RNA–Protein interactions for RNA: ENST00000389609.8

CCDC149-202, Transcript of coiled-coil domain containing 149, humanhuman

APPRIS P3 TSL 2 BASIC

Gene CCDC149, Length 2,127 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149-202ENST00000389609 ZFYVE28Q9HCC9 887 aa11.25□□□□□ -0.61
CCDC149-202ENST00000389609 MED16Q9Y2X0 877 aa11.25□□□□□ -0.61
CCDC149-202ENST00000389609 NAALAD2Q9Y3Q0 740 aa11.25□□□□□ -0.61
CCDC149-202ENST00000389609 MYO16Q9Y6X6 1858 aa11.25□□□□□ -0.61
CCDC149-202ENST00000389609 CCL22O00626 93 aa11.24□□□□□ -0.61
CCDC149-202ENST00000389609 DUSP11O75319 330 aaKnown RBP11.24□□□□□ -0.61
CCDC149-202ENST00000389609 NDUFS3O75489 264 aa11.24□□□□□ -0.61
CCDC149-202ENST00000389609 SLC4A1P02730 911 aa11.24□□□□□ -0.61
CCDC149-202ENST00000389609 ZNF182P17025 639 aaPredicted RBP11.24□□□□□ -0.61
CCDC149-202ENST00000389609 TCEA1P23193 301 aaKnown RBP11.24□□□□□ -0.61
CCDC149-202ENST00000389609 BRCC3P46736 316 aa11.24□□□□□ -0.61
CCDC149-202ENST00000389609 DIO3P55073 304 aa11.24□□□□□ -0.61
CCDC149-202ENST00000389609 GNA12Q03113 381 aa11.24□□□□□ -0.61
CCDC149-202ENST00000389609 CHRNB3Q05901 458 aa11.24□□□□□ -0.61
CCDC149-202ENST00000389609 SETMARQ53H47 684 aaPredicted RBP11.24□□□□□ -0.61
CCDC149-202ENST00000389609 PAGE3Q5JUK9 113 aa11.24□□□□□ -0.61
CCDC149-202ENST00000389609 AGAP7PQ5VUJ5 663 aa11.24□□□□□ -0.61
CCDC149-202ENST00000389609 GLYATQ6IB77 296 aa11.24□□□□□ -0.61
CCDC149-202ENST00000389609 FBXL22Q6P050 247 aa11.24□□□□□ -0.61
CCDC149-202ENST00000389609 GALNT18Q6P9A2 607 aa11.24□□□□□ -0.61
CCDC149-202ENST00000389609 TFAP2DQ7Z6R9 452 aa11.24□□□□□ -0.61
CCDC149-202ENST00000389609 SYVN1Q86TM6 617 aa11.24□□□□□ -0.61
CCDC149-202ENST00000389609 RYBPQ8N488 228 aaPredicted RBP11.24□□□□□ -0.61
CCDC149-202ENST00000389609 PROKR1Q8TCW9 393 aa11.24□□□□□ -0.61
CCDC149-202ENST00000389609 MAGEE2Q8TD90 523 aaPredicted RBP11.24□□□□□ -0.61
CCDC149-202ENST00000389609 GIPC2Q8TF65 315 aa11.24□□□□□ -0.61
CCDC149-202ENST00000389609 HPS1Q92902 700 aa11.24□□□□□ -0.61
CCDC149-202ENST00000389609 ZNF566Q969W8 418 aa11.24□□□□□ -0.61
CCDC149-202ENST00000389609 FBXL20Q96IG2 436 aa11.24□□□□□ -0.61
CCDC149-202ENST00000389609 NSUN5Q96P11 429 aaKnown RBP11.24□□□□□ -0.61
CCDC149-202ENST00000389609 KLHL5Q96PQ7 755 aa11.24□□□□□ -0.61
CCDC149-202ENST00000389609 PSKH2Q96QS6 385 aa11.24□□□□□ -0.61
CCDC149-202ENST00000389609 CDK5RAP1Q96SZ6 601 aaKnown RBP11.24□□□□□ -0.61
CCDC149-202ENST00000389609 DNAJB9Q9UBS3 223 aa11.24□□□□□ -0.61
CCDC149-202ENST00000389609 VPS51Q9UID3 782 aa11.24□□□□□ -0.61
CCDC149-202ENST00000389609 DAPK2Q9UIK4 370 aa11.24□□□□□ -0.61
CCDC149-202ENST00000389609 NUDT5Q9UKK9 219 aa11.24□□□□□ -0.61
CCDC149-202ENST00000389609 PSME2Q9UL46 239 aa11.24□□□□□ -0.61
CCDC149-202ENST00000389609 PCDHGB1Q9Y5G3 927 aa11.24□□□□□ -0.61
CCDC149-202ENST00000389609 GBF1Q92538 1859 aa11.24□□□□□ -0.61
CCDC149-202ENST00000389609 ANKRD34BA5PLL1 514 aa11.24□□□□□ -0.61
CCDC149-202ENST00000389609 OR51F1A6NGY5 319 aa11.24□□□□□ -0.61
CCDC149-202ENST00000389609 C2orf81A6NN90 581 aa11.24□□□□□ -0.61
CCDC149-202ENST00000389609 UPK1AO00322 258 aa11.24□□□□□ -0.61
CCDC149-202ENST00000389609 ESR1P03372 595 aa11.24□□□□□ -0.61
CCDC149-202ENST00000389609 AKR1A1P14550 325 aa11.24□□□□□ -0.61
CCDC149-202ENST00000389609 PKMP14618 531 aaKnown RBP11.24□□□□□ -0.61
CCDC149-202ENST00000389609 PGFP49763 221 aa11.24□□□□□ -0.61
CCDC149-202ENST00000389609 SMARCB1Q12824 385 aa11.24□□□□□ -0.61
CCDC149-202ENST00000389609 SEMA3AQ14563 771 aa11.24□□□□□ -0.61
CCDC149-202ENST00000389609 PLA2G4EQ3MJ16 856 aa11.24□□□□□ -0.61
CCDC149-202ENST00000389609 ALFQ53S48 1182 aa11.24□□□□□ -0.61
CCDC149-202ENST00000389609 RABL3Q5HYI8 236 aa11.24□□□□□ -0.61
CCDC149-202ENST00000389609 TTC23LQ6PF05 361 aa11.24□□□□□ -0.61
CCDC149-202ENST00000389609 PAQR3Q6TCH7 311 aa11.24□□□□□ -0.61
CCDC149-202ENST00000389609 DLEU7Q6UYE1 221 aa11.24□□□□□ -0.61
CCDC149-202ENST00000389609 ZC3H7AQ8IWR0 971 aaKnown RBP11.24□□□□□ -0.61
CCDC149-202ENST00000389609 C8orf59Q8N0T1 100 aaPredicted RBP11.24□□□□□ -0.61
CCDC149-202ENST00000389609 DNAJB14Q8TBM8 379 aa11.24□□□□□ -0.61
CCDC149-202ENST00000389609 BLOC1S5Q8TDH9 187 aa11.24□□□□□ -0.61
CCDC149-202ENST00000389609 SH3RF2Q8TEC5 729 aa11.24□□□□□ -0.61
CCDC149-202ENST00000389609 SOCS4Q8WXH5 440 aa11.24□□□□□ -0.61
CCDC149-202ENST00000389609 PPP3R2Q96LZ3 170 aa11.24□□□□□ -0.61
CCDC149-202ENST00000389609 SMPD4Q9NXE4 827 aa11.24□□□□□ -0.61
CCDC149-202ENST00000389609 GIMAP2Q9UG22 337 aa11.24□□□□□ -0.61
CCDC149-202ENST00000389609 IFT52Q9Y366 437 aa11.24□□□□□ -0.61
CCDC149-202ENST00000389609 PTGDR2Q9Y5Y4 395 aa11.24□□□□□ -0.61
CCDC149-202ENST00000389609 SCN10AQ9Y5Y9 1956 aa11.24□□□□□ -0.61
CCDC149-202ENST00000389609 CEP350Q5VT06 3117 aa11.24□□□□□ -0.61
CCDC149-202ENST00000389609 FAM149AA5PLN7 773 aa11.23□□□□□ -0.61
CCDC149-202ENST00000389609 E2F3O00716 465 aa11.23□□□□□ -0.61
CCDC149-202ENST00000389609 PPP6CO00743 305 aa11.23□□□□□ -0.61
CCDC149-202ENST00000389609 SYN3O14994 580 aa11.23□□□□□ -0.61
CCDC149-202ENST00000389609 TPST1O60507 370 aa11.23□□□□□ -0.61
CCDC149-202ENST00000389609 CLPXO76031 633 aa11.23□□□□□ -0.61
CCDC149-202ENST00000389609 WDR47O94967 919 aa11.23□□□□□ -0.61
CCDC149-202ENST00000389609 SCELO95171 688 aa11.23□□□□□ -0.61
CCDC149-202ENST00000389609 TSPAN12O95859 305 aa11.23□□□□□ -0.61
CCDC149-202ENST00000389609 BCL10O95999 233 aa11.23□□□□□ -0.61
CCDC149-202ENST00000389609 CHRNA1P02708 482 aa11.23□□□□□ -0.61
CCDC149-202ENST00000389609 ITIH1P19827 911 aa11.23□□□□□ -0.61
CCDC149-202ENST00000389609 MAP4P27816 1152 aaKnown RBP11.23□□□□□ -0.61
CCDC149-202ENST00000389609 IL2P60568 153 aa11.23□□□□□ -0.61
CCDC149-202ENST00000389609 TRAF2Q12933 501 aa11.23□□□□□ -0.61
CCDC149-202ENST00000389609 TSNQ15631 228 aaKnown RBP11.23□□□□□ -0.61
CCDC149-202ENST00000389609 VARS2Q5ST30 1063 aaKnown RBP11.23□□□□□ -0.61
CCDC149-202ENST00000389609 GTF2IRD2BQ6EKJ0 949 aa11.23□□□□□ -0.61
CCDC149-202ENST00000389609 ADAMTSL2Q86TH1 951 aa11.23□□□□□ -0.61
CCDC149-202ENST00000389609 GTF2IRD2Q86UP8 949 aa11.23□□□□□ -0.61
CCDC149-202ENST00000389609 GPSM1Q86YR5 675 aa11.23□□□□□ -0.61
CCDC149-202ENST00000389609 ZDHHC13Q8IUH4 622 aa11.23□□□□□ -0.61
CCDC149-202ENST00000389609 FAM9CQ8IZT9 166 aa11.23□□□□□ -0.61
CCDC149-202ENST00000389609 VPS33AQ96AX1 596 aa11.23□□□□□ -0.61
CCDC149-202ENST00000389609 KCNA7Q96RP8 456 aa11.23□□□□□ -0.61
CCDC149-202ENST00000389609 RBM4BQ9BQ04 359 aaKnown RBP11.23□□□□□ -0.61
CCDC149-202ENST00000389609 RBM4Q9BWF3 364 aaKnown RBP11.23□□□□□ -0.61
CCDC149-202ENST00000389609 NTN4Q9HB63 628 aa11.23□□□□□ -0.61
CCDC149-202ENST00000389609 SEMA4BQ9NPR2 832 aaPredicted RBP11.23□□□□□ -0.61
CCDC149-202ENST00000389609 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.23□□□□□ -0.61
CCDC149-202ENST00000389609 TRMT6Q9UJA5 497 aaKnown RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms