RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 NIF3L1Q9GZT8 377 aa7.4□□□□□ -1.23
CDKL5-201ENST00000379989 NUAK2Q9H093 628 aa7.4□□□□□ -1.23
CDKL5-201ENST00000379989 ELP3Q9H9T3 547 aa7.4□□□□□ -1.23
CDKL5-201ENST00000379989 C14orf119Q9NWQ9 140 aa7.4□□□□□ -1.23
CDKL5-201ENST00000379989 USTQ9Y2C2 406 aa7.4□□□□□ -1.23
CDKL5-201ENST00000379989 A0A0U1RQS6 177 aa7.39□□□□□ -1.23
CDKL5-201ENST00000379989 DHRS12A0PJE2 317 aa7.39□□□□□ -1.23
CDKL5-201ENST00000379989 CCDC154A6NI56 674 aa7.39□□□□□ -1.23
CDKL5-201ENST00000379989 APOL1O14791 398 aa7.39□□□□□ -1.23
CDKL5-201ENST00000379989 SLC2A3P11169 496 aa7.39□□□□□ -1.23
CDKL5-201ENST00000379989 TCF4P15884 667 aa7.39□□□□□ -1.23
CDKL5-201ENST00000379989 TFE3P19532 575 aaPredicted RBP7.39□□□□□ -1.23
CDKL5-201ENST00000379989 RAB3AP20336 220 aa7.39□□□□□ -1.23
CDKL5-201ENST00000379989 FSHRP23945 695 aa7.39□□□□□ -1.23
CDKL5-201ENST00000379989 NSFP46459 744 aaKnown RBP7.39□□□□□ -1.23
CDKL5-201ENST00000379989 CAPZA2P47755 286 aa7.39□□□□□ -1.23
CDKL5-201ENST00000379989 AKR1D1P51857 326 aa7.39□□□□□ -1.23
CDKL5-201ENST00000379989 GABARAPL2P60520 117 aa7.39□□□□□ -1.23
CDKL5-201ENST00000379989 EMX1Q04741 257 aaPredicted RBP7.39□□□□□ -1.23
CDKL5-201ENST00000379989 PRKCDQ05655 676 aa7.39□□□□□ -1.23
CDKL5-201ENST00000379989 LAMTOR4Q0VGL1 99 aa7.39□□□□□ -1.23
CDKL5-201ENST00000379989 GRB14Q14449 540 aa7.39□□□□□ -1.23
CDKL5-201ENST00000379989 RBM20Q5T481 1227 aaKnown RBP7.39□□□□□ -1.23
CDKL5-201ENST00000379989 NAPRTQ6XQN6 538 aa7.39□□□□□ -1.23
CDKL5-201ENST00000379989 GK5Q6ZS86 529 aa7.39□□□□□ -1.23
CDKL5-201ENST00000379989 NECAB2Q7Z6G3 386 aa7.39□□□□□ -1.23
CDKL5-201ENST00000379989 ZSWIM9Q86XI8 627 aa7.39□□□□□ -1.23
CDKL5-201ENST00000379989 SPATA2LQ8IUW3 424 aaPredicted RBP7.39□□□□□ -1.23
CDKL5-201ENST00000379989 PLD3Q8IV08 490 aa7.39□□□□□ -1.23
CDKL5-201ENST00000379989 SCUBE3Q8IX30 993 aa7.39□□□□□ -1.23
CDKL5-201ENST00000379989 ATAD1Q8NBU5 361 aa7.39□□□□□ -1.23
CDKL5-201ENST00000379989 SMG7Q92540 1137 aaKnown RBP7.39□□□□□ -1.23
CDKL5-201ENST00000379989 SLC9A6Q92581 669 aa7.39□□□□□ -1.23
CDKL5-201ENST00000379989 LGALS12Q96DT0 336 aa7.39□□□□□ -1.23
CDKL5-201ENST00000379989 SIPA1Q96FS4 1042 aa7.39□□□□□ -1.23
CDKL5-201ENST00000379989 PDXPQ96GD0 296 aa7.39□□□□□ -1.23
CDKL5-201ENST00000379989 MAGEB10Q96LZ2 347 aaPredicted RBP7.39□□□□□ -1.23
CDKL5-201ENST00000379989 OR2A14Q96R47 310 aa7.39□□□□□ -1.23
CDKL5-201ENST00000379989 FAM213AQ9BRX8 229 aa7.39□□□□□ -1.23
CDKL5-201ENST00000379989 MLPHQ9BV36 600 aaPredicted RBP7.39□□□□□ -1.23
CDKL5-201ENST00000379989 RANBP3Q9H6Z4 567 aaPredicted RBP7.39□□□□□ -1.23
CDKL5-201ENST00000379989 TRMT13Q9NUP7 481 aaKnown RBP7.39□□□□□ -1.23
CDKL5-201ENST00000379989 COA4Q9NYJ1 87 aa7.39□□□□□ -1.23
CDKL5-201ENST00000379989 KLHL42Q9P2K6 505 aa7.39□□□□□ -1.23
CDKL5-201ENST00000379989 PDE10AQ9Y233 779 aa7.39□□□□□ -1.23
CDKL5-201ENST00000379989 HSPB11Q9Y547 144 aa7.39□□□□□ -1.23
CDKL5-201ENST00000379989 TFECO14948 347 aaPredicted RBP7.39□□□□□ -1.23
CDKL5-201ENST00000379989 FZD6O60353 706 aa7.39□□□□□ -1.23
CDKL5-201ENST00000379989 SNX4O95219 450 aa7.39□□□□□ -1.23
CDKL5-201ENST00000379989 GLAP06280 429 aa7.39□□□□□ -1.23
CDKL5-201ENST00000379989 KRT19P08727 400 aa7.39□□□□□ -1.23
CDKL5-201ENST00000379989 HSMCR30P0CW71 290 aa7.39□□□□□ -1.23
CDKL5-201ENST00000379989 TNNI1P19237 187 aa7.39□□□□□ -1.23
CDKL5-201ENST00000379989 OXTRP30559 389 aa7.39□□□□□ -1.23
CDKL5-201ENST00000379989 SCNN1AP37088 669 aa7.39□□□□□ -1.23
CDKL5-201ENST00000379989 GBX2P52951 348 aaPredicted RBP7.39□□□□□ -1.23
CDKL5-201ENST00000379989 SP2Q02086 613 aa7.39□□□□□ -1.23
CDKL5-201ENST00000379989 RELQ04864 619 aaPredicted RBP7.39□□□□□ -1.23
CDKL5-201ENST00000379989 GRIK2Q13002 908 aa7.39□□□□□ -1.23
CDKL5-201ENST00000379989 CBLBQ13191 982 aa7.39□□□□□ -1.23
CDKL5-201ENST00000379989 PDSS1Q5T2R2 415 aa7.39□□□□□ -1.23
CDKL5-201ENST00000379989 SULT1C3Q6IMI6 304 aa7.39□□□□□ -1.23
CDKL5-201ENST00000379989 LIMS2Q7Z4I7 341 aa7.39□□□□□ -1.23
CDKL5-201ENST00000379989 THAP5Q7Z6K1 395 aa7.39□□□□□ -1.23
CDKL5-201ENST00000379989 MCOLN2Q8IZK6 566 aa7.39□□□□□ -1.23
CDKL5-201ENST00000379989 ZNF366Q8N895 744 aa7.39□□□□□ -1.23
CDKL5-201ENST00000379989 CHDHQ8NE62 594 aaPredicted RBP7.39□□□□□ -1.23
CDKL5-201ENST00000379989 OR8H1Q8NGG4 311 aa7.39□□□□□ -1.23
CDKL5-201ENST00000379989 ATOH1Q92858 354 aaPredicted RBP7.39□□□□□ -1.23
CDKL5-201ENST00000379989 PTERQ96BW5 349 aa7.39□□□□□ -1.23
CDKL5-201ENST00000379989 TRMT61AQ96FX7 289 aaKnown RBP7.39□□□□□ -1.23
CDKL5-201ENST00000379989 ZNF668Q96K58 619 aaPredicted RBP7.39□□□□□ -1.23
CDKL5-201ENST00000379989 UBXN10Q96LJ8 280 aa7.39□□□□□ -1.23
CDKL5-201ENST00000379989 SPATA33Q96N06 139 aa7.39□□□□□ -1.23
CDKL5-201ENST00000379989 CPXM1Q96SM3 734 aa7.39□□□□□ -1.23
CDKL5-201ENST00000379989 TNKS2Q9H2K2 1166 aa7.39□□□□□ -1.23
CDKL5-201ENST00000379989 LRRC4Q9HBW1 653 aa7.39□□□□□ -1.23
CDKL5-201ENST00000379989 PCDHB16Q9NRJ7 776 aa7.39□□□□□ -1.23
CDKL5-201ENST00000379989 TBC1D13Q9NVG8 400 aa7.39□□□□□ -1.23
CDKL5-201ENST00000379989 KIF17Q9P2E2 1029 aa7.39□□□□□ -1.23
CDKL5-201ENST00000379989 SAE1Q9UBE0 346 aaPredicted RBP7.39□□□□□ -1.23
CDKL5-201ENST00000379989 SARDHQ9UL12 918 aa7.39□□□□□ -1.23
CDKL5-201ENST00000379989 PCDHB3Q9Y5E6 796 aa7.39□□□□□ -1.23
CDKL5-201ENST00000379989 SNX5Q9Y5X3 404 aa7.39□□□□□ -1.23
CDKL5-201ENST00000379989 SH3D21A4FU49 640 aa7.39□□□□□ -1.23
CDKL5-201ENST00000379989 TLL1O43897 1013 aa7.39□□□□□ -1.23
CDKL5-201ENST00000379989 HSPA4LO95757 839 aa7.39□□□□□ -1.23
CDKL5-201ENST00000379989 EPOP01588 193 aa7.39□□□□□ -1.23
CDKL5-201ENST00000379989 APOC1P02654 83 aa7.39□□□□□ -1.23
CDKL5-201ENST00000379989 TXNP10599 105 aaKnown RBP7.39□□□□□ -1.23
CDKL5-201ENST00000379989 AGXTP21549 392 aa7.39□□□□□ -1.23
CDKL5-201ENST00000379989 RPS5P46782 204 aaKnown RBP7.39□□□□□ -1.23
CDKL5-201ENST00000379989 DGKQP52824 942 aa7.39□□□□□ -1.23
CDKL5-201ENST00000379989 NRLP54845 237 aa7.39□□□□□ -1.23
CDKL5-201ENST00000379989 IRF3Q14653 427 aa7.39□□□□□ -1.23
CDKL5-201ENST00000379989 MEP1AQ16819 746 aa7.39□□□□□ -1.23
CDKL5-201ENST00000379989 SETMARQ53H47 684 aaPredicted RBP7.39□□□□□ -1.23
CDKL5-201ENST00000379989 C6orf141Q5SZD1 244 aa7.39□□□□□ -1.23
CDKL5-201ENST00000379989 LAIR2Q6ISS4 152 aa7.39□□□□□ -1.23
CDKL5-201ENST00000379989 FAM35AQ86V20 835 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms