RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 TBL1YQ9BQ87 522 aa11.98□□□□□ -0.49
LSM2-208ENST00000375661 LRRC40Q9H9A6 602 aa11.98□□□□□ -0.49
LSM2-208ENST00000375661 ARNT2Q9HBZ2 717 aa11.98□□□□□ -0.49
LSM2-208ENST00000375661 LRRC4CQ9HCJ2 640 aa11.98□□□□□ -0.49
LSM2-208ENST00000375661 PCDHB3Q9Y5E6 796 aa11.98□□□□□ -0.49
LSM2-208ENST00000375661 KCNMB2Q9Y691 235 aa11.98□□□□□ -0.49
LSM2-208ENST00000375661 LRRK2Q5S007 2527 aa11.98□□□□□ -0.49
LSM2-208ENST00000375661 NBASA2RRP1 2371 aa11.97□□□□□ -0.49
LSM2-208ENST00000375661 TCRBV7S3A2A0A539 114 aa11.97□□□□□ -0.49
LSM2-208ENST00000375661 BLACEA4D250 179 aa11.97□□□□□ -0.49
LSM2-208ENST00000375661 A8MU76 341 aa11.97□□□□□ -0.49
LSM2-208ENST00000375661 ESPNB1AK53 854 aa11.97□□□□□ -0.49
LSM2-208ENST00000375661 MKRN2OSH3BPM6 223 aa11.97□□□□□ -0.49
LSM2-208ENST00000375661 AURKAO14965 403 aa11.97□□□□□ -0.49
LSM2-208ENST00000375661 POLR1CO15160 346 aaPredicted RBP11.97□□□□□ -0.49
LSM2-208ENST00000375661 SUN1O94901 812 aa11.97□□□□□ -0.49
LSM2-208ENST00000375661 CLDN7O95471 211 aa11.97□□□□□ -0.49
LSM2-208ENST00000375661 RECKO95980 971 aa11.97□□□□□ -0.49
LSM2-208ENST00000375661 SOD1P00441 154 aa11.97□□□□□ -0.49
LSM2-208ENST00000375661 ANKRD34CP0C6C1 535 aa11.97□□□□□ -0.49
LSM2-208ENST00000375661 ZNF30P17039 623 aa11.97□□□□□ -0.49
LSM2-208ENST00000375661 GRIA1P42261 906 aa11.97□□□□□ -0.49
LSM2-208ENST00000375661 PPM1FP49593 454 aaPredicted RBP11.97□□□□□ -0.49
LSM2-208ENST00000375661 MRPS25P82663 173 aaKnown RBP11.97□□□□□ -0.49
LSM2-208ENST00000375661 PTSQ03393 145 aa11.97□□□□□ -0.49
LSM2-208ENST00000375661 GPS1Q13098 491 aa11.97□□□□□ -0.49
LSM2-208ENST00000375661 PTK6Q13882 451 aa11.97□□□□□ -0.49
LSM2-208ENST00000375661 SNAP47Q5SQN1 464 aa11.97□□□□□ -0.49
LSM2-208ENST00000375661 LRRC66Q68CR7 880 aa11.97□□□□□ -0.49
LSM2-208ENST00000375661 CCDC70Q6NSX1 233 aa11.97□□□□□ -0.49
LSM2-208ENST00000375661 TCTN3Q6NUS6 607 aa11.97□□□□□ -0.49
LSM2-208ENST00000375661 DOK6Q6PKX4 331 aa11.97□□□□□ -0.49
LSM2-208ENST00000375661 RFLNAQ6ZTI6 216 aa11.97□□□□□ -0.49
LSM2-208ENST00000375661 TMC3Q7Z5M5 1100 aa11.97□□□□□ -0.49
LSM2-208ENST00000375661 SLC9B2Q86UD5 537 aa11.97□□□□□ -0.49
LSM2-208ENST00000375661 AP2M1Q96CW1 435 aa11.97□□□□□ -0.49
LSM2-208ENST00000375661 EID2BQ96D98 161 aa11.97□□□□□ -0.49
LSM2-208ENST00000375661 RUNDC3BQ96NL0 473 aa11.97□□□□□ -0.49
LSM2-208ENST00000375661 CTRCQ99895 268 aa11.97□□□□□ -0.49
LSM2-208ENST00000375661 FSD1LQ9BXM9 530 aa11.97□□□□□ -0.49
LSM2-208ENST00000375661 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.97□□□□□ -0.49
LSM2-208ENST00000375661 ABCG8Q9H221 673 aa11.97□□□□□ -0.49
LSM2-208ENST00000375661 MAGEE1Q9HCI5 957 aa11.97□□□□□ -0.49
LSM2-208ENST00000375661 PLAAQ9Y263 795 aa11.97□□□□□ -0.49
LSM2-208ENST00000375661 TP53TG5Q9Y2B4 290 aa11.97□□□□□ -0.49
LSM2-208ENST00000375661 PLEKHM1Q9Y4G2 1056 aa11.97□□□□□ -0.49
LSM2-208ENST00000375661 RELNP78509 3460 aa11.96□□□□□ -0.49
LSM2-208ENST00000375661 OR5K4A6NMS3 321 aa11.96□□□□□ -0.49
LSM2-208ENST00000375661 ERI2A8K979 691 aaKnown RBP11.96□□□□□ -0.49
LSM2-208ENST00000375661 E7EVH7 732 aa11.96□□□□□ -0.49
LSM2-208ENST00000375661 TTI1O43156 1089 aa11.96□□□□□ -0.49
LSM2-208ENST00000375661 GAS8O95995 478 aa11.96□□□□□ -0.49
LSM2-208ENST00000375661 IVDP26440 423 aa11.96□□□□□ -0.49
LSM2-208ENST00000375661 MAGEA6P43360 314 aa11.96□□□□□ -0.49
LSM2-208ENST00000375661 STC1P52823 247 aa11.96□□□□□ -0.49
LSM2-208ENST00000375661 BASP1P80723 227 aaKnown RBP11.96□□□□□ -0.49
LSM2-208ENST00000375661 DR1Q01658 176 aa11.96□□□□□ -0.49
LSM2-208ENST00000375661 CKAP4Q07065 602 aaKnown RBP11.96□□□□□ -0.49
LSM2-208ENST00000375661 TUBB2AQ13885 445 aa11.96□□□□□ -0.49
LSM2-208ENST00000375661 KCNJ11Q14654 390 aa11.96□□□□□ -0.49
LSM2-208ENST00000375661 ANKRD22Q5VYY1 191 aa11.96□□□□□ -0.49
LSM2-208ENST00000375661 C16orf46Q6P387 395 aa11.96□□□□□ -0.49
LSM2-208ENST00000375661 LYSMD3Q7Z3D4 306 aa11.96□□□□□ -0.49
LSM2-208ENST00000375661 ZNF761Q86XN6 746 aaPredicted RBP11.96□□□□□ -0.49
LSM2-208ENST00000375661 PLXDC1Q8IUK5 500 aa11.96□□□□□ -0.49
LSM2-208ENST00000375661 UNC5BQ8IZJ1 945 aa11.96□□□□□ -0.49
LSM2-208ENST00000375661 TTC30BQ8N4P2 665 aa11.96□□□□□ -0.49
LSM2-208ENST00000375661 TEX19Q8NA77 164 aa11.96□□□□□ -0.49
LSM2-208ENST00000375661 CPT1BQ92523 772 aa11.96□□□□□ -0.49
LSM2-208ENST00000375661 NCSTNQ92542 709 aa11.96□□□□□ -0.49
LSM2-208ENST00000375661 COX14Q96I36 57 aa11.96□□□□□ -0.49
LSM2-208ENST00000375661 TUBB2BQ9BVA1 445 aa11.96□□□□□ -0.49
LSM2-208ENST00000375661 RMI1Q9H9A7 625 aa11.96□□□□□ -0.49
LSM2-208ENST00000375661 APMAPQ9HDC9 416 aa11.96□□□□□ -0.49
LSM2-208ENST00000375661 EIF2B3Q9NR50 452 aaKnown RBP11.96□□□□□ -0.49
LSM2-208ENST00000375661 VPS18Q9P253 973 aa11.96□□□□□ -0.49
LSM2-208ENST00000375661 SHOC2Q9UQ13 582 aa11.96□□□□□ -0.49
LSM2-208ENST00000375661 TMEM98Q9Y2Y6 226 aa11.96□□□□□ -0.49
LSM2-208ENST00000375661 ZNF711Q9Y462 761 aa11.96□□□□□ -0.49
LSM2-208ENST00000375661 RPS6KL1Q9Y6S9 549 aa11.96□□□□□ -0.49
LSM2-208ENST00000375661 USP9YO00507 2555 aaPredicted RBP11.95□□□□□ -0.5
LSM2-208ENST00000375661 MN1Q10571 1320 aaPredicted RBP11.95□□□□□ -0.5
LSM2-208ENST00000375661 KIR2DS5A0A0G2JLQ3 304 aa11.95□□□□□ -0.5
LSM2-208ENST00000375661 A0A0G2JNG1 304 aa11.95□□□□□ -0.5
LSM2-208ENST00000375661 C1orf232A0A0U1RR37 186 aa11.95□□□□□ -0.5
LSM2-208ENST00000375661 KIR2DS3K7RE56 304 aa11.95□□□□□ -0.5
LSM2-208ENST00000375661 RAD51CO43502 376 aa11.95□□□□□ -0.5
LSM2-208ENST00000375661 APRTP07741 180 aa11.95□□□□□ -0.5
LSM2-208ENST00000375661 TPH1P17752 444 aa11.95□□□□□ -0.5
LSM2-208ENST00000375661 TPSB2P20231 275 aa11.95□□□□□ -0.5
LSM2-208ENST00000375661 TNNT3P45378 269 aaPredicted RBP11.95□□□□□ -0.5
LSM2-208ENST00000375661 LMAN1P49257 510 aa11.95□□□□□ -0.5
LSM2-208ENST00000375661 TERF1P54274 439 aa11.95□□□□□ -0.5
LSM2-208ENST00000375661 DHX34Q14147 1143 aaKnown RBP11.95□□□□□ -0.5
LSM2-208ENST00000375661 KIR2DS5Q14953 304 aa11.95□□□□□ -0.5
LSM2-208ENST00000375661 PPP1R7Q15435 360 aa11.95□□□□□ -0.5
LSM2-208ENST00000375661 TPSAB1Q15661 275 aa11.95□□□□□ -0.5
LSM2-208ENST00000375661 IYDQ6PHW0 289 aa11.95□□□□□ -0.5
LSM2-208ENST00000375661 SYDE1Q6ZW31 735 aaPredicted RBP11.95□□□□□ -0.5
LSM2-208ENST00000375661 ZNF534Q76KX8 674 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms