RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 KRT1P04264 644 aa13.47□□□□□ -0.25
CXCL12-202ENST00000374426 MTHFD1P11586 935 aaKnown RBP13.47□□□□□ -0.25
CXCL12-202ENST00000374426 SPAM1P38567 509 aa13.47□□□□□ -0.25
CXCL12-202ENST00000374426 PGDP52209 483 aa13.47□□□□□ -0.25
CXCL12-202ENST00000374426 RPS15P62841 145 aaKnown RBP13.47□□□□□ -0.25
CXCL12-202ENST00000374426 TPM4P67936 248 aa13.47□□□□□ -0.25
CXCL12-202ENST00000374426 TUBB4BP68371 445 aa13.47□□□□□ -0.25
CXCL12-202ENST00000374426 HSD11B2P80365 405 aa13.47□□□□□ -0.25
CXCL12-202ENST00000374426 WASHC5Q12768 1159 aa13.47□□□□□ -0.25
CXCL12-202ENST00000374426 TUBB2AQ13885 445 aa13.47□□□□□ -0.25
CXCL12-202ENST00000374426 NADK2Q4G0N4 442 aa13.47□□□□□ -0.25
CXCL12-202ENST00000374426 SIRPB2Q5JXA9 342 aa13.47□□□□□ -0.25
CXCL12-202ENST00000374426 DNTTIP2Q5QJE6 756 aaKnown RBP13.47□□□□□ -0.25
CXCL12-202ENST00000374426 LDLRAP1Q5SW96 308 aa13.47□□□□□ -0.25
CXCL12-202ENST00000374426 GPRC6AQ5T6X5 926 aa13.47□□□□□ -0.25
CXCL12-202ENST00000374426 LRRC38Q5VT99 294 aa13.47□□□□□ -0.25
CXCL12-202ENST00000374426 ZDHHC20Q5W0Z9 365 aa13.47□□□□□ -0.25
CXCL12-202ENST00000374426 METRNLQ641Q3 311 aa13.47□□□□□ -0.25
CXCL12-202ENST00000374426 TMEM220Q6QAJ8 160 aa13.47□□□□□ -0.25
CXCL12-202ENST00000374426 SLC38A9Q8NBW4 561 aa13.47□□□□□ -0.25
CXCL12-202ENST00000374426 CPT1CQ8TCG5 803 aa13.47□□□□□ -0.25
CXCL12-202ENST00000374426 CD180Q99467 661 aa13.47□□□□□ -0.25
CXCL12-202ENST00000374426 SLC25A23Q9BV35 468 aa13.47□□□□□ -0.25
CXCL12-202ENST00000374426 TUBB2BQ9BVA1 445 aa13.47□□□□□ -0.25
CXCL12-202ENST00000374426 IMP3Q9NV31 184 aaKnown RBP13.47□□□□□ -0.25
CXCL12-202ENST00000374426 HRASLS2Q9NWW9 162 aa13.47□□□□□ -0.25
CXCL12-202ENST00000374426 SAE1Q9UBE0 346 aaPredicted RBP13.47□□□□□ -0.25
CXCL12-202ENST00000374426 FAM153AQ9UHL3 310 aa13.47□□□□□ -0.25
CXCL12-202ENST00000374426 PCDHGA9Q9Y5G4 932 aaKnown RBP13.47□□□□□ -0.25
CXCL12-202ENST00000374426 CFAP20Q9Y6A4 193 aaKnown RBP13.47□□□□□ -0.25
CXCL12-202ENST00000374426 DNMT3AQ9Y6K1 912 aaPredicted RBP13.47□□□□□ -0.25
CXCL12-202ENST00000374426 GLYATL1P3A0A0U1RQE8 302 aa13.46□□□□□ -0.25
CXCL12-202ENST00000374426 UBA6A0AVT1 1052 aaPredicted RBP13.46□□□□□ -0.25
CXCL12-202ENST00000374426 ARGFXA6NJG6 315 aa13.46□□□□□ -0.25
CXCL12-202ENST00000374426 BUD23O43709 281 aaKnown RBP13.46□□□□□ -0.25
CXCL12-202ENST00000374426 CPNE3O75131 537 aaKnown RBP13.46□□□□□ -0.25
CXCL12-202ENST00000374426 SCRG1O75711 98 aa13.46□□□□□ -0.25
CXCL12-202ENST00000374426 SORBS2O94875 1100 aaKnown RBP13.46□□□□□ -0.25
CXCL12-202ENST00000374426 AGFG2O95081 481 aa13.46□□□□□ -0.25
CXCL12-202ENST00000374426 EPOP01588 193 aa13.46□□□□□ -0.25
CXCL12-202ENST00000374426 NFKB1P19838 968 aa13.46□□□□□ -0.25
CXCL12-202ENST00000374426 ARHGAP25P42331 645 aa13.46□□□□□ -0.25
CXCL12-202ENST00000374426 ARL4DP49703 201 aa13.46□□□□□ -0.25
CXCL12-202ENST00000374426 GPS2Q13227 327 aa13.46□□□□□ -0.25
CXCL12-202ENST00000374426 GPR19Q15760 415 aa13.46□□□□□ -0.25
CXCL12-202ENST00000374426 PPP2R5EQ16537 467 aa13.46□□□□□ -0.25
CXCL12-202ENST00000374426 PAPD7Q5XG87 772 aaKnown RBP13.46□□□□□ -0.25
CXCL12-202ENST00000374426 DUS1LQ6P1R4 473 aaKnown RBP13.46□□□□□ -0.25
CXCL12-202ENST00000374426 MFSD7Q6UXD7 560 aa13.46□□□□□ -0.25
CXCL12-202ENST00000374426 SLC25A41Q8N5S1 370 aa13.46□□□□□ -0.25
CXCL12-202ENST00000374426 EFCAB3Q8N7B9 438 aa13.46□□□□□ -0.25
CXCL12-202ENST00000374426 BEND7Q8N7W2 519 aaPredicted RBP13.46□□□□□ -0.25
CXCL12-202ENST00000374426 ZNF501Q96CX3 271 aaPredicted RBP13.46□□□□□ -0.25
CXCL12-202ENST00000374426 OXNAD1Q96HP4 312 aaPredicted RBP13.46□□□□□ -0.25
CXCL12-202ENST00000374426 MRGPRX2Q96LB1 330 aa13.46□□□□□ -0.25
CXCL12-202ENST00000374426 PPM1MQ96MI6 270 aa13.46□□□□□ -0.25
CXCL12-202ENST00000374426 INSM2Q96T92 566 aaPredicted RBP13.46□□□□□ -0.25
CXCL12-202ENST00000374426 ING2Q9H160 280 aa13.46□□□□□ -0.25
CXCL12-202ENST00000374426 KCND1Q9NSA2 647 aa13.46□□□□□ -0.25
CXCL12-202ENST00000374426 SMOXQ9NWM0 555 aa13.46□□□□□ -0.25
CXCL12-202ENST00000374426 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.46□□□□□ -0.25
CXCL12-202ENST00000374426 IFNKQ9P0W0 207 aa13.46□□□□□ -0.25
CXCL12-202ENST00000374426 PLEKHB1Q9UF11 243 aaPredicted RBP13.46□□□□□ -0.25
CXCL12-202ENST00000374426 FARSAQ9Y285 508 aaKnown RBP13.46□□□□□ -0.25
CXCL12-202ENST00000374426 CRYBG3Q68DQ2 2970 aa13.46□□□□□ -0.26
CXCL12-202ENST00000374426 CELSR2Q9HCU4 2923 aa13.46□□□□□ -0.26
CXCL12-202ENST00000374426 F5H423 210 aaPredicted RBP13.45□□□□□ -0.26
CXCL12-202ENST00000374426 ZBTB11O95625 1053 aaPredicted RBP13.45□□□□□ -0.26
CXCL12-202ENST00000374426 PECAM1P16284 738 aaPredicted RBP13.45□□□□□ -0.26
CXCL12-202ENST00000374426 LPOP22079 712 aaPredicted RBP13.45□□□□□ -0.26
CXCL12-202ENST00000374426 PBLDP30039 288 aaPredicted RBP13.45□□□□□ -0.26
CXCL12-202ENST00000374426 CDKN2BP42772 138 aa13.45□□□□□ -0.26
CXCL12-202ENST00000374426 PTGIRP43119 386 aa13.45□□□□□ -0.26
CXCL12-202ENST00000374426 NR2C2P49116 596 aa13.45□□□□□ -0.26
CXCL12-202ENST00000374426 CCL11P51671 97 aa13.45□□□□□ -0.26
CXCL12-202ENST00000374426 KPNA2P52292 529 aaKnown RBP13.45□□□□□ -0.26
CXCL12-202ENST00000374426 PDE1BQ01064 536 aa13.45□□□□□ -0.26
CXCL12-202ENST00000374426 XRCC4Q13426 336 aa13.45□□□□□ -0.26
CXCL12-202ENST00000374426 SLC1A5Q15758 541 aa13.45□□□□□ -0.26
CXCL12-202ENST00000374426 FNBP1LQ5T0N5 605 aa13.45□□□□□ -0.26
CXCL12-202ENST00000374426 FHL5Q5TD97 284 aa13.45□□□□□ -0.26
CXCL12-202ENST00000374426 PRAMEF17Q5VTA0 474 aa13.45□□□□□ -0.26
CXCL12-202ENST00000374426 IZUMO3Q5VZ72 239 aa13.45□□□□□ -0.26
CXCL12-202ENST00000374426 GLT6D1Q7Z4J2 308 aa13.45□□□□□ -0.26
CXCL12-202ENST00000374426 OOSP2Q86WS3 158 aa13.45□□□□□ -0.26
CXCL12-202ENST00000374426 TMEM126BQ8IUX1 230 aa13.45□□□□□ -0.26
CXCL12-202ENST00000374426 RHOT1Q8IXI2 618 aa13.45□□□□□ -0.26
CXCL12-202ENST00000374426 SPDYE1Q8NFV5 336 aaPredicted RBP13.45□□□□□ -0.26
CXCL12-202ENST00000374426 BLOC1S5Q8TDH9 187 aa13.45□□□□□ -0.26
CXCL12-202ENST00000374426 ADAMTS17Q8TE56 1095 aa13.45□□□□□ -0.26
CXCL12-202ENST00000374426 NAT14Q8WUY8 206 aa13.45□□□□□ -0.26
CXCL12-202ENST00000374426 TFB1MQ8WVM0 346 aaKnown RBP13.45□□□□□ -0.26
CXCL12-202ENST00000374426 MR1Q95460 341 aa13.45□□□□□ -0.26
CXCL12-202ENST00000374426 DNAJC7Q99615 494 aa13.45□□□□□ -0.26
CXCL12-202ENST00000374426 WWP1Q9H0M0 922 aa13.45□□□□□ -0.26
CXCL12-202ENST00000374426 CHST8Q9H2A9 424 aa13.45□□□□□ -0.26
CXCL12-202ENST00000374426 KIR3DX1Q9H7L2 352 aa13.45□□□□□ -0.26
CXCL12-202ENST00000374426 ACSS2Q9NR19 701 aa13.45□□□□□ -0.26
CXCL12-202ENST00000374426 HACD3Q9P035 362 aa13.45□□□□□ -0.26
CXCL12-202ENST00000374426 SLC24A2Q9UI40 661 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms