RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 ILF2Q12905 390 aaKnown RBP12.77□□□□□ -0.37
MSH5-204ENST00000375755 NFYCQ13952 458 aa12.77□□□□□ -0.37
MSH5-204ENST00000375755 HIST2H2ACQ16777 129 aaPredicted RBP12.77□□□□□ -0.37
MSH5-204ENST00000375755 ZNF789Q5FWF6 425 aa12.77□□□□□ -0.37
MSH5-204ENST00000375755 ZNF470Q6ECI4 717 aa12.77□□□□□ -0.37
MSH5-204ENST00000375755 RIMKLAQ8IXN7 391 aa12.77□□□□□ -0.37
MSH5-204ENST00000375755 LGI2Q8N0V4 545 aa12.77□□□□□ -0.37
MSH5-204ENST00000375755 CLSTN3Q9BQT9 956 aa12.77□□□□□ -0.37
MSH5-204ENST00000375755 CEP44Q9C0F1 390 aa12.77□□□□□ -0.37
MSH5-204ENST00000375755 MPP6Q9NZW5 540 aa12.77□□□□□ -0.37
MSH5-204ENST00000375755 SLCO3A1Q9UIG8 710 aa12.77□□□□□ -0.37
MSH5-204ENST00000375755 TIMM22Q9Y584 194 aa12.77□□□□□ -0.37
MSH5-204ENST00000375755 ASPDHA6ND91 283 aa12.76□□□□□ -0.37
MSH5-204ENST00000375755 PTGES3LE9PB15 166 aa12.76□□□□□ -0.37
MSH5-204ENST00000375755 ADAM12O43184 909 aa12.76□□□□□ -0.37
MSH5-204ENST00000375755 PAGE1O75459 146 aa12.76□□□□□ -0.37
MSH5-204ENST00000375755 JCHAINP01591 159 aa12.76□□□□□ -0.37
MSH5-204ENST00000375755 IGLV3-25P01717 112 aa12.76□□□□□ -0.37
MSH5-204ENST00000375755 PCNAP12004 261 aa12.76□□□□□ -0.37
MSH5-204ENST00000375755 PIGAP37287 484 aa12.76□□□□□ -0.37
MSH5-204ENST00000375755 ARPC4P59998 168 aa12.76□□□□□ -0.37
MSH5-204ENST00000375755 CD47Q08722 323 aa12.76□□□□□ -0.37
MSH5-204ENST00000375755 EIF4EBP2Q13542 120 aaPredicted RBP12.76□□□□□ -0.37
MSH5-204ENST00000375755 LINC00299Q6ZSB3 139 aa12.76□□□□□ -0.37
MSH5-204ENST00000375755 RBM23Q86U06 439 aaKnown RBP12.76□□□□□ -0.37
MSH5-204ENST00000375755 PHYKPLQ8IUZ5 450 aa12.76□□□□□ -0.37
MSH5-204ENST00000375755 DCP1BQ8IZD4 617 aaKnown RBP12.76□□□□□ -0.37
MSH5-204ENST00000375755 TRIM54Q9BYV2 358 aa12.76□□□□□ -0.37
MSH5-204ENST00000375755 TRIT1Q9H3H1 467 aaKnown RBP12.76□□□□□ -0.37
MSH5-204ENST00000375755 FAM118AQ9NWS6 357 aa12.76□□□□□ -0.37
MSH5-204ENST00000375755 COL4A4P53420 1690 aaPredicted RBP12.76□□□□□ -0.37
MSH5-204ENST00000375755 TBKBP1A7MCY6 615 aa12.76□□□□□ -0.37
MSH5-204ENST00000375755 PIP5K1BO14986 540 aa12.76□□□□□ -0.37
MSH5-204ENST00000375755 FSHRP23945 695 aa12.76□□□□□ -0.37
MSH5-204ENST00000375755 TUFMP49411 452 aaKnown RBP12.76□□□□□ -0.37
MSH5-204ENST00000375755 TPD52P55327 224 aaPredicted RBP12.76□□□□□ -0.37
MSH5-204ENST00000375755 VBP1P61758 197 aa12.76□□□□□ -0.37
MSH5-204ENST00000375755 SH3BP2P78314 561 aa12.76□□□□□ -0.37
MSH5-204ENST00000375755 CDC20Q12834 499 aa12.76□□□□□ -0.37
MSH5-204ENST00000375755 PAGE3Q5JUK9 113 aa12.76□□□□□ -0.37
MSH5-204ENST00000375755 PCID2Q5JVF3 399 aa12.76□□□□□ -0.37
MSH5-204ENST00000375755 ANKRD34AQ69YU3 496 aa12.76□□□□□ -0.37
MSH5-204ENST00000375755 NAPEPLDQ6IQ20 393 aa12.76□□□□□ -0.37
MSH5-204ENST00000375755 ADCK1Q86TW2 530 aa12.76□□□□□ -0.37
MSH5-204ENST00000375755 SPATA22Q8NHS9 363 aa12.76□□□□□ -0.37
MSH5-204ENST00000375755 PSMA8Q8TAA3 256 aa12.76□□□□□ -0.37
MSH5-204ENST00000375755 ANKRD49Q8WVL7 239 aa12.76□□□□□ -0.37
MSH5-204ENST00000375755 GLMNQ92990 594 aa12.76□□□□□ -0.37
MSH5-204ENST00000375755 MBOAT4Q96T53 435 aa12.76□□□□□ -0.37
MSH5-204ENST00000375755 SLC9A7Q96T83 725 aa12.76□□□□□ -0.37
MSH5-204ENST00000375755 AMBRA1Q9C0C7 1298 aa12.76□□□□□ -0.37
MSH5-204ENST00000375755 CCDC90BQ9GZT6 254 aa12.76□□□□□ -0.37
MSH5-204ENST00000375755 RNF208Q9H0X6 261 aa12.76□□□□□ -0.37
MSH5-204ENST00000375755 MUC13Q9H3R2 512 aa12.76□□□□□ -0.37
MSH5-204ENST00000375755 SMURF2Q9HAU4 748 aa12.76□□□□□ -0.37
MSH5-204ENST00000375755 SLAMF8Q9P0V8 285 aa12.76□□□□□ -0.37
MSH5-204ENST00000375755 SNX5Q9Y5X3 404 aa12.76□□□□□ -0.37
MSH5-204ENST00000375755 UNC80Q8N2C7 3258 aa12.76□□□□□ -0.37
MSH5-204ENST00000375755 NYNRINQ9P2P1 1898 aaKnown RBP12.76□□□□□ -0.37
MSH5-204ENST00000375755 ILVBLA1L0T0 632 aa12.75□□□□□ -0.37
MSH5-204ENST00000375755 ZNF99A8MXY4 864 aaPredicted RBP12.75□□□□□ -0.37
MSH5-204ENST00000375755 TTC34A8MYJ7 566 aa12.75□□□□□ -0.37
MSH5-204ENST00000375755 RGS13O14921 159 aa12.75□□□□□ -0.37
MSH5-204ENST00000375755 IRAK2O43187 625 aa12.75□□□□□ -0.37
MSH5-204ENST00000375755 KCNK2O95069 426 aa12.75□□□□□ -0.37
MSH5-204ENST00000375755 KRT75O95678 551 aa12.75□□□□□ -0.37
MSH5-204ENST00000375755 LTA4HP09960 611 aaKnown RBP12.75□□□□□ -0.37
MSH5-204ENST00000375755 IMPDH1P20839 514 aa12.75□□□□□ -0.37
MSH5-204ENST00000375755 IST1P53990 364 aa12.75□□□□□ -0.37
MSH5-204ENST00000375755 FOXA1P55317 472 aa12.75□□□□□ -0.37
MSH5-204ENST00000375755 OR4D2P58180 307 aa12.75□□□□□ -0.37
MSH5-204ENST00000375755 GABARAPL2P60520 117 aa12.75□□□□□ -0.37
MSH5-204ENST00000375755 POU4F1Q01851 419 aa12.75□□□□□ -0.37
MSH5-204ENST00000375755 FOXM1Q08050 763 aa12.75□□□□□ -0.37
MSH5-204ENST00000375755 DGUOKQ16854 277 aa12.75□□□□□ -0.37
MSH5-204ENST00000375755 UNC50Q53HI1 259 aa12.75□□□□□ -0.37
MSH5-204ENST00000375755 AGAP9Q5VTM2 703 aa12.75□□□□□ -0.37
MSH5-204ENST00000375755 BLOC1S3Q6QNY0 202 aa12.75□□□□□ -0.37
MSH5-204ENST00000375755 GALNT13Q8IUC8 556 aa12.75□□□□□ -0.37
MSH5-204ENST00000375755 KIAA2013Q8IYS2 634 aa12.75□□□□□ -0.37
MSH5-204ENST00000375755 C2CD4AQ8NCU7 369 aaPredicted RBP12.75□□□□□ -0.37
MSH5-204ENST00000375755 SDCCAG3Q96C92 435 aa12.75□□□□□ -0.37
MSH5-204ENST00000375755 NODALQ96S42 347 aa12.75□□□□□ -0.37
MSH5-204ENST00000375755 EXD2Q9NVH0 621 aa12.75□□□□□ -0.37
MSH5-204ENST00000375755 FBXO5Q9UKT4 447 aa12.75□□□□□ -0.37
MSH5-204ENST00000375755 FNDC1Q4ZHG4 1894 aaPredicted RBP12.75□□□□□ -0.37
MSH5-204ENST00000375755 ANKRD12Q6UB98 2062 aa12.75□□□□□ -0.37
MSH5-204ENST00000375755 DFFAO00273 331 aa12.75□□□□□ -0.37
MSH5-204ENST00000375755 HMBSP08397 361 aa12.75□□□□□ -0.37
MSH5-204ENST00000375755 ZNF678Q5SXM1 525 aa12.75□□□□□ -0.37
MSH5-204ENST00000375755 PRR23BQ6ZRT6 265 aa12.75□□□□□ -0.37
MSH5-204ENST00000375755 CLYBLQ8N0X4 340 aa12.75□□□□□ -0.37
MSH5-204ENST00000375755 OR13J1Q8NGT2 312 aa12.75□□□□□ -0.37
MSH5-204ENST00000375755 GIPC2Q8TF65 315 aa12.75□□□□□ -0.37
MSH5-204ENST00000375755 FAR1Q8WVX9 515 aa12.75□□□□□ -0.37
MSH5-204ENST00000375755 TEX37Q96LM6 180 aa12.75□□□□□ -0.37
MSH5-204ENST00000375755 TEKT5Q96M29 485 aa12.75□□□□□ -0.37
MSH5-204ENST00000375755 SDR39U1Q9NRG7 319 aaPredicted RBP12.75□□□□□ -0.37
MSH5-204ENST00000375755 ABCB10Q9NRK6 738 aa12.75□□□□□ -0.37
MSH5-204ENST00000375755 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms