RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 HSD3B2P26439 372 aa8.59□□□□□ -1.03
SNRNP40-202ENST00000373720 SLC7A1P30825 629 aa8.59□□□□□ -1.03
SNRNP40-202ENST00000373720 KCNC1P48547 511 aa8.59□□□□□ -1.03
SNRNP40-202ENST00000373720 KRT6CP48668 564 aa8.59□□□□□ -1.03
SNRNP40-202ENST00000373720 SGSHP51688 502 aa8.59□□□□□ -1.03
SNRNP40-202ENST00000373720 CLNS1AP54105 237 aaKnown RBP8.59□□□□□ -1.03
SNRNP40-202ENST00000373720 ST8SIA6P61647 398 aa8.59□□□□□ -1.03
SNRNP40-202ENST00000373720 ELP6Q0PNE2 266 aa8.59□□□□□ -1.03
SNRNP40-202ENST00000373720 ABRQ12979 859 aa8.59□□□□□ -1.03
SNRNP40-202ENST00000373720 MED21Q13503 144 aa8.59□□□□□ -1.03
SNRNP40-202ENST00000373720 INPP5AQ14642 412 aa8.59□□□□□ -1.03
SNRNP40-202ENST00000373720 ZNF77Q15935 545 aa8.59□□□□□ -1.03
SNRNP40-202ENST00000373720 PPP1R3AQ16821 1122 aa8.59□□□□□ -1.03
SNRNP40-202ENST00000373720 DPY19L1Q2PZI1 675 aa8.59□□□□□ -1.03
SNRNP40-202ENST00000373720 KIF19Q2TAC6 998 aa8.59□□□□□ -1.03
SNRNP40-202ENST00000373720 OGFRL1Q5TC84 451 aaPredicted RBP8.59□□□□□ -1.03
SNRNP40-202ENST00000373720 CACHD1Q5VU97 1274 aa8.59□□□□□ -1.03
SNRNP40-202ENST00000373720 PLPP4Q5VZY2 271 aa8.59□□□□□ -1.03
SNRNP40-202ENST00000373720 LINGO4Q6UY18 593 aa8.59□□□□□ -1.03
SNRNP40-202ENST00000373720 DSG4Q86SJ6 1040 aa8.59□□□□□ -1.03
SNRNP40-202ENST00000373720 PHYKPLQ8IUZ5 450 aa8.59□□□□□ -1.03
SNRNP40-202ENST00000373720 DDIASQ8IXT1 998 aa8.59□□□□□ -1.03
SNRNP40-202ENST00000373720 KLHDC8AQ8IYD2 350 aa8.59□□□□□ -1.03
SNRNP40-202ENST00000373720 PIANPQ8IYJ0 282 aa8.59□□□□□ -1.03
SNRNP40-202ENST00000373720 ADGRG2Q8IZP9 1017 aa8.59□□□□□ -1.03
SNRNP40-202ENST00000373720 APCDD1Q8J025 514 aa8.59□□□□□ -1.03
SNRNP40-202ENST00000373720 SPATA6LQ8N4H0 392 aa8.59□□□□□ -1.03
SNRNP40-202ENST00000373720 TRAM1L1Q8N609 369 aa8.59□□□□□ -1.03
SNRNP40-202ENST00000373720 POU5F2Q8N7G0 328 aa8.59□□□□□ -1.03
SNRNP40-202ENST00000373720 FBXO15Q8NCQ5 510 aaPredicted RBP8.59□□□□□ -1.03
SNRNP40-202ENST00000373720 TMIEQ8NEW7 156 aa8.59□□□□□ -1.03
SNRNP40-202ENST00000373720 OR52E4Q8NGH9 312 aa8.59□□□□□ -1.03
SNRNP40-202ENST00000373720 METTL6Q8TCB7 284 aa8.59□□□□□ -1.03
SNRNP40-202ENST00000373720 MCOLN3Q8TDD5 553 aa8.59□□□□□ -1.03
SNRNP40-202ENST00000373720 TRPC4APQ8TEL6 797 aa8.59□□□□□ -1.03
SNRNP40-202ENST00000373720 TRIM43Q96BQ3 446 aaPredicted RBP8.59□□□□□ -1.03
SNRNP40-202ENST00000373720 PPP1R16AQ96I34 528 aa8.59□□□□□ -1.03
SNRNP40-202ENST00000373720 SLC45A3Q96JT2 553 aa8.59□□□□□ -1.03
SNRNP40-202ENST00000373720 EXOC2Q96KP1 924 aa8.59□□□□□ -1.03
SNRNP40-202ENST00000373720 SLC22A12Q96S37 553 aa8.59□□□□□ -1.03
SNRNP40-202ENST00000373720 UHRF1Q96T88 793 aaPredicted RBP8.59□□□□□ -1.03
SNRNP40-202ENST00000373720 ZBTB18Q99592 522 aa8.59□□□□□ -1.03
SNRNP40-202ENST00000373720 ECSITQ9BQ95 431 aa8.59□□□□□ -1.03
SNRNP40-202ENST00000373720 CORO1BQ9BR76 489 aa8.59□□□□□ -1.03
SNRNP40-202ENST00000373720 GPATCH1Q9BRR8 931 aaKnown RBP8.59□□□□□ -1.03
SNRNP40-202ENST00000373720 BBS2Q9BXC9 721 aa8.59□□□□□ -1.03
SNRNP40-202ENST00000373720 CD244Q9BZW8 370 aa8.59□□□□□ -1.03
SNRNP40-202ENST00000373720 BRD9Q9H8M2 597 aa8.59□□□□□ -1.03
SNRNP40-202ENST00000373720 PARVBQ9HBI1 364 aa8.59□□□□□ -1.03
SNRNP40-202ENST00000373720 AIG1Q9NVV5 245 aa8.59□□□□□ -1.03
SNRNP40-202ENST00000373720 THG1LQ9NWX6 298 aaKnown RBP8.59□□□□□ -1.03
SNRNP40-202ENST00000373720 ACTR3BQ9P1U1 418 aa8.59□□□□□ -1.03
SNRNP40-202ENST00000373720 OPTCQ9UBM4 332 aa8.59□□□□□ -1.03
SNRNP40-202ENST00000373720 CD300AQ9UGN4 299 aa8.59□□□□□ -1.03
SNRNP40-202ENST00000373720 EVLQ9UI08 416 aaPredicted RBP8.59□□□□□ -1.03
SNRNP40-202ENST00000373720 SNX6Q9UNH7 406 aa8.59□□□□□ -1.03
SNRNP40-202ENST00000373720 FCF1Q9Y324 198 aaKnown RBP8.59□□□□□ -1.03
SNRNP40-202ENST00000373720 ANGPTL3Q9Y5C1 460 aa8.59□□□□□ -1.03
SNRNP40-202ENST00000373720 PCDHGA7Q9Y5G6 932 aa8.59□□□□□ -1.03
SNRNP40-202ENST00000373720 GPR45Q9Y5Y3 372 aa8.59□□□□□ -1.03
SNRNP40-202ENST00000373720 ZBBXA8MT70 800 aa8.58□□□□□ -1.04
SNRNP40-202ENST00000373720 PIP5K1BO14986 540 aa8.58□□□□□ -1.04
SNRNP40-202ENST00000373720 TLL1O43897 1013 aa8.58□□□□□ -1.04
SNRNP40-202ENST00000373720 GMNNO75496 209 aa8.58□□□□□ -1.04
SNRNP40-202ENST00000373720 SKAP2O75563 359 aaPredicted RBP8.58□□□□□ -1.04
SNRNP40-202ENST00000373720 STK16O75716 305 aa8.58□□□□□ -1.04
SNRNP40-202ENST00000373720 SLC25A14O95258 325 aaPredicted RBP8.58□□□□□ -1.04
SNRNP40-202ENST00000373720 NFATC1O95644 943 aa8.58□□□□□ -1.04
SNRNP40-202ENST00000373720 BAG2O95816 211 aa8.58□□□□□ -1.04
SNRNP40-202ENST00000373720 RHOP08100 348 aa8.58□□□□□ -1.04
SNRNP40-202ENST00000373720 PIRTP0C851 137 aa8.58□□□□□ -1.04
SNRNP40-202ENST00000373720 PRPS2P11908 318 aa8.58□□□□□ -1.04
SNRNP40-202ENST00000373720 ATP1B2P14415 290 aaPredicted RBP8.58□□□□□ -1.04
SNRNP40-202ENST00000373720 IL10P22301 178 aa8.58□□□□□ -1.04
SNRNP40-202ENST00000373720 HLA-FP30511 346 aa8.58□□□□□ -1.04
SNRNP40-202ENST00000373720 HMOX2P30519 316 aa8.58□□□□□ -1.04
SNRNP40-202ENST00000373720 VIPR1P32241 457 aa8.58□□□□□ -1.04
SNRNP40-202ENST00000373720 EIF2DP41214 584 aaKnown RBP8.58□□□□□ -1.04
SNRNP40-202ENST00000373720 SPINT3P49223 89 aa8.58□□□□□ -1.04
SNRNP40-202ENST00000373720 CCNHP51946 323 aaPredicted RBP8.58□□□□□ -1.04
SNRNP40-202ENST00000373720 GTF2H2Q13888 395 aa8.58□□□□□ -1.04
SNRNP40-202ENST00000373720 CCNIQ14094 377 aa8.58□□□□□ -1.04
SNRNP40-202ENST00000373720 GBX1Q14549 363 aa8.58□□□□□ -1.04
SNRNP40-202ENST00000373720 PDGFRLQ15198 375 aa8.58□□□□□ -1.04
SNRNP40-202ENST00000373720 RBBP7Q16576 425 aa8.58□□□□□ -1.04
SNRNP40-202ENST00000373720 FXNQ16595 210 aa8.58□□□□□ -1.04
SNRNP40-202ENST00000373720 ZNF805Q5CZA5 627 aa8.58□□□□□ -1.04
SNRNP40-202ENST00000373720 DGKKQ5KSL6 1271 aa8.58□□□□□ -1.04
SNRNP40-202ENST00000373720 FAM182AQ5T1J6 154 aa8.58□□□□□ -1.04
SNRNP40-202ENST00000373720 REP15Q6BDI9 236 aa8.58□□□□□ -1.04
SNRNP40-202ENST00000373720 ZNF787Q6DD87 383 aa8.58□□□□□ -1.04
SNRNP40-202ENST00000373720 GTF2H2CQ6P1K8 395 aa8.58□□□□□ -1.04
SNRNP40-202ENST00000373720 CRTC1Q6UUV9 634 aa8.58□□□□□ -1.04
SNRNP40-202ENST00000373720 SBSNQ6UWP8 590 aa8.58□□□□□ -1.04
SNRNP40-202ENST00000373720 LPCAT2Q7L5N7 544 aa8.58□□□□□ -1.04
SNRNP40-202ENST00000373720 MILR1Q7Z6M3 343 aa8.58□□□□□ -1.04
SNRNP40-202ENST00000373720 LDB1Q86U70 411 aaPredicted RBP8.58□□□□□ -1.04
SNRNP40-202ENST00000373720 PIM3Q86V86 326 aa8.58□□□□□ -1.04
SNRNP40-202ENST00000373720 DHFR2Q86XF0 187 aa8.58□□□□□ -1.04
SNRNP40-202ENST00000373720 PTRH1Q86Y79 214 aaKnown RBP8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms