RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 SERHL2Q9H4I8 314 aa14.09□□□□□ -0.15
RTF1-201ENST00000389629 FBXO44Q9H4M3 255 aa14.09□□□□□ -0.15
RTF1-201ENST00000389629 SERHLQ9NQF3 203 aa14.09□□□□□ -0.15
RTF1-201ENST00000389629 ING3Q9NXR8 418 aa14.09□□□□□ -0.15
RTF1-201ENST00000389629 GMIPQ9P107 970 aa14.09□□□□□ -0.15
RTF1-201ENST00000389629 TCAF2A6NFQ2 919 aa14.09□□□□□ -0.15
RTF1-201ENST00000389629 SNX4O95219 450 aa14.09□□□□□ -0.15
RTF1-201ENST00000389629 SPIBQ01892 262 aa14.09□□□□□ -0.15
RTF1-201ENST00000389629 AFTPHQ6ULP2 937 aa14.09□□□□□ -0.15
RTF1-201ENST00000389629 ANKFN1Q8N957 763 aa14.09□□□□□ -0.15
RTF1-201ENST00000389629 UXS1Q8NBZ7 420 aa14.09□□□□□ -0.15
RTF1-201ENST00000389629 CDCA5Q96FF9 252 aa14.09□□□□□ -0.15
RTF1-201ENST00000389629 DIRAS2Q96HU8 199 aa14.09□□□□□ -0.15
RTF1-201ENST00000389629 CLN6Q9NWW5 311 aa14.09□□□□□ -0.15
RTF1-201ENST00000389629 MRPS7Q9Y2R9 242 aaKnown RBP14.09□□□□□ -0.15
RTF1-201ENST00000389629 RASAL1O95294 804 aa14.09□□□□□ -0.15
RTF1-201ENST00000389629 OTCP00480 354 aa14.09□□□□□ -0.15
RTF1-201ENST00000389629 FGF1P05230 155 aa14.09□□□□□ -0.15
RTF1-201ENST00000389629 MYF6P23409 242 aa14.09□□□□□ -0.15
RTF1-201ENST00000389629 KCNAB2Q13303 367 aa14.09□□□□□ -0.15
RTF1-201ENST00000389629 TAZQ16635 292 aa14.09□□□□□ -0.15
RTF1-201ENST00000389629 TMPRSS11AQ6ZMR5 421 aa14.09□□□□□ -0.15
RTF1-201ENST00000389629 HID1Q8IV36 788 aa14.09□□□□□ -0.15
RTF1-201ENST00000389629 SVOPLQ8N434 492 aa14.09□□□□□ -0.15
RTF1-201ENST00000389629 CNIH3Q8TBE1 160 aa14.09□□□□□ -0.15
RTF1-201ENST00000389629 ASZ1Q8WWH4 475 aa14.09□□□□□ -0.15
RTF1-201ENST00000389629 NACC2Q96BF6 587 aa14.09□□□□□ -0.15
RTF1-201ENST00000389629 SLC45A3Q96JT2 553 aa14.09□□□□□ -0.15
RTF1-201ENST00000389629 MAST2Q6P0Q8 1798 aa14.09□□□□□ -0.15
RTF1-201ENST00000389629 H0YJX3 145 aa14.08□□□□□ -0.15
RTF1-201ENST00000389629 RPP40O75818 363 aaKnown RBP14.08□□□□□ -0.15
RTF1-201ENST00000389629 DIRAS1O95057 198 aa14.08□□□□□ -0.15
RTF1-201ENST00000389629 CYP11A1P05108 521 aa14.08□□□□□ -0.15
RTF1-201ENST00000389629 MYCLP1P12525 358 aaPredicted RBP14.08□□□□□ -0.15
RTF1-201ENST00000389629 POU2F1P14859 743 aa14.08□□□□□ -0.15
RTF1-201ENST00000389629 NFE2Q16621 373 aaPredicted RBP14.08□□□□□ -0.15
RTF1-201ENST00000389629 ANKRD13BQ86YJ7 626 aa14.08□□□□□ -0.15
RTF1-201ENST00000389629 GTF3C2Q8WUA4 911 aaPredicted RBP14.08□□□□□ -0.15
RTF1-201ENST00000389629 C12orf42Q96LP6 360 aa14.08□□□□□ -0.15
RTF1-201ENST00000389629 FAM126AQ9BYI3 521 aaPredicted RBP14.08□□□□□ -0.15
RTF1-201ENST00000389629 PGK1P00558 417 aa14.08□□□□□ -0.16
RTF1-201ENST00000389629 MAGEA6P43360 314 aa14.08□□□□□ -0.16
RTF1-201ENST00000389629 EEFSECP57772 596 aaKnown RBP14.08□□□□□ -0.16
RTF1-201ENST00000389629 INHBEP58166 350 aa14.08□□□□□ -0.16
RTF1-201ENST00000389629 TIGD6Q17RP2 521 aa14.08□□□□□ -0.16
RTF1-201ENST00000389629 DDI2Q5TDH0 399 aa14.08□□□□□ -0.16
RTF1-201ENST00000389629 ELMSAN1Q6PJG2 1045 aa14.08□□□□□ -0.16
RTF1-201ENST00000389629 ZNF534Q76KX8 674 aa14.08□□□□□ -0.16
RTF1-201ENST00000389629 CARNMT1Q8N4J0 409 aa14.08□□□□□ -0.16
RTF1-201ENST00000389629 GPR152Q8TDT2 470 aa14.08□□□□□ -0.16
RTF1-201ENST00000389629 ZUFSPQ96AP4 578 aa14.08□□□□□ -0.16
RTF1-201ENST00000389629 ITPKCQ96DU7 683 aa14.08□□□□□ -0.16
RTF1-201ENST00000389629 CNPPD1Q9BV87 410 aa14.08□□□□□ -0.16
RTF1-201ENST00000389629 RNF39Q9H2S5 420 aa14.08□□□□□ -0.16
RTF1-201ENST00000389629 VPS28Q9UK41 221 aa14.08□□□□□ -0.16
RTF1-201ENST00000389629 AP3M1Q9Y2T2 418 aa14.08□□□□□ -0.16
RTF1-201ENST00000389629 ZCWPW2A0A1B0GU75 182 aa14.08□□□□□ -0.16
RTF1-201ENST00000389629 MBL2P11226 248 aaPredicted RBP14.08□□□□□ -0.16
RTF1-201ENST00000389629 EPB42P16452 691 aa14.08□□□□□ -0.16
RTF1-201ENST00000389629 BLVRAP53004 296 aa14.08□□□□□ -0.16
RTF1-201ENST00000389629 ABATP80404 500 aa14.08□□□□□ -0.16
RTF1-201ENST00000389629 ACSM2AQ08AH3 577 aa14.08□□□□□ -0.16
RTF1-201ENST00000389629 BOP1Q14137 746 aaKnown RBP14.08□□□□□ -0.16
RTF1-201ENST00000389629 C6orf141Q5SZD1 244 aa14.08□□□□□ -0.16
RTF1-201ENST00000389629 ACSM2BQ68CK6 577 aa14.08□□□□□ -0.16
RTF1-201ENST00000389629 CHERPQ8IWX8 916 aaKnown RBP14.08□□□□□ -0.16
RTF1-201ENST00000389629 DEPDC4Q8N2C3 294 aa14.08□□□□□ -0.16
RTF1-201ENST00000389629 ERVK-11Q9UQG0 969 aa14.08□□□□□ -0.16
RTF1-201ENST00000389629 PCDHB3Q9Y5E6 796 aa14.08□□□□□ -0.16
RTF1-201ENST00000389629 PRSS51A0A1B0GVH4 220 aa14.08□□□□□ -0.16
RTF1-201ENST00000389629 HAT1O14929 419 aa14.08□□□□□ -0.16
RTF1-201ENST00000389629 SLC7A4O43246 635 aa14.08□□□□□ -0.16
RTF1-201ENST00000389629 COQ9O75208 318 aa14.08□□□□□ -0.16
RTF1-201ENST00000389629 IFNA14P01570 189 aa14.08□□□□□ -0.16
RTF1-201ENST00000389629 C8BP07358 591 aa14.08□□□□□ -0.16
RTF1-201ENST00000389629 UROSP10746 265 aa14.08□□□□□ -0.16
RTF1-201ENST00000389629 EFNA1P20827 205 aaPredicted RBP14.08□□□□□ -0.16
RTF1-201ENST00000389629 NUDT6P53370 316 aa14.08□□□□□ -0.16
RTF1-201ENST00000389629 ZNF404Q494X3 552 aa14.08□□□□□ -0.16
RTF1-201ENST00000389629 SDE2Q6IQ49 451 aa14.08□□□□□ -0.16
RTF1-201ENST00000389629 KDM1BQ8NB78 822 aa14.08□□□□□ -0.16
RTF1-201ENST00000389629 TFAP2CQ92754 450 aa14.08□□□□□ -0.16
RTF1-201ENST00000389629 VRTNQ9H8Y1 702 aa14.08□□□□□ -0.16
RTF1-201ENST00000389629 TLR8Q9NR97 1041 aaKnown RBP14.08□□□□□ -0.16
RTF1-201ENST00000389629 SAMD4AQ9UPU9 718 aaKnown RBP14.08□□□□□ -0.16
RTF1-201ENST00000389629 DDNO94850 711 aaPredicted RBP14.07□□□□□ -0.16
RTF1-201ENST00000389629 AP2A2O94973 939 aa14.07□□□□□ -0.16
RTF1-201ENST00000389629 PROZP22891 400 aa14.07□□□□□ -0.16
RTF1-201ENST00000389629 HPCAL1P37235 193 aa14.07□□□□□ -0.16
RTF1-201ENST00000389629 TTPAP49638 278 aa14.07□□□□□ -0.16
RTF1-201ENST00000389629 GRB7Q14451 532 aa14.07□□□□□ -0.16
RTF1-201ENST00000389629 PTCHD4Q6ZW05 846 aa14.07□□□□□ -0.16
RTF1-201ENST00000389629 RASAL3Q86YV0 1011 aa14.07□□□□□ -0.16
RTF1-201ENST00000389629 EPHX4Q8IUS5 362 aa14.07□□□□□ -0.16
RTF1-201ENST00000389629 ACVR1CQ8NER5 493 aa14.07□□□□□ -0.16
RTF1-201ENST00000389629 NCSTNQ92542 709 aa14.07□□□□□ -0.16
RTF1-201ENST00000389629 KLHL1Q9NR64 748 aa14.07□□□□□ -0.16
RTF1-201ENST00000389629 PCDHGB5Q9Y5G0 923 aa14.07□□□□□ -0.16
RTF1-201ENST00000389629 SCN7AQ01118 1682 aa14.07□□□□□ -0.16
RTF1-201ENST00000389629 HMX2A2RU54 273 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms