RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 SAT1P21673 171 aa8.91□□□□□ -0.98
UBR4-201ENST00000375218 STX1AQ16623 288 aa8.91□□□□□ -0.98
UBR4-201ENST00000375218 MFSD14BQ5SR56 506 aa8.91□□□□□ -0.98
UBR4-201ENST00000375218 IL23RQ5VWK5 629 aa8.91□□□□□ -0.98
UBR4-201ENST00000375218 C3orf33Q6P1S2 294 aa8.91□□□□□ -0.98
UBR4-201ENST00000375218 APBB2Q92870 758 aa8.91□□□□□ -0.98
UBR4-201ENST00000375218 ZSCAN10Q96SZ4 725 aaPredicted RBP8.91□□□□□ -0.98
UBR4-201ENST00000375218 ZMYND12Q9H0C1 365 aa8.91□□□□□ -0.98
UBR4-201ENST00000375218 POLR3FQ9H1D9 316 aaPredicted RBP8.91□□□□□ -0.98
UBR4-201ENST00000375218 SLC6A17Q9H1V8 727 aa8.91□□□□□ -0.98
UBR4-201ENST00000375218 TIMMDC1Q9NPL8 285 aa8.91□□□□□ -0.98
UBR4-201ENST00000375218 ZCCHC3Q9NUD5 404 aaKnown RBP8.91□□□□□ -0.98
UBR4-201ENST00000375218 KLHL3Q9UH77 587 aa8.91□□□□□ -0.98
UBR4-201ENST00000375218 POLR3KQ9Y2Y1 108 aaPredicted RBP8.91□□□□□ -0.98
UBR4-201ENST00000375218 ANKRD61A6NGH8 418 aa8.91□□□□□ -0.98
UBR4-201ENST00000375218 WASHC1A8K0Z3 465 aa8.91□□□□□ -0.98
UBR4-201ENST00000375218 WASH3PC4AMC7 463 aa8.91□□□□□ -0.98
UBR4-201ENST00000375218 ST8SIA3O43173 380 aa8.91□□□□□ -0.98
UBR4-201ENST00000375218 ABHD2P08910 425 aa8.91□□□□□ -0.98
UBR4-201ENST00000375218 CNPP09543 421 aaKnown RBP8.91□□□□□ -0.98
UBR4-201ENST00000375218 PEPDP12955 493 aa8.91□□□□□ -0.98
UBR4-201ENST00000375218 TNFRSF1AP19438 455 aa8.91□□□□□ -0.98
UBR4-201ENST00000375218 FGFR3P22607 806 aa8.91□□□□□ -0.98
UBR4-201ENST00000375218 CASP14P31944 242 aa8.91□□□□□ -0.98
UBR4-201ENST00000375218 CSNK1DP48730 415 aa8.91□□□□□ -0.98
UBR4-201ENST00000375218 CDK7P50613 346 aa8.91□□□□□ -0.98
UBR4-201ENST00000375218 HSDL1Q3SXM5 330 aa8.91□□□□□ -0.98
UBR4-201ENST00000375218 TBRG1Q3YBR2 411 aa8.91□□□□□ -0.98
UBR4-201ENST00000375218 DUPD1Q68J44 220 aa8.91□□□□□ -0.98
UBR4-201ENST00000375218 ANO7Q6IWH7 933 aa8.91□□□□□ -0.98
UBR4-201ENST00000375218 WASH2PQ6VEQ5 465 aa8.91□□□□□ -0.98
UBR4-201ENST00000375218 EIF3MQ7L2H7 374 aaKnown RBP8.91□□□□□ -0.98
UBR4-201ENST00000375218 ADAT2Q7Z6V5 191 aaKnown RBP8.91□□□□□ -0.98
UBR4-201ENST00000375218 LZTR1Q8N653 840 aa8.91□□□□□ -0.98
UBR4-201ENST00000375218 SNX29Q8TEQ0 813 aa8.91□□□□□ -0.98
UBR4-201ENST00000375218 DAZAP1Q96EP5 407 aaKnown RBP8.91□□□□□ -0.98
UBR4-201ENST00000375218 FBXL20Q96IG2 436 aa8.91□□□□□ -0.98
UBR4-201ENST00000375218 WDFY2Q96P53 400 aa8.91□□□□□ -0.98
UBR4-201ENST00000375218 SLC25A23Q9BV35 468 aa8.91□□□□□ -0.98
UBR4-201ENST00000375218 SLC12A4Q9UP95 1085 aa8.91□□□□□ -0.98
UBR4-201ENST00000375218 V9GYQ6 96 aa8.91□□□□□ -0.98
UBR4-201ENST00000375218 ZNF541Q9H0D2 1346 aa8.91□□□□□ -0.98
UBR4-201ENST00000375218 BCLAF3A2AJT9 711 aaKnown RBP8.9□□□□□ -0.98
UBR4-201ENST00000375218 FAM171A2A8MVW0 826 aa8.9□□□□□ -0.98
UBR4-201ENST00000375218 KCNK3O14649 394 aa8.9□□□□□ -0.98
UBR4-201ENST00000375218 SPRY1O43609 319 aaPredicted RBP8.9□□□□□ -0.98
UBR4-201ENST00000375218 TOM1L1O75674 476 aa8.9□□□□□ -0.98
UBR4-201ENST00000375218 SERPINI2O75830 405 aa8.9□□□□□ -0.98
UBR4-201ENST00000375218 SORBS2O94875 1100 aaKnown RBP8.9□□□□□ -0.98
UBR4-201ENST00000375218 CALCBP10092 127 aa8.9□□□□□ -0.98
UBR4-201ENST00000375218 THRBP10828 461 aa8.9□□□□□ -0.98
UBR4-201ENST00000375218 BDH1Q02338 343 aa8.9□□□□□ -0.98
UBR4-201ENST00000375218 DSC1Q08554 894 aa8.9□□□□□ -0.98
UBR4-201ENST00000375218 ALKBH6Q3KRA9 238 aa8.9□□□□□ -0.98
UBR4-201ENST00000375218 TMEM119Q4V9L6 283 aa8.9□□□□□ -0.98
UBR4-201ENST00000375218 TRIM61Q5EBN2 209 aa8.9□□□□□ -0.98
UBR4-201ENST00000375218 POC5Q8NA72 575 aa8.9□□□□□ -0.98
UBR4-201ENST00000375218 PNPT1Q8TCS8 783 aaKnown RBP8.9□□□□□ -0.98
UBR4-201ENST00000375218 SAT2Q96F10 170 aaPredicted RBP8.9□□□□□ -0.98
UBR4-201ENST00000375218 ZNF479Q96JC4 524 aa8.9□□□□□ -0.98
UBR4-201ENST00000375218 TWNKQ96RR1 684 aa8.9□□□□□ -0.98
UBR4-201ENST00000375218 CDADC1Q9BWV3 514 aa8.9□□□□□ -0.98
UBR4-201ENST00000375218 ZNF341Q9BYN7 854 aa8.9□□□□□ -0.98
UBR4-201ENST00000375218 NLNQ9BYT8 704 aa8.9□□□□□ -0.98
UBR4-201ENST00000375218 ARMC1Q9NVT9 282 aa8.9□□□□□ -0.98
UBR4-201ENST00000375218 RAD54BQ9Y620 910 aa8.9□□□□□ -0.98
UBR4-201ENST00000375218 HS3ST4Q9Y661 456 aa8.9□□□□□ -0.98
UBR4-201ENST00000375218 COPG1Q9Y678 874 aaKnown RBP8.9□□□□□ -0.98
UBR4-201ENST00000375218 OR14I1A6ND48 311 aa8.9□□□□□ -0.98
UBR4-201ENST00000375218 HELTA6NFD8 242 aa8.9□□□□□ -0.98
UBR4-201ENST00000375218 KCNAB3O43448 404 aa8.9□□□□□ -0.98
UBR4-201ENST00000375218 ACTL6BO94805 426 aa8.9□□□□□ -0.98
UBR4-201ENST00000375218 BAG6P46379 1132 aa8.9□□□□□ -0.98
UBR4-201ENST00000375218 NRIP1P48552 1158 aa8.9□□□□□ -0.98
UBR4-201ENST00000375218 PRKD1Q15139 912 aaPredicted RBP8.9□□□□□ -0.98
UBR4-201ENST00000375218 RAB30Q15771 203 aa8.9□□□□□ -0.98
UBR4-201ENST00000375218 TTC38Q5R3I4 469 aa8.9□□□□□ -0.98
UBR4-201ENST00000375218 STYK1Q6J9G0 422 aa8.9□□□□□ -0.98
UBR4-201ENST00000375218 RNF19BQ6ZMZ0 732 aa8.9□□□□□ -0.98
UBR4-201ENST00000375218 APLFQ8IW19 511 aaPredicted RBP8.9□□□□□ -0.98
UBR4-201ENST00000375218 NCOA7Q8NI08 942 aa8.9□□□□□ -0.98
UBR4-201ENST00000375218 LINC00615Q96LM1 132 aaPredicted RBP8.9□□□□□ -0.98
UBR4-201ENST00000375218 CDRT15Q96T59 188 aa8.9□□□□□ -0.98
UBR4-201ENST00000375218 TLR10Q9BXR5 811 aa8.9□□□□□ -0.98
UBR4-201ENST00000375218 RAVER2Q9HCJ3 691 aaKnown RBP8.9□□□□□ -0.98
UBR4-201ENST00000375218 TMEM184CQ9NVA4 438 aa8.9□□□□□ -0.98
UBR4-201ENST00000375218 GID8Q9NWU2 228 aa8.9□□□□□ -0.98
UBR4-201ENST00000375218 NDE1Q9NXR1 346 aa8.9□□□□□ -0.98
UBR4-201ENST00000375218 ATXN7L1Q9ULK2 861 aaPredicted RBP8.9□□□□□ -0.98
UBR4-201ENST00000375218 NPIPB15A6NHN6 443 aaPredicted RBP8.9□□□□□ -0.99
UBR4-201ENST00000375218 H0Y8G0 127 aa8.9□□□□□ -0.99
UBR4-201ENST00000375218 NOP56O00567 594 aaKnown RBP8.9□□□□□ -0.99
UBR4-201ENST00000375218 DHX15O43143 795 aaKnown RBP8.9□□□□□ -0.99
UBR4-201ENST00000375218 PI15O43692 258 aa8.9□□□□□ -0.99
UBR4-201ENST00000375218 DHFRP00374 187 aa8.9□□□□□ -0.99
UBR4-201ENST00000375218 CLCN7P51798 805 aa8.9□□□□□ -0.99
UBR4-201ENST00000375218 AGFG1P52594 562 aaKnown RBP8.9□□□□□ -0.99
UBR4-201ENST00000375218 FADDQ13158 208 aa8.9□□□□□ -0.99
UBR4-201ENST00000375218 KRT31Q15323 416 aa8.9□□□□□ -0.99
UBR4-201ENST00000375218 SLFN13Q68D06 897 aa8.9□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms