RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 CIR1Q86X95 450 aaPredicted RBP5.35□□□□□ -1.55
ATG4A-204ENST00000372246 C8orf59Q8N0T1 100 aaPredicted RBP5.35□□□□□ -1.55
ATG4A-204ENST00000372246 BEND7Q8N7W2 519 aaPredicted RBP5.35□□□□□ -1.55
ATG4A-204ENST00000372246 C2CD4AQ8NCU7 369 aaPredicted RBP5.35□□□□□ -1.55
ATG4A-204ENST00000372246 OR52B6Q8NGF0 335 aa5.35□□□□□ -1.55
ATG4A-204ENST00000372246 OR13J1Q8NGT2 312 aa5.35□□□□□ -1.55
ATG4A-204ENST00000372246 OR10A6Q8NH74 314 aa5.35□□□□□ -1.55
ATG4A-204ENST00000372246 TOP1MTQ969P6 601 aa5.35□□□□□ -1.55
ATG4A-204ENST00000372246 ZUFSPQ96AP4 578 aa5.35□□□□□ -1.55
ATG4A-204ENST00000372246 CEP295NLQ96MC4 621 aa5.35□□□□□ -1.55
ATG4A-204ENST00000372246 NEDD4LQ96PU5 975 aa5.35□□□□□ -1.55
ATG4A-204ENST00000372246 NODALQ96S42 347 aa5.35□□□□□ -1.55
ATG4A-204ENST00000372246 CTRCQ99895 268 aa5.35□□□□□ -1.55
ATG4A-204ENST00000372246 PAAF1Q9BRP4 392 aa5.35□□□□□ -1.55
ATG4A-204ENST00000372246 ARHGAP9Q9BRR9 750 aa5.35□□□□□ -1.55
ATG4A-204ENST00000372246 TTYH2Q9BSA4 534 aa5.35□□□□□ -1.55
ATG4A-204ENST00000372246 HGH1Q9BTY7 390 aa5.35□□□□□ -1.55
ATG4A-204ENST00000372246 SLC7A5P2Q9GIP4 190 aa5.35□□□□□ -1.55
ATG4A-204ENST00000372246 HOXD1Q9GZZ0 328 aa5.35□□□□□ -1.55
ATG4A-204ENST00000372246 RIBC2Q9H4K1 309 aa5.35□□□□□ -1.55
ATG4A-204ENST00000372246 GPN2Q9H9Y4 310 aaPredicted RBP5.35□□□□□ -1.55
ATG4A-204ENST00000372246 SPC25Q9HBM1 224 aa5.35□□□□□ -1.55
ATG4A-204ENST00000372246 LRRC4Q9HBW1 653 aa5.35□□□□□ -1.55
ATG4A-204ENST00000372246 RBM22Q9NW64 420 aaKnown RBP eCLIP5.35□□□□□ -1.55
ATG4A-204ENST00000372246 GDAP2Q9NXN4 497 aa5.35□□□□□ -1.55
ATG4A-204ENST00000372246 ANKMY1Q9P2S6 941 aa5.35□□□□□ -1.55
ATG4A-204ENST00000372246 PPP1R1BQ9UD71 204 aaPredicted RBP5.35□□□□□ -1.55
ATG4A-204ENST00000372246 KLHL3Q9UH77 587 aa5.35□□□□□ -1.55
ATG4A-204ENST00000372246 PTBP2Q9UKA9 531 aaKnown RBP5.35□□□□□ -1.55
ATG4A-204ENST00000372246 SNX6Q9UNH7 406 aa5.35□□□□□ -1.55
ATG4A-204ENST00000372246 ANKRD6Q9Y2G4 727 aa5.35□□□□□ -1.55
ATG4A-204ENST00000372246 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.35□□□□□ -1.55
ATG4A-204ENST00000372246 UBA6A0AVT1 1052 aaPredicted RBP5.35□□□□□ -1.55
ATG4A-204ENST00000372246 SMIM30A4D0T7 59 aa5.35□□□□□ -1.55
ATG4A-204ENST00000372246 CCDC154A6NI56 674 aa5.35□□□□□ -1.55
ATG4A-204ENST00000372246 ASB14A6NK59 587 aa5.35□□□□□ -1.55
ATG4A-204ENST00000372246 AQP12BA6NM10 295 aa5.35□□□□□ -1.55
ATG4A-204ENST00000372246 SYCE1LA8MT33 242 aa5.35□□□□□ -1.55
ATG4A-204ENST00000372246 NOTOA8MTQ0 251 aa5.35□□□□□ -1.55
ATG4A-204ENST00000372246 TTC34A8MYJ7 566 aa5.35□□□□□ -1.55
ATG4A-204ENST00000372246 SUPT3HB4E1H0 165 aa5.35□□□□□ -1.55
ATG4A-204ENST00000372246 F8W810 466 aa5.35□□□□□ -1.55
ATG4A-204ENST00000372246 G3V2T6 193 aa5.35□□□□□ -1.55
ATG4A-204ENST00000372246 GNGT2O14610 69 aa5.35□□□□□ -1.55
ATG4A-204ENST00000372246 AZIN1O14977 448 aa5.35□□□□□ -1.55
ATG4A-204ENST00000372246 SOAT2O75908 522 aa5.35□□□□□ -1.55
ATG4A-204ENST00000372246 RECQL5O94762 991 aaPredicted RBP5.35□□□□□ -1.55
ATG4A-204ENST00000372246 OR4F21O95013 312 aa5.35□□□□□ -1.55
ATG4A-204ENST00000372246 PGLSO95336 258 aa5.35□□□□□ -1.55
ATG4A-204ENST00000372246 SEC24AO95486 1093 aa5.35□□□□□ -1.55
ATG4A-204ENST00000372246 CD4P01730 458 aa5.35□□□□□ -1.55
ATG4A-204ENST00000372246 MT-ND2P03891 347 aa5.35□□□□□ -1.55
ATG4A-204ENST00000372246 ENO2P09104 434 aaPredicted RBP5.35□□□□□ -1.55
ATG4A-204ENST00000372246 CNPP09543 421 aaKnown RBP5.35□□□□□ -1.55
ATG4A-204ENST00000372246 HSD17B1P14061 328 aa5.35□□□□□ -1.55
ATG4A-204ENST00000372246 ALOX12P18054 663 aa5.35□□□□□ -1.55
ATG4A-204ENST00000372246 IMPDH1P20839 514 aa5.35□□□□□ -1.55
ATG4A-204ENST00000372246 CXCR2P25025 360 aa5.35□□□□□ -1.55
ATG4A-204ENST00000372246 HOXA11P31270 313 aaPredicted RBP5.35□□□□□ -1.55
ATG4A-204ENST00000372246 CD86P42081 329 aa5.35□□□□□ -1.55
ATG4A-204ENST00000372246 NPY2RP49146 381 aa5.35□□□□□ -1.55
ATG4A-204ENST00000372246 ALDH7A1P49419 539 aaKnown RBP5.35□□□□□ -1.55
ATG4A-204ENST00000372246 ACADVLP49748 655 aa5.35□□□□□ -1.55
ATG4A-204ENST00000372246 DOC2BQ14184 412 aa5.35□□□□□ -1.55
ATG4A-204ENST00000372246 PTGR1Q14914 329 aa5.35□□□□□ -1.55
ATG4A-204ENST00000372246 MAPRE2Q15555 327 aa5.35□□□□□ -1.55
ATG4A-204ENST00000372246 TSNQ15631 228 aaKnown RBP5.35□□□□□ -1.55
ATG4A-204ENST00000372246 C4orf46Q504U0 113 aa5.35□□□□□ -1.55
ATG4A-204ENST00000372246 SGO1Q5FBB7 561 aa5.35□□□□□ -1.55
ATG4A-204ENST00000372246 AGAP7PQ5VUJ5 663 aa5.35□□□□□ -1.55
ATG4A-204ENST00000372246 SDHAF4Q5VUM1 108 aa5.35□□□□□ -1.55
ATG4A-204ENST00000372246 RAP1GAP2Q684P5 730 aa5.35□□□□□ -1.55
ATG4A-204ENST00000372246 DET1Q7L5Y6 550 aa5.35□□□□□ -1.55
ATG4A-204ENST00000372246 SYVN1Q86TM6 617 aa5.35□□□□□ -1.55
ATG4A-204ENST00000372246 ANKRD46Q86W74 232 aa5.35□□□□□ -1.55
ATG4A-204ENST00000372246 LYSMD2Q8IV50 215 aa5.35□□□□□ -1.55
ATG4A-204ENST00000372246 AQP12AQ8IXF9 295 aa5.35□□□□□ -1.55
ATG4A-204ENST00000372246 RIMKLAQ8IXN7 391 aa5.35□□□□□ -1.55
ATG4A-204ENST00000372246 DCP1BQ8IZD4 617 aaKnown RBP5.35□□□□□ -1.55
ATG4A-204ENST00000372246 PGBD5Q8N414 524 aa5.35□□□□□ -1.55
ATG4A-204ENST00000372246 MINDY1Q8N5J2 469 aa5.35□□□□□ -1.55
ATG4A-204ENST00000372246 B3GALNT2Q8NCR0 500 aa5.35□□□□□ -1.55
ATG4A-204ENST00000372246 ITFG1Q8TB96 612 aa5.35□□□□□ -1.55
ATG4A-204ENST00000372246 TMEM40Q8WWA1 233 aa5.35□□□□□ -1.55
ATG4A-204ENST00000372246 MUL1Q969V5 352 aa5.35□□□□□ -1.55
ATG4A-204ENST00000372246 COLEC11Q9BWP8 271 aa5.35□□□□□ -1.55
ATG4A-204ENST00000372246 EMILIN2Q9BXX0 1053 aa5.35□□□□□ -1.55
ATG4A-204ENST00000372246 WDCPQ9H6R7 721 aa5.35□□□□□ -1.55
ATG4A-204ENST00000372246 NEK6Q9HC98 313 aa5.35□□□□□ -1.55
ATG4A-204ENST00000372246 TRIM39Q9HCM9 518 aa5.35□□□□□ -1.55
ATG4A-204ENST00000372246 HMG20AQ9NP66 347 aa5.35□□□□□ -1.55
ATG4A-204ENST00000372246 PALMDQ9NP74 551 aa5.35□□□□□ -1.55
ATG4A-204ENST00000372246 SARS2Q9NP81 518 aaKnown RBP5.35□□□□□ -1.55
ATG4A-204ENST00000372246 INTS10Q9NVR2 710 aaKnown RBP5.35□□□□□ -1.55
ATG4A-204ENST00000372246 COMMD8Q9NX08 183 aa5.35□□□□□ -1.55
ATG4A-204ENST00000372246 VAPAQ9P0L0 249 aa5.35□□□□□ -1.55
ATG4A-204ENST00000372246 GABRQQ9UN88 632 aa5.35□□□□□ -1.55
ATG4A-204ENST00000372246 PCDHB14Q9Y5E9 798 aa5.35□□□□□ -1.55
ATG4A-204ENST00000372246 GPR45Q9Y5Y3 372 aa5.35□□□□□ -1.55
ATG4A-204ENST00000372246 NUP214P35658 2090 aaPredicted RBP5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms