RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 OLIG1Q8TAK6 271 aa2.96□□□□□ -1.94
TRAV40-201ENST00000390467 GMPPAQ96IJ6 420 aaPredicted RBP2.96□□□□□ -1.94
TRAV40-201ENST00000390467 ZNF582Q96NG8 517 aaPredicted RBP2.96□□□□□ -1.94
TRAV40-201ENST00000390467 VGLL1Q99990 258 aa2.96□□□□□ -1.94
TRAV40-201ENST00000390467 RTP3Q9BQQ7 232 aa2.96□□□□□ -1.94
TRAV40-201ENST00000390467 SLA2Q9H6Q3 261 aa2.96□□□□□ -1.94
TRAV40-201ENST00000390467 JMJD4Q9H9V9 463 aa2.96□□□□□ -1.94
TRAV40-201ENST00000390467 MIOSQ9NXC5 875 aa2.96□□□□□ -1.94
TRAV40-201ENST00000390467 TRMT1Q9NXH9 659 aaKnown RBP2.96□□□□□ -1.94
TRAV40-201ENST00000390467 ASIC3Q9UHC3 531 aa2.96□□□□□ -1.94
TRAV40-201ENST00000390467 OR6C76A6NM76 312 aa2.95□□□□□ -1.94
TRAV40-201ENST00000390467 H7C423 109 aa2.95□□□□□ -1.94
TRAV40-201ENST00000390467 EML2O95834 649 aa2.95□□□□□ -1.94
TRAV40-201ENST00000390467 ACP2P11117 423 aa2.95□□□□□ -1.94
TRAV40-201ENST00000390467 BMXP51813 675 aa2.95□□□□□ -1.94
TRAV40-201ENST00000390467 MRPS5P82675 430 aaKnown RBP2.95□□□□□ -1.94
TRAV40-201ENST00000390467 GOLGA8DPQ0D2H9 430 aa2.95□□□□□ -1.94
TRAV40-201ENST00000390467 LRMPQ12912 555 aa2.95□□□□□ -1.94
TRAV40-201ENST00000390467 P2RY6Q15077 328 aa2.95□□□□□ -1.94
TRAV40-201ENST00000390467 ALS2CLQ60I27 953 aa2.95□□□□□ -1.94
TRAV40-201ENST00000390467 ACSM2BQ68CK6 577 aa2.95□□□□□ -1.94
TRAV40-201ENST00000390467 CFAP77Q6ZQR2 320 aa2.95□□□□□ -1.94
TRAV40-201ENST00000390467 TPRG1Q6ZUI0 275 aa2.95□□□□□ -1.94
TRAV40-201ENST00000390467 L3MBTL4Q8NA19 623 aa2.95□□□□□ -1.94
TRAV40-201ENST00000390467 ZNF383Q8NA42 475 aa2.95□□□□□ -1.94
TRAV40-201ENST00000390467 PPHLN1Q8NEY8 458 aaKnown RBP2.95□□□□□ -1.94
TRAV40-201ENST00000390467 MOCOSQ96EN8 888 aa2.95□□□□□ -1.94
TRAV40-201ENST00000390467 C18orf12Q96KH6 178 aa2.95□□□□□ -1.94
TRAV40-201ENST00000390467 GAD1Q99259 594 aa2.95□□□□□ -1.94
TRAV40-201ENST00000390467 CABLES2Q9BTV7 478 aa2.95□□□□□ -1.94
TRAV40-201ENST00000390467 HGH1Q9BTY7 390 aa2.95□□□□□ -1.94
TRAV40-201ENST00000390467 PLCXD1Q9NUJ7 323 aa2.95□□□□□ -1.94
TRAV40-201ENST00000390467 COQ3Q9NZJ6 369 aa2.95□□□□□ -1.94
TRAV40-201ENST00000390467 DBNLQ9UJU6 430 aaKnown RBP2.95□□□□□ -1.94
TRAV40-201ENST00000390467 RABGAP1Q9Y3P9 1069 aa2.95□□□□□ -1.94
TRAV40-201ENST00000390467 PIAS3Q9Y6X2 628 aa2.95□□□□□ -1.94
TRAV40-201ENST00000390467 RTN3O95197 1032 aaPredicted RBP2.94□□□□□ -1.94
TRAV40-201ENST00000390467 EIF2S1P05198 315 aaKnown RBP2.94□□□□□ -1.94
TRAV40-201ENST00000390467 CEACAM8P31997 349 aaPredicted RBP2.94□□□□□ -1.94
TRAV40-201ENST00000390467 KRT9P35527 623 aa2.94□□□□□ -1.94
TRAV40-201ENST00000390467 NKX2-1P43699 371 aaPredicted RBP2.94□□□□□ -1.94
TRAV40-201ENST00000390467 CDH11P55287 796 aa2.94□□□□□ -1.94
TRAV40-201ENST00000390467 TFAP4Q01664 338 aa2.94□□□□□ -1.94
TRAV40-201ENST00000390467 SP3Q02447 781 aa2.94□□□□□ -1.94
TRAV40-201ENST00000390467 PPARDQ03181 441 aa2.94□□□□□ -1.94
TRAV40-201ENST00000390467 EIF4A2Q14240 407 aaKnown RBP2.94□□□□□ -1.94
TRAV40-201ENST00000390467 ASTE1Q2TB18 679 aaPredicted RBP2.94□□□□□ -1.94
TRAV40-201ENST00000390467 PCGF3Q3KNV8 242 aa2.94□□□□□ -1.94
TRAV40-201ENST00000390467 GKAP1Q5VSY0 366 aaPredicted RBP2.94□□□□□ -1.94
TRAV40-201ENST00000390467 ZDHHC20Q5W0Z9 365 aa2.94□□□□□ -1.94
TRAV40-201ENST00000390467 NCEH1Q6PIU2 408 aa2.94□□□□□ -1.94
TRAV40-201ENST00000390467 SUSD1Q6UWL2 747 aa2.94□□□□□ -1.94
TRAV40-201ENST00000390467 Q6ZSR9 355 aa2.94□□□□□ -1.94
TRAV40-201ENST00000390467 SLC16A9Q7RTY1 509 aa2.94□□□□□ -1.94
TRAV40-201ENST00000390467 TMEM143Q96AN5 459 aa2.94□□□□□ -1.94
TRAV40-201ENST00000390467 SLC22A12Q96S37 553 aa2.94□□□□□ -1.94
TRAV40-201ENST00000390467 SYT11Q9BT88 431 aa2.94□□□□□ -1.94
TRAV40-201ENST00000390467 MCRIP2Q9BUT9 160 aaKnown RBP2.94□□□□□ -1.94
TRAV40-201ENST00000390467 C9orf78Q9NZ63 289 aaPredicted RBP2.94□□□□□ -1.94
TRAV40-201ENST00000390467 IGHV4-4A0A075B6R2 117 aa2.93□□□□□ -1.94
TRAV40-201ENST00000390467 IGHV4-61A0A0C4DH41 118 aa2.93□□□□□ -1.94
TRAV40-201ENST00000390467 LIPT2A6NK58 231 aa2.93□□□□□ -1.94
TRAV40-201ENST00000390467 DNM1LO00429 736 aa2.93□□□□□ -1.94
TRAV40-201ENST00000390467 IGHV4-59P01825 116 aa2.93□□□□□ -1.94
TRAV40-201ENST00000390467 HIST1H2ABP04908 130 aa2.93□□□□□ -1.94
TRAV40-201ENST00000390467 HMBSP08397 361 aa2.93□□□□□ -1.94
TRAV40-201ENST00000390467 HIST1H2ADP20671 130 aa2.93□□□□□ -1.94
TRAV40-201ENST00000390467 KLC3Q6P597 504 aa2.93□□□□□ -1.94
TRAV40-201ENST00000390467 HIST3H2AQ7L7L0 130 aa2.93□□□□□ -1.94
TRAV40-201ENST00000390467 FASTKD5Q7L8L6 764 aaKnown RBP2.93□□□□□ -1.94
TRAV40-201ENST00000390467 CPLX4Q7Z7G2 160 aa2.93□□□□□ -1.94
TRAV40-201ENST00000390467 GPALPP1Q8IXQ4 340 aa2.93□□□□□ -1.94
TRAV40-201ENST00000390467 LYG1Q8N1E2 194 aa2.93□□□□□ -1.94
TRAV40-201ENST00000390467 BMPERQ8N8U9 685 aa2.93□□□□□ -1.94
TRAV40-201ENST00000390467 PCYOX1LQ8NBM8 494 aa2.93□□□□□ -1.94
TRAV40-201ENST00000390467 IL17REQ8NFR9 667 aa2.93□□□□□ -1.94
TRAV40-201ENST00000390467 RFFLQ8WZ73 363 aa2.93□□□□□ -1.94
TRAV40-201ENST00000390467 ARHGEF2Q92974 986 aaKnown RBP2.93□□□□□ -1.94
TRAV40-201ENST00000390467 TBATAQ96M53 351 aa2.93□□□□□ -1.94
TRAV40-201ENST00000390467 OR2A14Q96R47 310 aa2.93□□□□□ -1.94
TRAV40-201ENST00000390467 DDOQ99489 341 aa2.93□□□□□ -1.94
TRAV40-201ENST00000390467 RBM4BQ9BQ04 359 aaKnown RBP2.93□□□□□ -1.94
TRAV40-201ENST00000390467 UBXN6Q9BZV1 441 aa2.93□□□□□ -1.94
TRAV40-201ENST00000390467 PDCL3Q9H2J4 239 aa2.93□□□□□ -1.94
TRAV40-201ENST00000390467 PLK3Q9H4B4 646 aa2.93□□□□□ -1.94
TRAV40-201ENST00000390467 DENND2DQ9H6A0 471 aaPredicted RBP2.93□□□□□ -1.94
TRAV40-201ENST00000390467 OLFML3Q9NRN5 406 aa2.93□□□□□ -1.94
TRAV40-201ENST00000390467 ECHDC1Q9NTX5 307 aa2.93□□□□□ -1.94
TRAV40-201ENST00000390467 PAG1Q9NWQ8 432 aa2.93□□□□□ -1.94
TRAV40-201ENST00000390467 EHD2Q9NZN4 543 aa2.93□□□□□ -1.94
TRAV40-201ENST00000390467 EXOGQ9Y2C4 368 aaKnown RBP2.93□□□□□ -1.94
TRAV40-201ENST00000390467 GIMAP1-GIMAP5A0A087WTJ2 511 aa2.92□□□□□ -1.94
TRAV40-201ENST00000390467 A0A087WW49 117 aa2.92□□□□□ -1.94
TRAV40-201ENST00000390467 IGLV9-49A0A0B4J1Y8 123 aa2.92□□□□□ -1.94
TRAV40-201ENST00000390467 A8MZ25 164 aa2.92□□□□□ -1.94
TRAV40-201ENST00000390467 SCAMP1O15126 338 aa2.92□□□□□ -1.94
TRAV40-201ENST00000390467 DCXO43602 365 aa2.92□□□□□ -1.94
TRAV40-201ENST00000390467 TMCC2O75069 709 aa2.92□□□□□ -1.94
TRAV40-201ENST00000390467 MOCS3O95396 460 aa2.92□□□□□ -1.94
TRAV40-201ENST00000390467 RAF1P04049 648 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms