RNA–Protein interactions for RNA: ENST00000375299.7

UPF3A-202, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3A, Length 2,387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-202ENST00000375299 ODC1P11926 461 aa20.87■□□□□ 0.93
UPF3A-202ENST00000375299 AGAP7PQ5VUJ5 663 aa20.87■□□□□ 0.93
UPF3A-202ENST00000375299 ENPP6Q6UWR7 440 aa20.87■□□□□ 0.93
UPF3A-202ENST00000375299 NECAB2Q7Z6G3 386 aa20.87■□□□□ 0.93
UPF3A-202ENST00000375299 SCD5Q86SK9 330 aa20.87■□□□□ 0.93
UPF3A-202ENST00000375299 FIG4Q92562 907 aa20.87■□□□□ 0.93
UPF3A-202ENST00000375299 C1orf74Q96LT6 269 aa20.87■□□□□ 0.93
UPF3A-202ENST00000375299 ZNF583Q96ND8 569 aa20.87■□□□□ 0.93
UPF3A-202ENST00000375299 BCL7BQ9BQE9 202 aa20.87■□□□□ 0.93
UPF3A-202ENST00000375299 PAAF1Q9BRP4 392 aa20.87■□□□□ 0.93
UPF3A-202ENST00000375299 GORASP2Q9H8Y8 452 aa20.87■□□□□ 0.93
UPF3A-202ENST00000375299 HEBP1Q9NRV9 189 aa20.87■□□□□ 0.93
UPF3A-202ENST00000375299 PAK1IP1Q9NWT1 392 aaPredicted RBP20.87■□□□□ 0.93
UPF3A-202ENST00000375299 DNMT3BQ9UBC3 853 aaKnown RBP20.87■□□□□ 0.93
UPF3A-202ENST00000375299 GALPQ9UBC7 116 aa20.87■□□□□ 0.93
UPF3A-202ENST00000375299 NEUROG3Q9Y4Z2 214 aa20.87■□□□□ 0.93
UPF3A-202ENST00000375299 TOR1BO14657 336 aa20.87■□□□□ 0.93
UPF3A-202ENST00000375299 OR4F21O95013 312 aa20.87■□□□□ 0.93
UPF3A-202ENST00000375299 FGF1P05230 155 aa20.87■□□□□ 0.93
UPF3A-202ENST00000375299 RHOQP17081 205 aa20.87■□□□□ 0.93
UPF3A-202ENST00000375299 HLA-DPA1P20036 260 aa20.87■□□□□ 0.93
UPF3A-202ENST00000375299 TGM1P22735 817 aa20.87■□□□□ 0.93
UPF3A-202ENST00000375299 FMO4P31512 558 aa20.87■□□□□ 0.93
UPF3A-202ENST00000375299 ISL1P61371 349 aa20.87■□□□□ 0.93
UPF3A-202ENST00000375299 IFITM3Q01628 133 aa20.87■□□□□ 0.93
UPF3A-202ENST00000375299 NKG7Q16617 165 aa20.87■□□□□ 0.93
UPF3A-202ENST00000375299 Q6ZSR9 355 aa20.87■□□□□ 0.93
UPF3A-202ENST00000375299 OR7A2PQ8NGA2 310 aa20.87■□□□□ 0.93
UPF3A-202ENST00000375299 OR8J3Q8NGG0 315 aa20.87■□□□□ 0.93
UPF3A-202ENST00000375299 BRI3BPQ8WY22 251 aa20.87■□□□□ 0.93
UPF3A-202ENST00000375299 ATP13A3Q9H7F0 1226 aa20.87■□□□□ 0.93
UPF3A-202ENST00000375299 PRDM5Q9NQX1 630 aaPredicted RBP20.87■□□□□ 0.93
UPF3A-202ENST00000375299 EVLQ9UI08 416 aaPredicted RBP20.87■□□□□ 0.93
UPF3A-202ENST00000375299 NLRC5Q86WI3 1866 aa20.87■□□□□ 0.93
UPF3A-202ENST00000375299 BTN3A1O00481 513 aa20.86■□□□□ 0.93
UPF3A-202ENST00000375299 E2F6O75461 281 aa20.86■□□□□ 0.93
UPF3A-202ENST00000375299 KPNA1P52294 538 aaPredicted RBP20.86■□□□□ 0.93
UPF3A-202ENST00000375299 ANKRD34AQ69YU3 496 aa20.86■□□□□ 0.93
UPF3A-202ENST00000375299 PLEKHH3Q7Z736 793 aa20.86■□□□□ 0.93
UPF3A-202ENST00000375299 FAM126BQ8IXS8 530 aa20.86■□□□□ 0.93
UPF3A-202ENST00000375299 CDYL2Q8N8U2 506 aa20.86■□□□□ 0.93
UPF3A-202ENST00000375299 SLC47A1Q96FL8 570 aa20.86■□□□□ 0.93
UPF3A-202ENST00000375299 SERPINB11Q96P15 392 aa20.86■□□□□ 0.93
UPF3A-202ENST00000375299 PKMYT1Q99640 499 aa20.86■□□□□ 0.93
UPF3A-202ENST00000375299 C17orf80Q9BSJ5 609 aa20.86■□□□□ 0.93
UPF3A-202ENST00000375299 CCDC90BQ9GZT6 254 aa20.86■□□□□ 0.93
UPF3A-202ENST00000375299 TMEM248Q9NWD8 314 aa20.86■□□□□ 0.93
UPF3A-202ENST00000375299 LOC100130705A0A1B0GUX0 176 aa20.86■□□□□ 0.93
UPF3A-202ENST00000375299 GNGT2O14610 69 aa20.86■□□□□ 0.93
UPF3A-202ENST00000375299 GJB3O75712 270 aa20.86■□□□□ 0.93
UPF3A-202ENST00000375299 GSTT2P0CG29 244 aa20.86■□□□□ 0.93
UPF3A-202ENST00000375299 GSTT2BP0CG30 244 aa20.86■□□□□ 0.93
UPF3A-202ENST00000375299 GALNT3Q14435 633 aa20.86■□□□□ 0.93
UPF3A-202ENST00000375299 ZNF691Q5VV52 312 aa20.86■□□□□ 0.93
UPF3A-202ENST00000375299 SNX29P2Q8IUI4 249 aa20.86■□□□□ 0.93
UPF3A-202ENST00000375299 ZNF513Q8N8E2 541 aaPredicted RBP20.86■□□□□ 0.93
UPF3A-202ENST00000375299 OR2T12Q8NG77 320 aa20.86■□□□□ 0.93
UPF3A-202ENST00000375299 BRSK1Q8TDC3 778 aa20.86■□□□□ 0.93
UPF3A-202ENST00000375299 ZYG11BQ9C0D3 744 aa20.86■□□□□ 0.93
UPF3A-202ENST00000375299 ACTL8Q9H568 366 aa20.86■□□□□ 0.93
UPF3A-202ENST00000375299 NMUR1Q9HB89 426 aa20.86■□□□□ 0.93
UPF3A-202ENST00000375299 PTGES3LE9PB15 166 aa20.85■□□□□ 0.93
UPF3A-202ENST00000375299 IFRD1O00458 451 aaPredicted RBP20.85■□□□□ 0.93
UPF3A-202ENST00000375299 GSTA4O15217 222 aa20.85■□□□□ 0.93
UPF3A-202ENST00000375299 SLC22A1O15245 554 aa20.85■□□□□ 0.93
UPF3A-202ENST00000375299 LAPTM5Q13571 262 aa20.85■□□□□ 0.93
UPF3A-202ENST00000375299 ALFQ53S48 1182 aa20.85■□□□□ 0.93
UPF3A-202ENST00000375299 C9orf131Q5VYM1 1079 aa20.85■□□□□ 0.93
UPF3A-202ENST00000375299 SPESP1Q6UW49 350 aa20.85■□□□□ 0.93
UPF3A-202ENST00000375299 LRRTM3Q86VH5 581 aa20.85■□□□□ 0.93
UPF3A-202ENST00000375299 METTL23Q86XA0 190 aa20.85■□□□□ 0.93
UPF3A-202ENST00000375299 ZNF683Q8IZ20 524 aa20.85■□□□□ 0.93
UPF3A-202ENST00000375299 MFSD4AQ8N468 514 aa20.85■□□□□ 0.93
UPF3A-202ENST00000375299 FAR1Q8WVX9 515 aa20.85■□□□□ 0.93
UPF3A-202ENST00000375299 ESAMQ96AP7 390 aa20.85■□□□□ 0.93
UPF3A-202ENST00000375299 ERLEC1Q96DZ1 483 aa20.85■□□□□ 0.93
UPF3A-202ENST00000375299 GPR21Q99679 349 aa20.85■□□□□ 0.93
UPF3A-202ENST00000375299 SEMA3CQ99985 751 aa20.85■□□□□ 0.93
UPF3A-202ENST00000375299 SLX1AQ9BQ83 275 aa20.85■□□□□ 0.93
UPF3A-202ENST00000375299 LIMD1Q9UGP4 676 aa20.85■□□□□ 0.93
UPF3A-202ENST00000375299 C3orf18Q9UK00 162 aa20.85■□□□□ 0.93
UPF3A-202ENST00000375299 HS6ST1O60243 411 aa20.85■□□□□ 0.93
UPF3A-202ENST00000375299 PIRTP0C851 137 aa20.85■□□□□ 0.93
UPF3A-202ENST00000375299 G6PDP11413 515 aa20.85■□□□□ 0.93
UPF3A-202ENST00000375299 DGKQP52824 942 aa20.85■□□□□ 0.93
UPF3A-202ENST00000375299 NKAPQ8N5F7 415 aaKnown RBP20.85■□□□□ 0.93
UPF3A-202ENST00000375299 HPS1Q92902 700 aa20.85■□□□□ 0.93
UPF3A-202ENST00000375299 LPPQ93052 612 aa20.85■□□□□ 0.93
UPF3A-202ENST00000375299 ADGRE2Q9UHX3 823 aa20.85■□□□□ 0.93
UPF3A-202ENST00000375299 EIF2B4Q9UI10 523 aaKnown RBP20.85■□□□□ 0.93
UPF3A-202ENST00000375299 UTS2RQ9UKP6 389 aa20.85■□□□□ 0.93
UPF3A-202ENST00000375299 RIMKLBQ9ULI2 386 aa20.85■□□□□ 0.93
UPF3A-202ENST00000375299 CHRNA1P02708 482 aa20.84■□□□□ 0.93
UPF3A-202ENST00000375299 CCDC159P0C7I6 412 aa20.84■□□□□ 0.93
UPF3A-202ENST00000375299 PSEN2P49810 448 aa20.84■□□□□ 0.93
UPF3A-202ENST00000375299 INAQ16352 499 aa20.84■□□□□ 0.93
UPF3A-202ENST00000375299 CYP20A1Q6UW02 462 aa20.84■□□□□ 0.93
UPF3A-202ENST00000375299 DCBLD1Q8N8Z6 715 aa20.84■□□□□ 0.93
UPF3A-202ENST00000375299 GIPC2Q8TF65 315 aa20.84■□□□□ 0.93
UPF3A-202ENST00000375299 ZNF566Q969W8 418 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms