RNA–Protein interactions for RNA: ENST00000374837.7

MAP1LC3A-202, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

TSL 3 BASIC

Gene MAP1LC3A, Length 961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-202ENST00000374837 SMAPO00193 183 aa20.57■□□□□ 0.88
MAP1LC3A-202ENST00000374837 CSO75390 466 aaKnown RBP20.57■□□□□ 0.88
MAP1LC3A-202ENST00000374837 BANF1O75531 89 aa20.57■□□□□ 0.88
MAP1LC3A-202ENST00000374837 POLBP06746 335 aa20.57■□□□□ 0.88
MAP1LC3A-202ENST00000374837 RPL21P46778 160 aaKnown RBP20.57■□□□□ 0.88
MAP1LC3A-202ENST00000374837 CKAP4Q07065 602 aaKnown RBP20.57■□□□□ 0.88
MAP1LC3A-202ENST00000374837 DHX9Q08211 1270 aaKnown RBP20.57■□□□□ 0.88
MAP1LC3A-202ENST00000374837 AMZ1Q400G9 498 aa20.57■□□□□ 0.88
MAP1LC3A-202ENST00000374837 ZNF658BQ4V348 819 aaPredicted RBP20.57■□□□□ 0.88
MAP1LC3A-202ENST00000374837 UNQ6494/PRO21346Q6UXR6 183 aa20.57■□□□□ 0.88
MAP1LC3A-202ENST00000374837 HM13Q8TCT9 377 aa20.57■□□□□ 0.88
MAP1LC3A-202ENST00000374837 GATA6Q92908 595 aa20.57■□□□□ 0.88
MAP1LC3A-202ENST00000374837 SH3KBP1Q96B97 665 aa20.57■□□□□ 0.88
MAP1LC3A-202ENST00000374837 STAMBPL1Q96FJ0 436 aa20.57■□□□□ 0.88
MAP1LC3A-202ENST00000374837 PWWP2AQ96N64 755 aa20.57■□□□□ 0.88
MAP1LC3A-202ENST00000374837 SLC38A3Q99624 504 aa20.57■□□□□ 0.88
MAP1LC3A-202ENST00000374837 ERP44Q9BS26 406 aa20.57■□□□□ 0.88
MAP1LC3A-202ENST00000374837 STN1Q9H668 368 aaKnown RBP20.57■□□□□ 0.88
MAP1LC3A-202ENST00000374837 ACSL5Q9ULC5 683 aa20.57■□□□□ 0.88
MAP1LC3A-202ENST00000374837 ATXN7L1Q9ULK2 861 aaPredicted RBP20.57■□□□□ 0.88
MAP1LC3A-202ENST00000374837 ASXL3Q9C0F0 2248 aa20.57■□□□□ 0.88
MAP1LC3A-202ENST00000374837 ANKRD11Q6UB99 2663 aaPredicted RBP20.56■□□□□ 0.88
MAP1LC3A-202ENST00000374837 ZFYVE26Q68DK2 2539 aa20.56■□□□□ 0.88
MAP1LC3A-202ENST00000374837 PRAMEF33A0A0G2JMD5 474 aa20.56■□□□□ 0.88
MAP1LC3A-202ENST00000374837 ZCWPW2A0A1B0GU75 182 aa20.56■□□□□ 0.88
MAP1LC3A-202ENST00000374837 TP73O15350 636 aa20.56■□□□□ 0.88
MAP1LC3A-202ENST00000374837 ZW10O43264 779 aa20.56■□□□□ 0.88
MAP1LC3A-202ENST00000374837 VIPP01282 170 aa20.56■□□□□ 0.88
MAP1LC3A-202ENST00000374837 PAMP19021 973 aa20.56■□□□□ 0.88
MAP1LC3A-202ENST00000374837 CD1CP29017 333 aa20.56■□□□□ 0.88
MAP1LC3A-202ENST00000374837 HALP42357 657 aa20.56■□□□□ 0.88
MAP1LC3A-202ENST00000374837 TTPAP49638 278 aa20.56■□□□□ 0.88
MAP1LC3A-202ENST00000374837 RPE65Q16518 533 aa20.56■□□□□ 0.88
MAP1LC3A-202ENST00000374837 WHAMMP3Q1A5X7 153 aa20.56■□□□□ 0.88
MAP1LC3A-202ENST00000374837 ISXQ2M1V0 245 aa20.56■□□□□ 0.88
MAP1LC3A-202ENST00000374837 BBS9Q3SYG4 887 aa20.56■□□□□ 0.88
MAP1LC3A-202ENST00000374837 DNAJC21Q5F1R6 531 aaKnown RBP20.56■□□□□ 0.88
MAP1LC3A-202ENST00000374837 NKAIN2Q5VXU1 208 aa20.56■□□□□ 0.88
MAP1LC3A-202ENST00000374837 USP53Q70EK8 1073 aa20.56■□□□□ 0.88
MAP1LC3A-202ENST00000374837 OTUD6BQ8N6M0 293 aa20.56■□□□□ 0.88
MAP1LC3A-202ENST00000374837 AVL9Q8NBF6 648 aa20.56■□□□□ 0.88
MAP1LC3A-202ENST00000374837 GPR150Q8NGU9 434 aa20.56■□□□□ 0.88
MAP1LC3A-202ENST00000374837 TMEM121BQ9BXQ6 578 aaPredicted RBP20.56■□□□□ 0.88
MAP1LC3A-202ENST00000374837 WWP1Q9H0M0 922 aa20.56■□□□□ 0.88
MAP1LC3A-202ENST00000374837 COG4Q9H9E3 785 aa20.56■□□□□ 0.88
MAP1LC3A-202ENST00000374837 VPS37BQ9H9H4 285 aa20.56■□□□□ 0.88
MAP1LC3A-202ENST00000374837 KCNK4Q9NYG8 393 aa20.56■□□□□ 0.88
MAP1LC3A-202ENST00000374837 PCDHB1Q9Y5F3 818 aa20.56■□□□□ 0.88
MAP1LC3A-202ENST00000374837 ARHGEF17Q96PE2 2063 aaPredicted RBP20.55■□□□□ 0.88
MAP1LC3A-202ENST00000374837 IGHV1OR21-1A0A087WYE8 117 aa20.55■□□□□ 0.88
MAP1LC3A-202ENST00000374837 D6RAR5 112 aa20.55■□□□□ 0.88
MAP1LC3A-202ENST00000374837 QSOX1O00391 747 aa20.55■□□□□ 0.88
MAP1LC3A-202ENST00000374837 NDUFS3O75489 264 aa20.55■□□□□ 0.88
MAP1LC3A-202ENST00000374837 USP1O94782 785 aa20.55■□□□□ 0.88
MAP1LC3A-202ENST00000374837 OR56A5P0C7T3 313 aa20.55■□□□□ 0.88
MAP1LC3A-202ENST00000374837 PDX1P52945 283 aa20.55■□□□□ 0.88
MAP1LC3A-202ENST00000374837 MRNIPQ6NTE8 343 aa20.55■□□□□ 0.88
MAP1LC3A-202ENST00000374837 NEPROQ6NW34 567 aa20.55■□□□□ 0.88
MAP1LC3A-202ENST00000374837 SDCCAG8Q86SQ7 713 aaPredicted RBP20.55■□□□□ 0.88
MAP1LC3A-202ENST00000374837 IGDCC3Q8IVU1 814 aa20.55■□□□□ 0.88
MAP1LC3A-202ENST00000374837 TRIM48Q8IWZ4 208 aa20.55■□□□□ 0.88
MAP1LC3A-202ENST00000374837 CXorf40BQ96DE9 158 aa20.55■□□□□ 0.88
MAP1LC3A-202ENST00000374837 INSM2Q96T92 566 aaPredicted RBP20.55■□□□□ 0.88
MAP1LC3A-202ENST00000374837 EBNA1BP2Q99848 306 aaKnown RBP20.55■□□□□ 0.88
MAP1LC3A-202ENST00000374837 LDHAL6BQ9BYZ2 381 aaPredicted RBP20.55■□□□□ 0.88
MAP1LC3A-202ENST00000374837 DPH5Q9H2P9 285 aa20.55■□□□□ 0.88
MAP1LC3A-202ENST00000374837 IL1RAPL1Q9NZN1 696 aa20.55■□□□□ 0.88
MAP1LC3A-202ENST00000374837 TRABD2BA6NFA1 517 aa20.54■□□□□ 0.88
MAP1LC3A-202ENST00000374837 PRMT5O14744 637 aaPredicted RBP20.54■□□□□ 0.88
MAP1LC3A-202ENST00000374837 GSTM1P09488 218 aa20.54■□□□□ 0.88
MAP1LC3A-202ENST00000374837 PGAM1P18669 254 aa20.54■□□□□ 0.88
MAP1LC3A-202ENST00000374837 GSTM4Q03013 218 aa20.54■□□□□ 0.88
MAP1LC3A-202ENST00000374837 DUPD1Q68J44 220 aa20.54■□□□□ 0.88
MAP1LC3A-202ENST00000374837 CAPRIN2Q6IMN6 1127 aaKnown RBP20.54■□□□□ 0.88
MAP1LC3A-202ENST00000374837 TMEM26Q6ZUK4 368 aa20.54■□□□□ 0.88
MAP1LC3A-202ENST00000374837 TMPRSS9Q7Z410 1059 aa20.54■□□□□ 0.88
MAP1LC3A-202ENST00000374837 PDIK1LQ8N165 341 aa20.54■□□□□ 0.88
MAP1LC3A-202ENST00000374837 BBOF1Q8ND07 529 aa20.54■□□□□ 0.88
MAP1LC3A-202ENST00000374837 SPDYE1Q8NFV5 336 aaPredicted RBP20.54■□□□□ 0.88
MAP1LC3A-202ENST00000374837 TBC1D10AQ9BXI6 508 aa20.54■□□□□ 0.88
MAP1LC3A-202ENST00000374837 UCK1Q9HA47 277 aa20.54■□□□□ 0.88
MAP1LC3A-202ENST00000374837 RDH14Q9HBH5 336 aa20.54■□□□□ 0.88
MAP1LC3A-202ENST00000374837 SLC40A1Q9NP59 571 aa20.54■□□□□ 0.88
MAP1LC3A-202ENST00000374837 POT1Q9NUX5 634 aa20.54■□□□□ 0.88
MAP1LC3A-202ENST00000374837 ENTPD2Q9Y5L3 495 aa20.54■□□□□ 0.88
MAP1LC3A-202ENST00000374837 FAM169AQ9Y6X4 670 aa20.54■□□□□ 0.88
MAP1LC3A-202ENST00000374837 FASNP49327 2511 aaKnown RBP20.53■□□□□ 0.88
MAP1LC3A-202ENST00000374837 CPNE6O95741 557 aa20.53■□□□□ 0.88
MAP1LC3A-202ENST00000374837 FTH1P02794 183 aa20.53■□□□□ 0.88
MAP1LC3A-202ENST00000374837 PDHA2P29803 388 aa20.53■□□□□ 0.88
MAP1LC3A-202ENST00000374837 ARL4CP56559 192 aa20.53■□□□□ 0.88
MAP1LC3A-202ENST00000374837 CFHR1Q03591 330 aa20.53■□□□□ 0.88
MAP1LC3A-202ENST00000374837 SQSTM1Q13501 440 aa20.53■□□□□ 0.88
MAP1LC3A-202ENST00000374837 THOC5Q13769 683 aaKnown RBP20.53■□□□□ 0.88
MAP1LC3A-202ENST00000374837 TYSND1Q2T9J0 566 aa20.53■□□□□ 0.88
MAP1LC3A-202ENST00000374837 B3GNT8Q7Z7M8 397 aa20.53■□□□□ 0.88
MAP1LC3A-202ENST00000374837 ELMO1Q92556 727 aa20.53■□□□□ 0.88
MAP1LC3A-202ENST00000374837 ATXN7L3BQ96GX2 97 aa20.53■□□□□ 0.88
MAP1LC3A-202ENST00000374837 RMDN2Q96LZ7 410 aa20.53■□□□□ 0.88
MAP1LC3A-202ENST00000374837 TCF12Q99081 682 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms