RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 PRG2P13727 222 aa14.55□□□□□ -0.08
NDC1-201ENST00000371429 KCNA5P22460 613 aa14.55□□□□□ -0.08
NDC1-201ENST00000371429 CTSOP43234 321 aaPredicted RBP14.55□□□□□ -0.08
NDC1-201ENST00000371429 USP46P62068 366 aa14.55□□□□□ -0.08
NDC1-201ENST00000371429 C16orf72Q14CZ0 275 aa14.55□□□□□ -0.08
NDC1-201ENST00000371429 CRELD2Q6UXH1 353 aaPredicted RBP14.55□□□□□ -0.08
NDC1-201ENST00000371429 KIAA2013Q8IYS2 634 aa14.55□□□□□ -0.08
NDC1-201ENST00000371429 FSTL5Q8N475 847 aaPredicted RBP14.55□□□□□ -0.08
NDC1-201ENST00000371429 SLC35B2Q8TB61 432 aa14.55□□□□□ -0.08
NDC1-201ENST00000371429 NPY6RQ99463 290 aa14.55□□□□□ -0.08
NDC1-201ENST00000371429 MKL2Q9ULH7 1088 aa14.55□□□□□ -0.08
NDC1-201ENST00000371429 HNRNPCP07910 306 aaKnown RBP eCLIP14.54□□□□□ -0.08
NDC1-201ENST00000371429 HLA-EP13747 358 aa14.54□□□□□ -0.08
NDC1-201ENST00000371429 ZIK1Q3SY52 487 aaPredicted RBP14.54□□□□□ -0.08
NDC1-201ENST00000371429 VPS26BQ4G0F5 336 aa14.54□□□□□ -0.08
NDC1-201ENST00000371429 ARMCX4Q5H9R4 360 aa14.54□□□□□ -0.08
NDC1-201ENST00000371429 TXNRD3NBQ6F5E7 133 aa14.54□□□□□ -0.08
NDC1-201ENST00000371429 TRMT10BQ6PF06 316 aaKnown RBP14.54□□□□□ -0.08
NDC1-201ENST00000371429 FBXW8Q8N3Y1 598 aa14.54□□□□□ -0.08
NDC1-201ENST00000371429 NPAS2Q99743 824 aa14.54□□□□□ -0.08
NDC1-201ENST00000371429 TBC1D10AQ9BXI6 508 aa14.54□□□□□ -0.08
NDC1-201ENST00000371429 PLIN3O60664 434 aa14.54□□□□□ -0.08
NDC1-201ENST00000371429 DLDP09622 509 aaKnown RBP14.54□□□□□ -0.08
NDC1-201ENST00000371429 SLC13A2Q13183 592 aa14.54□□□□□ -0.08
NDC1-201ENST00000371429 LARS2Q15031 903 aaKnown RBP14.54□□□□□ -0.08
NDC1-201ENST00000371429 SLC1A5Q15758 541 aa14.54□□□□□ -0.08
NDC1-201ENST00000371429 CHRNA6Q15825 494 aa14.54□□□□□ -0.08
NDC1-201ENST00000371429 SMG8Q8ND04 991 aaKnown RBP14.54□□□□□ -0.08
NDC1-201ENST00000371429 HOPXQ9BPY8 73 aaPredicted RBP14.54□□□□□ -0.08
NDC1-201ENST00000371429 ABI3Q9P2A4 366 aa14.54□□□□□ -0.08
NDC1-201ENST00000371429 DHRS12A0PJE2 317 aa14.54□□□□□ -0.08
NDC1-201ENST00000371429 PRR5-ARHGAP8B1AHC4 643 aa14.54□□□□□ -0.08
NDC1-201ENST00000371429 TNFAIP8O95379 198 aa14.54□□□□□ -0.08
NDC1-201ENST00000371429 HSD17B2P37059 387 aa14.54□□□□□ -0.08
NDC1-201ENST00000371429 ARHGAP8P85298 464 aa14.54□□□□□ -0.08
NDC1-201ENST00000371429 UAP1L1Q3KQV9 507 aa14.54□□□□□ -0.08
NDC1-201ENST00000371429 Q96MT0 163 aa14.54□□□□□ -0.08
NDC1-201ENST00000371429 DPYSL5Q9BPU6 564 aa14.54□□□□□ -0.08
NDC1-201ENST00000371429 CLN6Q9NWW5 311 aa14.54□□□□□ -0.08
NDC1-201ENST00000371429 DLG5Q8TDM6 1919 aa14.54□□□□□ -0.08
NDC1-201ENST00000371429 SRRM3A6NNA2 597 aaPredicted RBP14.54□□□□□ -0.08
NDC1-201ENST00000371429 ANKRD66B4E2M5 251 aa14.54□□□□□ -0.08
NDC1-201ENST00000371429 DLGAP3O95886 979 aa14.54□□□□□ -0.08
NDC1-201ENST00000371429 IL6P05231 212 aa14.54□□□□□ -0.08
NDC1-201ENST00000371429 ZNF8P17098 575 aaPredicted RBP14.54□□□□□ -0.08
NDC1-201ENST00000371429 CLCNKAP51800 687 aa14.54□□□□□ -0.08
NDC1-201ENST00000371429 SIRPB2Q5JXA9 342 aa14.54□□□□□ -0.08
NDC1-201ENST00000371429 NEK5Q6P3R8 708 aa14.54□□□□□ -0.08
NDC1-201ENST00000371429 GK5Q6ZS86 529 aa14.54□□□□□ -0.08
NDC1-201ENST00000371429 NET1Q7Z628 596 aaPredicted RBP14.54□□□□□ -0.08
NDC1-201ENST00000371429 HIC2Q96JB3 615 aa14.54□□□□□ -0.08
NDC1-201ENST00000371429 COPS7AQ9UBW8 275 aa14.54□□□□□ -0.08
NDC1-201ENST00000371429 IKZF3Q9UKT9 509 aa14.54□□□□□ -0.08
NDC1-201ENST00000371429 B3GALT2O43825 422 aa14.53□□□□□ -0.08
NDC1-201ENST00000371429 ZNF30P17039 623 aa14.53□□□□□ -0.08
NDC1-201ENST00000371429 DRD4P21917 467 aa14.53□□□□□ -0.08
NDC1-201ENST00000371429 CPN2P22792 545 aa14.53□□□□□ -0.08
NDC1-201ENST00000371429 PTGIRP43119 386 aa14.53□□□□□ -0.08
NDC1-201ENST00000371429 TPRG1Q6ZUI0 275 aa14.53□□□□□ -0.08
NDC1-201ENST00000371429 TEX47Q8TBZ9 253 aa14.53□□□□□ -0.08
NDC1-201ENST00000371429 ITM2CQ9NQX7 267 aa14.53□□□□□ -0.08
NDC1-201ENST00000371429 MAGEL2Q9UJ55 1249 aa14.53□□□□□ -0.08
NDC1-201ENST00000371429 CNOT6Q9ULM6 557 aaKnown RBP14.53□□□□□ -0.08
NDC1-201ENST00000371429 CNTN6Q9UQ52 1028 aa14.53□□□□□ -0.08
NDC1-201ENST00000371429 LRP6O75581 1613 aa14.53□□□□□ -0.08
NDC1-201ENST00000371429 ENO4A6NNW6 628 aa14.53□□□□□ -0.08
NDC1-201ENST00000371429 TMEM63AO94886 807 aa14.53□□□□□ -0.08
NDC1-201ENST00000371429 CLDN7O95471 211 aa14.53□□□□□ -0.08
NDC1-201ENST00000371429 TCF4P15884 667 aa14.53□□□□□ -0.08
NDC1-201ENST00000371429 PITRM1Q5JRX3 1037 aa14.53□□□□□ -0.08
NDC1-201ENST00000371429 NAPRTQ6XQN6 538 aa14.53□□□□□ -0.08
NDC1-201ENST00000371429 FAM43BQ6ZT52 329 aaPredicted RBP14.53□□□□□ -0.08
NDC1-201ENST00000371429 CCDC103Q8IW40 242 aa14.53□□□□□ -0.08
NDC1-201ENST00000371429 OR8H2Q8N162 312 aa14.53□□□□□ -0.08
NDC1-201ENST00000371429 DEPDC4Q8N2C3 294 aa14.53□□□□□ -0.08
NDC1-201ENST00000371429 VANGL1Q8TAA9 524 aaPredicted RBP14.53□□□□□ -0.08
NDC1-201ENST00000371429 GATA5Q9BWX5 397 aaPredicted RBP14.53□□□□□ -0.08
NDC1-201ENST00000371429 C12orf65Q9H3J6 166 aaKnown RBP14.53□□□□□ -0.08
NDC1-201ENST00000371429 TMEM27Q9HBJ8 222 aa14.53□□□□□ -0.08
NDC1-201ENST00000371429 COCHO43405 550 aa14.53□□□□□ -0.08
NDC1-201ENST00000371429 NIPSNAP2O75323 286 aa14.53□□□□□ -0.08
NDC1-201ENST00000371429 GPR32O75388 356 aa14.53□□□□□ -0.08
NDC1-201ENST00000371429 CNTN5O94779 1100 aa14.53□□□□□ -0.08
NDC1-201ENST00000371429 FAM171BQ6P995 826 aa14.53□□□□□ -0.08
NDC1-201ENST00000371429 PEX5LQ8IYB4 626 aa14.53□□□□□ -0.08
NDC1-201ENST00000371429 C19orf18Q8NEA5 215 aa14.53□□□□□ -0.08
NDC1-201ENST00000371429 TMEM209Q96SK2 561 aa14.53□□□□□ -0.08
NDC1-201ENST00000371429 P2RY13Q9BPV8 354 aa14.53□□□□□ -0.08
NDC1-201ENST00000371429 GSDMCQ9BYG8 508 aa14.53□□□□□ -0.08
NDC1-201ENST00000371429 MAP4K5Q9Y4K4 846 aa14.53□□□□□ -0.08
NDC1-201ENST00000371429 AHDC1Q5TGY3 1603 aaPredicted RBP14.53□□□□□ -0.08
NDC1-201ENST00000371429 KDELR3O43731 214 aa14.53□□□□□ -0.08
NDC1-201ENST00000371429 ITGA1P56199 1179 aa14.53□□□□□ -0.08
NDC1-201ENST00000371429 SOX4Q06945 474 aaPredicted RBP14.53□□□□□ -0.08
NDC1-201ENST00000371429 KLF10Q13118 480 aa14.53□□□□□ -0.08
NDC1-201ENST00000371429 TRIM71Q2Q1W2 868 aaKnown RBP14.53□□□□□ -0.08
NDC1-201ENST00000371429 UBR7Q8N806 425 aa14.53□□□□□ -0.08
NDC1-201ENST00000371429 CCDC28BQ9BUN5 200 aa14.53□□□□□ -0.08
NDC1-201ENST00000371429 PRPF19Q9UMS4 504 aaKnown RBP14.53□□□□□ -0.08
NDC1-201ENST00000371429 TRIM24O15164 1050 aa14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms