RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 XRCC1P18887 633 aaPredicted RBP10.32□□□□□ -0.76
POLR2J3-201ENST00000379340 MSH3P20585 1137 aa10.32□□□□□ -0.76
POLR2J3-201ENST00000379340 CTSOP43234 321 aaPredicted RBP10.32□□□□□ -0.76
POLR2J3-201ENST00000379340 RECQLP46063 649 aaPredicted RBP10.32□□□□□ -0.76
POLR2J3-201ENST00000379340 STK19P49842 368 aaPredicted RBP10.32□□□□□ -0.76
POLR2J3-201ENST00000379340 CCNHP51946 323 aaPredicted RBP10.32□□□□□ -0.76
POLR2J3-201ENST00000379340 FOXA1P55317 472 aa10.32□□□□□ -0.76
POLR2J3-201ENST00000379340 ECT2LQ008S8 904 aa10.32□□□□□ -0.76
POLR2J3-201ENST00000379340 KLC1Q07866 573 aa10.32□□□□□ -0.76
POLR2J3-201ENST00000379340 PTPRRQ15256 657 aa10.32□□□□□ -0.76
POLR2J3-201ENST00000379340 RPS6KA2Q15349 733 aa10.32□□□□□ -0.76
POLR2J3-201ENST00000379340 CHRNA6Q15825 494 aa10.32□□□□□ -0.76
POLR2J3-201ENST00000379340 ZNF77Q15935 545 aa10.32□□□□□ -0.76
POLR2J3-201ENST00000379340 PDCD4Q53EL6 469 aaKnown RBP10.32□□□□□ -0.76
POLR2J3-201ENST00000379340 IRAK1BP1Q5VVH5 260 aa10.32□□□□□ -0.76
POLR2J3-201ENST00000379340 TRIM68Q6AZZ1 485 aa10.32□□□□□ -0.76
POLR2J3-201ENST00000379340 SULT1C3Q6IMI6 304 aa10.32□□□□□ -0.76
POLR2J3-201ENST00000379340 BRAT1Q6PJG6 821 aa10.32□□□□□ -0.76
POLR2J3-201ENST00000379340 SBSNQ6UWP8 590 aa10.32□□□□□ -0.76
POLR2J3-201ENST00000379340 IZUMO2Q6UXV1 221 aa10.32□□□□□ -0.76
POLR2J3-201ENST00000379340 WDFY4Q6ZS81 3184 aa10.32□□□□□ -0.76
POLR2J3-201ENST00000379340 KIAA0907Q7Z7F0 614 aaPredicted RBP10.32□□□□□ -0.76
POLR2J3-201ENST00000379340 ZSWIM9Q86XI8 627 aa10.32□□□□□ -0.76
POLR2J3-201ENST00000379340 APLFQ8IW19 511 aaPredicted RBP10.32□□□□□ -0.76
POLR2J3-201ENST00000379340 AHI1Q8N157 1196 aa10.32□□□□□ -0.76
POLR2J3-201ENST00000379340 PLCD3Q8N3E9 789 aa10.32□□□□□ -0.76
POLR2J3-201ENST00000379340 RPL10LQ96L21 214 aaKnown RBP10.32□□□□□ -0.76
POLR2J3-201ENST00000379340 NR1H4Q96RI1 486 aaPredicted RBP10.32□□□□□ -0.76
POLR2J3-201ENST00000379340 KCNA7Q96RP8 456 aa10.32□□□□□ -0.76
POLR2J3-201ENST00000379340 BBS2Q9BXC9 721 aa10.32□□□□□ -0.76
POLR2J3-201ENST00000379340 YY1AP1Q9H869 796 aa10.32□□□□□ -0.76
POLR2J3-201ENST00000379340 AIG1Q9NVV5 245 aa10.32□□□□□ -0.76
POLR2J3-201ENST00000379340 GID8Q9NWU2 228 aa10.32□□□□□ -0.76
POLR2J3-201ENST00000379340 ADA2Q9NZK5 511 aa10.32□□□□□ -0.76
POLR2J3-201ENST00000379340 PKD2L2Q9NZM6 624 aa10.32□□□□□ -0.76
POLR2J3-201ENST00000379340 EIF2B4Q9UI10 523 aaKnown RBP10.32□□□□□ -0.76
POLR2J3-201ENST00000379340 CACNA1AO00555 2505 aa10.32□□□□□ -0.76
POLR2J3-201ENST00000379340 ZDBF2Q9HCK1 2354 aa10.32□□□□□ -0.76
POLR2J3-201ENST00000379340 PLXNB3Q9ULL4 1909 aa10.32□□□□□ -0.76
POLR2J3-201ENST00000379340 GRXCR2A6NFK2 248 aa10.31□□□□□ -0.76
POLR2J3-201ENST00000379340 IQCF5A8MTL0 148 aa10.31□□□□□ -0.76
POLR2J3-201ENST00000379340 HIDE1A8MVS5 230 aa10.31□□□□□ -0.76
POLR2J3-201ENST00000379340 NEDD8-MDP1E9PL57 170 aa10.31□□□□□ -0.76
POLR2J3-201ENST00000379340 ZNF197O14709 1029 aa10.31□□□□□ -0.76
POLR2J3-201ENST00000379340 ACOT8O14734 319 aa10.31□□□□□ -0.76
POLR2J3-201ENST00000379340 ANGPT2O15123 496 aa10.31□□□□□ -0.76
POLR2J3-201ENST00000379340 FFAR2O15552 330 aa10.31□□□□□ -0.76
POLR2J3-201ENST00000379340 LINC00032P0C843 101 aa10.31□□□□□ -0.76
POLR2J3-201ENST00000379340 CHRM1P11229 460 aaPredicted RBP10.31□□□□□ -0.76
POLR2J3-201ENST00000379340 VCLP18206 1134 aa10.31□□□□□ -0.76
POLR2J3-201ENST00000379340 GKP32189 559 aa10.31□□□□□ -0.76
POLR2J3-201ENST00000379340 DPP6P42658 865 aa10.31□□□□□ -0.76
POLR2J3-201ENST00000379340 PIK3CGP48736 1102 aa10.31□□□□□ -0.76
POLR2J3-201ENST00000379340 AGTR2P50052 363 aa10.31□□□□□ -0.76
POLR2J3-201ENST00000379340 ERVK-8P63133 956 aa10.31□□□□□ -0.76
POLR2J3-201ENST00000379340 TRIM25Q14258 630 aaKnown RBP10.31□□□□□ -0.76
POLR2J3-201ENST00000379340 SMU1Q2TAY7 513 aa10.31□□□□□ -0.76
POLR2J3-201ENST00000379340 GPRC6AQ5T6X5 926 aa10.31□□□□□ -0.76
POLR2J3-201ENST00000379340 LRRC66Q68CR7 880 aa10.31□□□□□ -0.76
POLR2J3-201ENST00000379340 PAOXQ6QHF9 649 aa10.31□□□□□ -0.76
POLR2J3-201ENST00000379340 GDPD4Q6W3E5 623 aa10.31□□□□□ -0.76
POLR2J3-201ENST00000379340 TMEM25Q86YD3 366 aa10.31□□□□□ -0.76
POLR2J3-201ENST00000379340 FUNDC1Q8IVP5 155 aa10.31□□□□□ -0.76
POLR2J3-201ENST00000379340 PQLC1Q8N2U9 271 aa10.31□□□□□ -0.76
POLR2J3-201ENST00000379340 EFCAB3Q8N7B9 438 aa10.31□□□□□ -0.76
POLR2J3-201ENST00000379340 BHLHE22Q8NFJ8 381 aaPredicted RBP10.31□□□□□ -0.76
POLR2J3-201ENST00000379340 SPPL3Q8TCT6 385 aa10.31□□□□□ -0.76
POLR2J3-201ENST00000379340 HCAR2Q8TDS4 363 aa10.31□□□□□ -0.76
POLR2J3-201ENST00000379340 POF1BQ8WVV4 589 aa10.31□□□□□ -0.76
POLR2J3-201ENST00000379340 PPP2R3CQ969Q6 453 aa10.31□□□□□ -0.76
POLR2J3-201ENST00000379340 PBXIP1Q96AQ6 731 aa10.31□□□□□ -0.76
POLR2J3-201ENST00000379340 COPS8Q99627 209 aa10.31□□□□□ -0.76
POLR2J3-201ENST00000379340 BOCQ9BWV1 1114 aa10.31□□□□□ -0.76
POLR2J3-201ENST00000379340 BRINP2Q9C0B6 783 aa10.31□□□□□ -0.76
POLR2J3-201ENST00000379340 SMG9Q9H0W8 520 aaKnown RBP10.31□□□□□ -0.76
POLR2J3-201ENST00000379340 ZDHHC6Q9H6R6 413 aa10.31□□□□□ -0.76
POLR2J3-201ENST00000379340 FBRSL1Q9HCM7 1045 aaKnown RBP10.31□□□□□ -0.76
POLR2J3-201ENST00000379340 HCFC1R1Q9NWW0 138 aa10.31□□□□□ -0.76
POLR2J3-201ENST00000379340 ZIM2Q9NZV7 527 aa10.31□□□□□ -0.76
POLR2J3-201ENST00000379340 TMEM181Q9P2C4 612 aa10.31□□□□□ -0.76
POLR2J3-201ENST00000379340 NFKBIL1Q9UBC1 381 aaPredicted RBP10.31□□□□□ -0.76
POLR2J3-201ENST00000379340 PTBP2Q9UKA9 531 aaKnown RBP10.31□□□□□ -0.76
POLR2J3-201ENST00000379340 SLC8A2Q9UPR5 921 aa10.31□□□□□ -0.76
POLR2J3-201ENST00000379340 CCL26Q9Y258 94 aa10.31□□□□□ -0.76
POLR2J3-201ENST00000379340 PRSS21Q9Y6M0 314 aa10.31□□□□□ -0.76
POLR2J3-201ENST00000379340 ZFHX2Q9C0A1 2572 aaPredicted RBP10.31□□□□□ -0.76
POLR2J3-201ENST00000379340 SPTBN4Q9H254 2564 aa10.31□□□□□ -0.76
POLR2J3-201ENST00000379340 IGLV3-16A0A075B6K0 115 aa10.31□□□□□ -0.76
POLR2J3-201ENST00000379340 A0A0U1RQS6 177 aa10.31□□□□□ -0.76
POLR2J3-201ENST00000379340 TSPAN11A1L157 253 aa10.31□□□□□ -0.76
POLR2J3-201ENST00000379340 LINC01553A4QN01 128 aa10.31□□□□□ -0.76
POLR2J3-201ENST00000379340 C5orf67F2Z3F1 127 aa10.31□□□□□ -0.76
POLR2J3-201ENST00000379340 NR5A2O00482 541 aa10.31□□□□□ -0.76
POLR2J3-201ENST00000379340 NRG2O14511 850 aaPredicted RBP10.31□□□□□ -0.76
POLR2J3-201ENST00000379340 KPNA5O15131 536 aa10.31□□□□□ -0.76
POLR2J3-201ENST00000379340 GPR39O43194 453 aa10.31□□□□□ -0.76
POLR2J3-201ENST00000379340 WDR47O94967 919 aa10.31□□□□□ -0.76
POLR2J3-201ENST00000379340 OR4F21O95013 312 aa10.31□□□□□ -0.76
POLR2J3-201ENST00000379340 TRIM16O95361 564 aa10.31□□□□□ -0.76
POLR2J3-201ENST00000379340 ASLP04424 464 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms