□□ -1.93
PTPRC-205ENST00000391970 ZCWPW2A0A1B0GU75 182 aa3.01□□□□□ -1.93
PTPRC-205ENST00000391970 C4orf47A7E2U8 309 aa3.01□□□□□ -1.93
PTPRC-205ENST00000391970 LACTBL1A8MY62 500 aa3.01□□□□□ -1.93
PTPRC-205ENST00000391970 ANKRD66B4E2M5 251 aa3.01□□□□□ -1.93
PTPRC-205ENST00000391970 EIF3DO15371 548 aaKnown RBP eCLIP3.01□□□□□ -1.93
PTPRC-205ENST00000391970 IPO8O15397 1037 aaKnown RBP3.01□□□□□ -1.93
PTPRC-205ENST00000391970 ZNHIT1O43257 154 aa3.01□□□□□ -1.93
PTPRC-205ENST00000391970 SLCO2B1O94956 709 aa3.01□□□□□ -1.93
PTPRC-205ENST00000391970 NTN1O95631 604 aa3.01□□□□□ -1.93
PTPRC-205ENST00000391970 HSPA4LO95757 839 aa3.01□□□□□ -1.93
PTPRC-205ENST00000391970 FYNP06241 537 aa3.01□□□□□ -1.93
PTPRC-205ENST00000391970 QDPRP09417 244 aa3.01□□□□□ -1.93
PTPRC-205ENST00000391970 CCDC175P0C221 793 aa3.01□□□□□ -1.93
PTPRC-205ENST00000391970 LINGO3P0C6S8 592 aa3.01□□□□□ -1.93
PTPRC-205ENST00000391970 DAOP14920 347 aa3.01□□□□□ -1.93
PTPRC-205ENST00000391970 PFKFB1P16118 471 aa3.01□□□□□ -1.93
PTPRC-205ENST00000391970 GABRA5P31644 462 aa3.01□□□□□ -1.93
PTPRC-205ENST00000391970 THBS3P49746 956 aa3.01□□□□□ -1.93
PTPRC-205ENST00000391970 DSCR9P59020 149 aa3.01□□□□□ -1.93
PTPRC-205ENST00000391970 NANOS2P60321 138 aaKnown RBP3.01□□□□□ -1.93
PTPRC-205ENST00000391970 CDK3Q00526 305 aa3.01□□□□□ -1.93
PTPRC-205ENST00000391970 POU5F1Q01860 360 aaKnown RBP3.01□□□□□ -1.93
PTPRC-205ENST00000391970 TROAPQ12815 778 aa3.01□□□□□ -1.93
PTPRC-205ENST00000391970 RALGDSQ12967 914 aa3.01□□□□□ -1.93
PTPRC-205ENST00000391970 GTF2H2Q13888 395 aa3.01□□□□□ -1.93
PTPRC-205ENST00000391970 COG2Q14746 738 aa3.01□□□□□ -1.93
PTPRC-205ENST00000391970 SF3B4Q15427 424 aaKnown RBP eCLIP3.01□□□□□ -1.93
PTPRC-205ENST00000391970 TMEM35AQ53FP2 167 aa3.01□□□□□ -1.93
PTPRC-205ENST00000391970 ARMC4Q5T2S8 1044 aa3.01□□□□□ -1.93
PTPRC-205ENST00000391970 C6orf163Q5TEZ5 329 aa3.01□□□□□ -1.93
PTPRC-205ENST00000391970 GTF2H2CQ6P1K8 395 aa3.01□□□□□ -1.93
PTPRC-205ENST00000391970 FIGLAQ6QHK4 219 aa3.01□□□□□ -1.93
PTPRC-205ENST00000391970 RAD9BQ6WBX8 426 aa3.01□□□□□ -1.93
PTPRC-205ENST00000391970 CENPVQ7Z7K6 275 aaPredicted RBP3.01□□□□□ -1.93
PTPRC-205ENST00000391970 IQCHQ86VS3 1027 aa3.01□□□□□ -1.93
PTPRC-205ENST00000391970 TMEM173Q86WV6 379 aaPredicted RBP3.01□□□□□ -1.93
PTPRC-205ENST00000391970 VSIG1Q86XK7 387 aa3.01□□□□□ -1.93
PTPRC-205ENST00000391970 KMT5CQ86Y97 462 aa3.01□□□□□ -1.93
PTPRC-205ENST00000391970 ZNF441Q8N8Z8 693 aa3.01□□□□□ -1.93
PTPRC-205ENST00000391970 Q8NFD4 153 aa3.01□□□□□ -1.93
PTPRC-205ENST00000391970 BBS10Q8TAM1 723 aa3.01□□□□□ -1.93
PTPRC-205ENST00000391970 PHF21AQ96BD5 680 aa3.01□□□□□ -1.93
PTPRC-205ENST00000391970 ZBTB9Q96C00 473 aa3.01□□□□□ -1.93
PTPRC-205ENST00000391970 NXNL1Q96CM4 212 aa3.01□□□□□ -1.93
PTPRC-205ENST00000391970 RTP4Q96DX8 246 aa3.01□□□□□ -1.93
PTPRC-205ENST00000391970 CDCA5Q96FF9 252 aa3.01□□□□□ -1.93
PTPRC-205ENST00000391970 FAM84BQ96KN1 310 aaPredicted RBP3.01□□□□□ -1.93
PTPRC-205ENST00000391970 PRMT6Q96LA8 375 aaPredicted RBP3.01□□□□□ -1.93
PTPRC-205ENST00000391970 ZNF582Q96NG8 517 aaPredicted RBP3.01□□□□□ -1.93
PTPRC-205ENST00000391970 C16orf70Q9BSU1 422 aa3.01□□□□□ -1.93
PTPRC-205ENST00000391970 TM6SF1Q9BZW5 370 aa3.01□□□□□ -1.93
PTPRC-205ENST00000391970 ST6GALNAC4Q9H4F1 302 aa3.01□□□□□ -1.93
PTPRC-205ENST00000391970 SLA2Q9H6Q3 261 aa3.01□□□□□ -1.93
PTPRC-205ENST00000391970 NOL11Q9H8H0 719 aaKnown RBP3.01□□□□□ -1.93
PTPRC-205ENST00000391970 CNOT10Q9H9A5 744 aaKnown RBP3.01□□□□□ -1.93
PTPRC-205ENST00000391970 UBTD1Q9HAC8 227 aa3.01□□□□□ -1.93
PTPRC-205ENST00000391970 EBF2Q9HAK2 575 aa3.01□□□□□ -1.93
PTPRC-205ENST00000391970 HHATLQ9HCP6 504 aa3.01□□□□□ -1.93
PTPRC-205ENST00000391970 EQTNQ9NQ60 294 aa3.01□□□□□ -1.93
PTPRC-205ENST00000391970 PIH1D3Q9NQM4 214 aaKnown RBP3.01□□□□□ -1.93
PTPRC-205ENST00000391970 SH3GLB2Q9NR46 395 aa3.01□□□□□ -1.93
PTPRC-205ENST00000391970 MBNL1Q9NR56 388 aaKnown RBP3.01□□□□□ -1.93
PTPRC-205ENST00000391970 PRMT7Q9NVM4 692 aaPredicted RBP3.01□□□□□ -1.93
PTPRC-205ENST00000391970 RHCGQ9UBD6 479 aa3.01□□□□□ -1.93
PTPRC-205ENST00000391970 DLGAP4Q9Y2H0 992 aa3.01□□□□□ -1.93
PTPRC-205ENST00000391970 TAF1P21675 1872 aa3.01□□□□□ -1.93
PTPRC-205ENST00000391970 CGNL1Q0VF96 1302 aa3□□□□□ -1.93
PTPRC-205ENST00000391970 A0A0B4J293 547 aa3□□□□□ -1.93
PTPRC-205ENST00000391970 PRSS51A0A1B0GVH4 220 aa3□□□□□ -1.93
PTPRC-205ENST00000391970 A0A1W2PPM1 405 aa3□□□□□ -1.93
PTPRC-205ENST00000391970 FEZF1A0PJY2 475 aa3□□□□□ -1.93
PTPRC-205ENST00000391970 MAGEA13PA6NCF6 341 aa3□□□□□ -1.93
PTPRC-205ENST00000391970 ANKUB1A6NFN9 424 aa3□□□□□ -1.93
PTPRC-205ENST00000391970 HNRNPCL2B2RXH8 293 aa3□□□□□ -1.93
PTPRC-205ENST00000391970 DVL1O14640 695 aa3□□□□□ -1.93
PTPRC-205ENST00000391970 WDR1O75083 606 aa3□□□□□ -1.93
PTPRC-205ENST00000391970 MED24O75448 989 aa3□□□□□ -1.93
PTPRC-205ENST00000391970 GCNT3O95395 438 aa3□□□□□ -1.93
PTPRC-205ENST00000391970 ZBTB11O95625 1053 aaPredicted RBP3□□□□□ -1.93
PTPRC-205ENST00000391970 PPP1R3DO95685 299 aa3□□□□□ -1.93
PTPRC-205ENST00000391970 GLULP15104 373 aa3□□□□□ -1.93
PTPRC-205ENST00000391970 GM2AP17900 193 aa3□□□□□ -1.93
PTPRC-205ENST00000391970 AMPHP49418 695 aa3□□□□□ -1.93
PTPRC-205ENST00000391970 RAB28P51157 221 aa3□□□□□ -1.93
PTPRC-205ENST00000391970 EEF1A1P68104 462 aaKnown RBP3□□□□□ -1.93
PTPRC-205ENST00000391970 ROR1Q01973 937 aa3□□□□□ -1.93
PTPRC-205ENST00000391970 ZBTB17Q13105 803 aa3□□□□□ -1.93
PTPRC-205ENST00000391970 CAMK2DQ13557 499 aa3□□□□□ -1.93
PTPRC-205ENST00000391970 GCNT6Q5T4J0 391 aa3□□□□□ -1.93
PTPRC-205ENST00000391970 RNASEH2BQ5TBB1 312 aaKnown RBP3□□□□□ -1.93
PTPRC-205ENST00000391970 EEF1A1P5Q5VTE0 462 aa3□□□□□ -1.93
PTPRC-205ENST00000391970 OR7E24Q6IFN5 339 aa3□□□□□ -1.93
PTPRC-205ENST00000391970 IL27RAQ6UWB1 636 aa3□□□□□ -1.93
PTPRC-205ENST00000391970 PLEKHM3Q6ZWE6 761 aa3□□□□□ -1.93
PTPRC-205ENST00000391970 SFR1Q86XK3 245 aa3□□□□□ -1.93
PTPRC-205ENST00000391970 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3□□□□□ -1.93
PTPRC-205ENST00000391970 GBGT1Q8N5D6 347 aa3□□□□□ -1.93
PTPRC-205ENST00000391970 PI4KAP1Q8N8J0 262 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms