RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 OSER1Q9NX31 292 aa11.41□□□□□ -0.58
VCL-202ENST00000372755 TAS2R7Q9NYW3 318 aa11.41□□□□□ -0.58
VCL-202ENST00000372755 TGFB1I1O43294 461 aa11.41□□□□□ -0.58
VCL-202ENST00000372755 OR1F1O43749 312 aa11.41□□□□□ -0.58
VCL-202ENST00000372755 GRK6P43250 576 aa11.41□□□□□ -0.58
VCL-202ENST00000372755 NDST2P52849 883 aa11.41□□□□□ -0.58
VCL-202ENST00000372755 LIMK2P53671 638 aa11.41□□□□□ -0.58
VCL-202ENST00000372755 SLC20A2Q08357 652 aa11.41□□□□□ -0.58
VCL-202ENST00000372755 ADNP2Q6IQ32 1131 aa11.41□□□□□ -0.58
VCL-202ENST00000372755 ADGRG6Q86SQ4 1221 aa11.41□□□□□ -0.58
VCL-202ENST00000372755 FAM129CQ86XR2 697 aa11.41□□□□□ -0.58
VCL-202ENST00000372755 SLC30A8Q8IWU4 369 aa11.41□□□□□ -0.58
VCL-202ENST00000372755 LPGAT1Q92604 370 aa11.41□□□□□ -0.58
VCL-202ENST00000372755 ALG2Q9H553 416 aa11.41□□□□□ -0.58
VCL-202ENST00000372755 GMFGO60234 142 aa11.41□□□□□ -0.58
VCL-202ENST00000372755 HEPACAMQ14CZ8 416 aa11.41□□□□□ -0.58
VCL-202ENST00000372755 ATAT1Q5SQI0 421 aa11.41□□□□□ -0.58
VCL-202ENST00000372755 NUP54Q7Z3B4 507 aa11.41□□□□□ -0.58
VCL-202ENST00000372755 CFAP206Q8IYR0 622 aa11.41□□□□□ -0.58
VCL-202ENST00000372755 NETO2Q8NC67 525 aa11.41□□□□□ -0.58
VCL-202ENST00000372755 OR2AJ1Q8NGZ0 328 aa11.41□□□□□ -0.58
VCL-202ENST00000372755 OR4C6Q8NH72 309 aa11.41□□□□□ -0.58
VCL-202ENST00000372755 HTRA1Q92743 480 aa11.41□□□□□ -0.58
VCL-202ENST00000372755 PLD4Q96BZ4 506 aa11.41□□□□□ -0.58
VCL-202ENST00000372755 CENPNQ96H22 339 aaPredicted RBP11.41□□□□□ -0.58
VCL-202ENST00000372755 INPP4AQ96PE3 977 aaPredicted RBP11.41□□□□□ -0.58
VCL-202ENST00000372755 GPATCH1Q9BRR8 931 aaKnown RBP11.41□□□□□ -0.58
VCL-202ENST00000372755 UNC93B1Q9H1C4 597 aa11.41□□□□□ -0.58
VCL-202ENST00000372755 TIMM22Q9Y584 194 aa11.41□□□□□ -0.58
VCL-202ENST00000372755 GNA12Q03113 381 aa11.41□□□□□ -0.58
VCL-202ENST00000372755 MINDY4Q4G0A6 757 aa11.41□□□□□ -0.58
VCL-202ENST00000372755 MFSD5Q6N075 450 aa11.41□□□□□ -0.58
VCL-202ENST00000372755 DNAJB7Q7Z6W7 309 aaPredicted RBP11.41□□□□□ -0.58
VCL-202ENST00000372755 NRSN1Q8IZ57 195 aa11.41□□□□□ -0.58
VCL-202ENST00000372755 UPF1Q92900 1129 aaKnown RBP eCLIP11.41□□□□□ -0.584e-21■■■■□ 24.8
VCL-202ENST00000372755 NUSAP1Q9BXS6 441 aaKnown RBP11.41□□□□□ -0.58
VCL-202ENST00000372755 PLK2Q9NYY3 685 aa11.41□□□□□ -0.58
VCL-202ENST00000372755 FBXW2Q9UKT8 454 aa11.41□□□□□ -0.58
VCL-202ENST00000372755 ZC3H13Q5T200 1668 aaKnown RBP11.4□□□□□ -0.58
VCL-202ENST00000372755 A0A1B0GVM2 712 aa11.4□□□□□ -0.58
VCL-202ENST00000372755 TCAF2A6NFQ2 919 aa11.4□□□□□ -0.58
VCL-202ENST00000372755 KCNU1A8MYU2 1149 aa11.4□□□□□ -0.58
VCL-202ENST00000372755 ITGB5P18084 799 aa11.4□□□□□ -0.58
VCL-202ENST00000372755 DDX6P26196 483 aaKnown RBP eCLIP11.4□□□□□ -0.584e-7■□□□□ 9.5
VCL-202ENST00000372755 HSPA7P48741 367 aa11.4□□□□□ -0.58
VCL-202ENST00000372755 MTTPP55157 894 aa11.4□□□□□ -0.58
VCL-202ENST00000372755 PITPNAQ00169 270 aa11.4□□□□□ -0.58
VCL-202ENST00000372755 OLFML1Q6UWY5 402 aa11.4□□□□□ -0.58
VCL-202ENST00000372755 NANOGNBQ7Z5D8 188 aa11.4□□□□□ -0.58
VCL-202ENST00000372755 LIX1Q8N485 282 aa11.4□□□□□ -0.58
VCL-202ENST00000372755 CCDC115Q96NT0 180 aa11.4□□□□□ -0.58
VCL-202ENST00000372755 B3GNT5Q9BYG0 378 aa11.4□□□□□ -0.58
VCL-202ENST00000372755 ATG10Q9H0Y0 220 aa11.4□□□□□ -0.58
VCL-202ENST00000372755 ANXA2P2A6NMY6 339 aa11.4□□□□□ -0.58
VCL-202ENST00000372755 MAGEB17A8MXT2 336 aa11.4□□□□□ -0.58
VCL-202ENST00000372755 SYN3O14994 580 aa11.4□□□□□ -0.58
VCL-202ENST00000372755 MATN3O15232 486 aa11.4□□□□□ -0.58
VCL-202ENST00000372755 INSIG1O15503 277 aa11.4□□□□□ -0.58
VCL-202ENST00000372755 B3GALT2O43825 422 aa11.4□□□□□ -0.58
VCL-202ENST00000372755 NME6O75414 186 aaPredicted RBP11.4□□□□□ -0.58
VCL-202ENST00000372755 ANXA2P07355 339 aaKnown RBP11.4□□□□□ -0.58
VCL-202ENST00000372755 PBX3P40426 434 aa11.4□□□□□ -0.58
VCL-202ENST00000372755 RASGEF1BQ0VAM2 473 aa11.4□□□□□ -0.58
VCL-202ENST00000372755 CHIT1Q13231 466 aa11.4□□□□□ -0.58
VCL-202ENST00000372755 SLC9B1Q4ZJI4 515 aa11.4□□□□□ -0.58
VCL-202ENST00000372755 CLNKQ7Z7G1 428 aa11.4□□□□□ -0.58
VCL-202ENST00000372755 AMIGO1Q86WK6 493 aa11.4□□□□□ -0.58
VCL-202ENST00000372755 DNAJB8Q8NHS0 232 aa11.4□□□□□ -0.58
VCL-202ENST00000372755 ART5Q96L15 291 aa11.4□□□□□ -0.58
VCL-202ENST00000372755 GPR20Q99678 358 aa11.4□□□□□ -0.58
VCL-202ENST00000372755 HEPHQ9BQS7 1158 aa11.4□□□□□ -0.58
VCL-202ENST00000372755 CHRAC1Q9NRG0 131 aa11.4□□□□□ -0.58
VCL-202ENST00000372755 DSC2Q02487 901 aa11.4□□□□□ -0.58
VCL-202ENST00000372755 ABHD15Q6UXT9 468 aa11.4□□□□□ -0.58
VCL-202ENST00000372755 P2RY8Q86VZ1 359 aa11.4□□□□□ -0.58
VCL-202ENST00000372755 PLD5Q8N7P1 536 aa11.4□□□□□ -0.58
VCL-202ENST00000372755 CPXM1Q96SM3 734 aa11.4□□□□□ -0.58
VCL-202ENST00000372755 MAF1Q9H063 256 aa11.4□□□□□ -0.58
VCL-202ENST00000372755 SLC28A3Q9HAS3 691 aa11.4□□□□□ -0.58
VCL-202ENST00000372755 SSU72Q9NP77 194 aaKnown RBP11.4□□□□□ -0.58
VCL-202ENST00000372755 DUS2Q9NX74 493 aaKnown RBP11.4□□□□□ -0.58
VCL-202ENST00000372755 MEMO1Q9Y316 297 aa11.4□□□□□ -0.58
VCL-202ENST00000372755 ZFP37Q9Y6Q3 630 aaPredicted RBP11.4□□□□□ -0.58
VCL-202ENST00000372755 PRORSD1PA6NEY8 169 aa11.4□□□□□ -0.58
VCL-202ENST00000372755 COL6A1P12109 1028 aa11.4□□□□□ -0.58
VCL-202ENST00000372755 CCNFP41002 786 aa11.4□□□□□ -0.58
VCL-202ENST00000372755 TSPAN5P62079 268 aa11.4□□□□□ -0.58
VCL-202ENST00000372755 IL17AQ16552 155 aa11.4□□□□□ -0.58
VCL-202ENST00000372755 IFI44LQ53G44 452 aa11.4□□□□□ -0.58
VCL-202ENST00000372755 ADGRD1Q6QNK2 874 aa11.4□□□□□ -0.58
VCL-202ENST00000372755 AHSA2Q719I0 299 aa11.4□□□□□ -0.58
VCL-202ENST00000372755 SLC35G5Q96KT7 338 aa11.4□□□□□ -0.58
VCL-202ENST00000372755 NSMCE3Q96MG7 304 aa11.4□□□□□ -0.58
VCL-202ENST00000372755 PCDHB18PQ96TA0 734 aa11.4□□□□□ -0.58
VCL-202ENST00000372755 RAB11FIP5Q9BXF6 653 aa11.4□□□□□ -0.58
VCL-202ENST00000372755 PCDHGC3Q9UN70 934 aa11.4□□□□□ -0.58
VCL-202ENST00000372755 MED31Q9Y3C7 131 aa11.4□□□□□ -0.58
VCL-202ENST00000372755 PITPNM1O00562 1244 aa11.4□□□□□ -0.59
VCL-202ENST00000372755 SERPINA3P01011 423 aa11.4□□□□□ -0.59
VCL-202ENST00000372755 CD2P06729 351 aa11.4□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms