RNA–Protein interactions for RNA: ENST00000377340.6

CRNKL1-202, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-202ENST00000377340 IL12RB1P42701 662 aa8.35□□□□□ -1.07
CRNKL1-202ENST00000377340 GDF5P43026 501 aa8.35□□□□□ -1.07
CRNKL1-202ENST00000377340 CENPAP49450 140 aa8.35□□□□□ -1.07
CRNKL1-202ENST00000377340 RAB41Q5JT25 222 aa8.35□□□□□ -1.07
CRNKL1-202ENST00000377340 TMEM164Q5U3C3 297 aa8.35□□□□□ -1.07
CRNKL1-202ENST00000377340 ZNF783Q6ZMS7 281 aa8.35□□□□□ -1.07
CRNKL1-202ENST00000377340 RIPOR1Q6ZS17 1223 aa8.35□□□□□ -1.07
CRNKL1-202ENST00000377340 TRABD2AQ86V40 505 aa8.35□□□□□ -1.07
CRNKL1-202ENST00000377340 FSTL5Q8N475 847 aaPredicted RBP8.35□□□□□ -1.07
CRNKL1-202ENST00000377340 PIWIL2Q8TC59 973 aaKnown RBP8.35□□□□□ -1.07
CRNKL1-202ENST00000377340 RELTQ969Z4 430 aa8.35□□□□□ -1.07
CRNKL1-202ENST00000377340 CDX2Q99626 313 aaPredicted RBP8.35□□□□□ -1.07
CRNKL1-202ENST00000377340 IL21RQ9HBE5 538 aa8.35□□□□□ -1.07
CRNKL1-202ENST00000377340 USP29Q9HBJ7 922 aa8.35□□□□□ -1.07
CRNKL1-202ENST00000377340 TMEM216Q9P0N5 145 aa8.35□□□□□ -1.07
CRNKL1-202ENST00000377340 TTC3P53804 2025 aa8.35□□□□□ -1.07
CRNKL1-202ENST00000377340 LATS1O95835 1130 aa8.34□□□□□ -1.07
CRNKL1-202ENST00000377340 OAS1P00973 400 aaKnown RBP8.34□□□□□ -1.07
CRNKL1-202ENST00000377340 SRPRAP08240 638 aaKnown RBP8.34□□□□□ -1.07
CRNKL1-202ENST00000377340 THRAP10827 490 aa8.34□□□□□ -1.07
CRNKL1-202ENST00000377340 LBPP18428 481 aa8.34□□□□□ -1.07
CRNKL1-202ENST00000377340 HOXD9P28356 352 aaPredicted RBP8.34□□□□□ -1.07
CRNKL1-202ENST00000377340 PLOD1Q02809 727 aaPredicted RBP8.34□□□□□ -1.07
CRNKL1-202ENST00000377340 HYAL1Q12794 435 aa8.34□□□□□ -1.07
CRNKL1-202ENST00000377340 ILF2Q12905 390 aaKnown RBP8.34□□□□□ -1.07
CRNKL1-202ENST00000377340 DGKKQ5KSL6 1271 aa8.34□□□□□ -1.07
CRNKL1-202ENST00000377340 ATAD3BQ5T9A4 648 aa8.34□□□□□ -1.07
CRNKL1-202ENST00000377340 CLEC6AQ6EIG7 209 aa8.34□□□□□ -1.07
CRNKL1-202ENST00000377340 PAGE2Q7Z2X7 111 aa8.34□□□□□ -1.07
CRNKL1-202ENST00000377340 KCNV2Q8TDN2 545 aa8.34□□□□□ -1.07
CRNKL1-202ENST00000377340 ACMSDQ8TDX5 336 aa8.34□□□□□ -1.07
CRNKL1-202ENST00000377340 FGF14Q92915 247 aa8.34□□□□□ -1.07
CRNKL1-202ENST00000377340 FOXJ1Q92949 421 aa8.34□□□□□ -1.07
CRNKL1-202ENST00000377340 LRIG1Q96JA1 1093 aa8.34□□□□□ -1.07
CRNKL1-202ENST00000377340 HIC2Q96JB3 615 aa8.34□□□□□ -1.07
CRNKL1-202ENST00000377340 MRGPRX2Q96LB1 330 aa8.34□□□□□ -1.07
CRNKL1-202ENST00000377340 TDRD1Q9BXT4 1180 aaKnown RBP8.34□□□□□ -1.07
CRNKL1-202ENST00000377340 EXO5Q9H790 373 aa8.34□□□□□ -1.07
CRNKL1-202ENST00000377340 TBC1D17Q9HA65 648 aa8.34□□□□□ -1.07
CRNKL1-202ENST00000377340 SUSD2Q9UGT4 822 aa8.34□□□□□ -1.07
CRNKL1-202ENST00000377340 FBXW2Q9UKT8 454 aa8.34□□□□□ -1.07
CRNKL1-202ENST00000377340 MRPS33Q9Y291 106 aaKnown RBP8.34□□□□□ -1.07
CRNKL1-202ENST00000377340 FER1L6Q2WGJ9 1857 aa8.34□□□□□ -1.07
CRNKL1-202ENST00000377340 LAMA4Q16363 1823 aa8.34□□□□□ -1.07
CRNKL1-202ENST00000377340 ZNF217O75362 1048 aa8.34□□□□□ -1.07
CRNKL1-202ENST00000377340 IPO13O94829 963 aaKnown RBP8.34□□□□□ -1.07
CRNKL1-202ENST00000377340 SIX3O95343 332 aaPredicted RBP8.34□□□□□ -1.07
CRNKL1-202ENST00000377340 BMP10O95393 424 aa8.34□□□□□ -1.07
CRNKL1-202ENST00000377340 POLR2CP19387 275 aaPredicted RBP8.34□□□□□ -1.07
CRNKL1-202ENST00000377340 EFNA1P20827 205 aaPredicted RBP8.34□□□□□ -1.07
CRNKL1-202ENST00000377340 CCR2P41597 374 aa8.34□□□□□ -1.07
CRNKL1-202ENST00000377340 ANXA11P50995 505 aaKnown RBP8.34□□□□□ -1.07
CRNKL1-202ENST00000377340 ALDH6A1Q02252 535 aaKnown RBP8.34□□□□□ -1.07
CRNKL1-202ENST00000377340 AASDHQ4L235 1098 aaPredicted RBP8.34□□□□□ -1.07
CRNKL1-202ENST00000377340 FAAH2Q6GMR7 532 aa8.34□□□□□ -1.07
CRNKL1-202ENST00000377340 NADSYN1Q6IA69 706 aa8.34□□□□□ -1.07
CRNKL1-202ENST00000377340 ARCQ7LC44 396 aa8.34□□□□□ -1.07
CRNKL1-202ENST00000377340 NXPE1Q8N323 547 aa8.34□□□□□ -1.07
CRNKL1-202ENST00000377340 TMEM132CQ8N3T6 1108 aa8.34□□□□□ -1.07
CRNKL1-202ENST00000377340 KCT2Q8NC54 265 aa8.34□□□□□ -1.07
CRNKL1-202ENST00000377340 GLYATL1Q969I3 302 aa8.34□□□□□ -1.07
CRNKL1-202ENST00000377340 NSL1Q96IY1 281 aa8.34□□□□□ -1.07
CRNKL1-202ENST00000377340 WDR92Q96MX6 357 aa8.34□□□□□ -1.07
CRNKL1-202ENST00000377340 ING2Q9H160 280 aa8.34□□□□□ -1.07
CRNKL1-202ENST00000377340 EIF2B3Q9NR50 452 aaKnown RBP8.34□□□□□ -1.07
CRNKL1-202ENST00000377340 TET1Q8NFU7 2136 aa8.34□□□□□ -1.07
CRNKL1-202ENST00000377340 C9JVG2 144 aa8.34□□□□□ -1.07
CRNKL1-202ENST00000377340 TNFRSF10BO14763 440 aa8.34□□□□□ -1.07
CRNKL1-202ENST00000377340 EPOP01588 193 aa8.34□□□□□ -1.07
CRNKL1-202ENST00000377340 CREB1P16220 341 aa8.34□□□□□ -1.07
CRNKL1-202ENST00000377340 OGNP20774 298 aaKnown RBP8.34□□□□□ -1.07
CRNKL1-202ENST00000377340 PPP2R1BP30154 601 aa8.34□□□□□ -1.07
CRNKL1-202ENST00000377340 NTSP30990 170 aa8.34□□□□□ -1.07
CRNKL1-202ENST00000377340 CSTF2P33240 577 aaKnown RBP eCLIP8.34□□□□□ -1.07
CRNKL1-202ENST00000377340 BDKRB1P46663 353 aa8.34□□□□□ -1.07
CRNKL1-202ENST00000377340 SGSHP51688 502 aa8.34□□□□□ -1.07
CRNKL1-202ENST00000377340 NRG1Q02297 640 aaPredicted RBP8.34□□□□□ -1.07
CRNKL1-202ENST00000377340 MLF2Q15773 248 aaPredicted RBP8.34□□□□□ -1.07
CRNKL1-202ENST00000377340 CYP1B1Q16678 543 aa8.34□□□□□ -1.07
CRNKL1-202ENST00000377340 ATP13A5Q4VNC0 1218 aa8.34□□□□□ -1.07
CRNKL1-202ENST00000377340 PKDCCQ504Y2 493 aa8.34□□□□□ -1.07
CRNKL1-202ENST00000377340 LIPMQ5VYY2 423 aa8.34□□□□□ -1.07
CRNKL1-202ENST00000377340 RASGRP3Q8IV61 690 aa8.34□□□□□ -1.07
CRNKL1-202ENST00000377340 RAB7BQ96AH8 199 aa8.34□□□□□ -1.07
CRNKL1-202ENST00000377340 MIPEPQ99797 713 aa8.34□□□□□ -1.07
CRNKL1-202ENST00000377340 CCM2Q9BSQ5 444 aa8.34□□□□□ -1.07
CRNKL1-202ENST00000377340 FAIM2Q9BWQ8 316 aa8.34□□□□□ -1.07
CRNKL1-202ENST00000377340 TTLL2Q9BWV7 592 aa8.34□□□□□ -1.07
CRNKL1-202ENST00000377340 Q9H521 79 aa8.34□□□□□ -1.07
CRNKL1-202ENST00000377340 WDR55Q9H6Y2 383 aaPredicted RBP8.34□□□□□ -1.07
CRNKL1-202ENST00000377340 EQTNQ9NQ60 294 aa8.34□□□□□ -1.07
CRNKL1-202ENST00000377340 PACSIN3Q9UKS6 424 aa8.34□□□□□ -1.07
CRNKL1-202ENST00000377340 ZNF490Q9ULM2 529 aaPredicted RBP8.34□□□□□ -1.07
CRNKL1-202ENST00000377340 PPM1HQ9ULR3 514 aa8.34□□□□□ -1.07
CRNKL1-202ENST00000377340 NDUFAF1Q9Y375 327 aa8.34□□□□□ -1.07
CRNKL1-202ENST00000377340 MTF2Q9Y483 593 aaPredicted RBP8.34□□□□□ -1.07
CRNKL1-202ENST00000377340 TTC36A6NLP5 189 aa8.34□□□□□ -1.08
CRNKL1-202ENST00000377340 KMOO15229 486 aa8.34□□□□□ -1.08
CRNKL1-202ENST00000377340 LILRB3O75022 631 aa8.34□□□□□ -1.08
CRNKL1-202ENST00000377340 ZMPSTE24O75844 475 aa8.34□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms