RNA–Protein interactions for RNA: ENST00000368205.7

PTPRK-202, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 662 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-202ENST00000368205 CD180Q99467 661 aa3.63□□□□□ -1.83
PTPRK-202ENST00000368205 SH3GL2Q99962 352 aa3.63□□□□□ -1.83
PTPRK-202ENST00000368205 POLR3CQ9BUI4 534 aaPredicted RBP3.63□□□□□ -1.83
PTPRK-202ENST00000368205 CARD6Q9BX69 1037 aa3.63□□□□□ -1.83
PTPRK-202ENST00000368205 SLC7A10Q9NS82 523 aa3.63□□□□□ -1.83
PTPRK-202ENST00000368205 KIF17Q9P2E2 1029 aa3.63□□□□□ -1.83
PTPRK-202ENST00000368205 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.63□□□□□ -1.83
PTPRK-202ENST00000368205 SPEF2Q9C093 1822 aa3.63□□□□□ -1.83
PTPRK-202ENST00000368205 KDM6AO15550 1401 aaPredicted RBP3.62□□□□□ -1.83
PTPRK-202ENST00000368205 IGLV5-45A0A087WSX0 123 aa3.62□□□□□ -1.83
PTPRK-202ENST00000368205 KLF18A0A0U1RQI7 1052 aa3.62□□□□□ -1.83
PTPRK-202ENST00000368205 NR5A2O00482 541 aa3.62□□□□□ -1.83
PTPRK-202ENST00000368205 PRKNO60260 465 aaPredicted RBP3.62□□□□□ -1.83
PTPRK-202ENST00000368205 SEC31AO94979 1220 aaKnown RBP3.62□□□□□ -1.83
PTPRK-202ENST00000368205 CYC1P08574 325 aa3.62□□□□□ -1.83
PTPRK-202ENST00000368205 TPM1P09493 284 aa3.62□□□□□ -1.83
PTPRK-202ENST00000368205 IFIT1P09914 478 aaKnown RBP3.62□□□□□ -1.83
PTPRK-202ENST00000368205 MARCKSP29966 332 aaPredicted RBP3.62□□□□□ -1.83
PTPRK-202ENST00000368205 CHRNB4P30926 498 aa3.62□□□□□ -1.83
PTPRK-202ENST00000368205 PIP4K2AP48426 406 aaPredicted RBP3.62□□□□□ -1.83
PTPRK-202ENST00000368205 UBASH3AP57075 661 aa3.62□□□□□ -1.83
PTPRK-202ENST00000368205 TPM4P67936 248 aa3.62□□□□□ -1.83
PTPRK-202ENST00000368205 IRX1P78414 480 aaPredicted RBP3.62□□□□□ -1.83
PTPRK-202ENST00000368205 PDE1BQ01064 536 aa3.62□□□□□ -1.83
PTPRK-202ENST00000368205 GOLGA8DPQ0D2H9 430 aa3.62□□□□□ -1.83
PTPRK-202ENST00000368205 PNOCQ13519 176 aa3.62□□□□□ -1.83
PTPRK-202ENST00000368205 ZNF234Q14588 700 aa3.62□□□□□ -1.83
PTPRK-202ENST00000368205 EIF2S3LQ2VIR3 472 aaKnown RBP3.62□□□□□ -1.83
PTPRK-202ENST00000368205 CCDC158Q5M9N0 1113 aa3.62□□□□□ -1.83
PTPRK-202ENST00000368205 GORABQ5T7V8 394 aa3.62□□□□□ -1.83
PTPRK-202ENST00000368205 RESP18Q5W5W9 173 aa3.62□□□□□ -1.83
PTPRK-202ENST00000368205 LRRC8EQ6NSJ5 796 aa3.62□□□□□ -1.83
PTPRK-202ENST00000368205 TMCO3Q6UWJ1 677 aa3.62□□□□□ -1.83
PTPRK-202ENST00000368205 MYLK4Q86YV6 388 aaPredicted RBP3.62□□□□□ -1.83
PTPRK-202ENST00000368205 AFG1LQ8WV93 481 aa3.62□□□□□ -1.83
PTPRK-202ENST00000368205 ZNF354BQ96LW1 612 aa3.62□□□□□ -1.83
PTPRK-202ENST00000368205 NEUROD6Q96NK8 337 aa3.62□□□□□ -1.83
PTPRK-202ENST00000368205 MPHOSPH8Q99549 860 aa3.62□□□□□ -1.83
PTPRK-202ENST00000368205 UTP14AQ9BVJ6 771 aaKnown RBP3.62□□□□□ -1.83
PTPRK-202ENST00000368205 PUS3Q9BZE2 481 aaKnown RBP3.62□□□□□ -1.83
PTPRK-202ENST00000368205 ZCCHC17Q9NP64 241 aaKnown RBP3.62□□□□□ -1.83
PTPRK-202ENST00000368205 MMP25Q9NPA2 562 aa3.62□□□□□ -1.83
PTPRK-202ENST00000368205 NAP1L2Q9ULW6 460 aaPredicted RBP3.62□□□□□ -1.83
PTPRK-202ENST00000368205 PPP2R2CQ9Y2T4 447 aa3.62□□□□□ -1.83
PTPRK-202ENST00000368205 ECM29Q5VYK3 1845 aa3.62□□□□□ -1.83
PTPRK-202ENST00000368205 MROH7-TTC4A0A0A0MT08 1334 aa3.62□□□□□ -1.83
PTPRK-202ENST00000368205 WDR19Q8NEZ3 1342 aa3.62□□□□□ -1.83
PTPRK-202ENST00000368205 CPDO75976 1380 aa3.62□□□□□ -1.83
PTPRK-202ENST00000368205 MYH7P12883 1935 aa3.62□□□□□ -1.83
PTPRK-202ENST00000368205 TJP1Q07157 1748 aa3.61□□□□□ -1.83
PTPRK-202ENST00000368205 TRPM3Q9HCF6 1732 aaPredicted RBP3.61□□□□□ -1.83
PTPRK-202ENST00000368205 COL18A1P39060 1754 aa3.61□□□□□ -1.83
PTPRK-202ENST00000368205 GLI3P10071 1580 aa3.61□□□□□ -1.83
PTPRK-202ENST00000368205 A0A1B0GUL7 405 aa3.61□□□□□ -1.83
PTPRK-202ENST00000368205 TMEM202A6NGA9 273 aa3.61□□□□□ -1.83
PTPRK-202ENST00000368205 ERICH4A6NGS2 130 aa3.61□□□□□ -1.83
PTPRK-202ENST00000368205 MAP2K7O14733 419 aa3.61□□□□□ -1.83
PTPRK-202ENST00000368205 POLR3GO15318 223 aaPredicted RBP3.61□□□□□ -1.83
PTPRK-202ENST00000368205 ZSCAN12O43309 604 aa3.61□□□□□ -1.83
PTPRK-202ENST00000368205 CIAO1O76071 339 aa3.61□□□□□ -1.83
PTPRK-202ENST00000368205 ZNF18P17022 549 aa3.61□□□□□ -1.83
PTPRK-202ENST00000368205 ADORA1P30542 326 aa3.61□□□□□ -1.83
PTPRK-202ENST00000368205 CASQ1P31415 396 aa3.61□□□□□ -1.83
PTPRK-202ENST00000368205 SYKP43405 635 aa3.61□□□□□ -1.83
PTPRK-202ENST00000368205 METAP2P50579 478 aaKnown RBP eCLIP3.61□□□□□ -1.83
PTPRK-202ENST00000368205 TBX4P57082 545 aa3.61□□□□□ -1.83
PTPRK-202ENST00000368205 DSCR10P59022 87 aa3.61□□□□□ -1.83
PTPRK-202ENST00000368205 HAND2P61296 217 aa3.61□□□□□ -1.83
PTPRK-202ENST00000368205 MYL5Q02045 173 aa3.61□□□□□ -1.83
PTPRK-202ENST00000368205 GRIK3Q13003 919 aa3.61□□□□□ -1.83
PTPRK-202ENST00000368205 WDR38Q5JTN6 314 aa3.61□□□□□ -1.83
PTPRK-202ENST00000368205 STPG4Q8N801 248 aa3.61□□□□□ -1.83
PTPRK-202ENST00000368205 TC2NQ8N9U0 490 aa3.61□□□□□ -1.83
PTPRK-202ENST00000368205 USP38Q8NB14 1042 aa3.61□□□□□ -1.83
PTPRK-202ENST00000368205 MNS1Q8NEH6 495 aa3.61□□□□□ -1.83
PTPRK-202ENST00000368205 WDR20Q8TBZ3 569 aa3.61□□□□□ -1.83
PTPRK-202ENST00000368205 SMARCE1Q969G3 411 aa3.61□□□□□ -1.83
PTPRK-202ENST00000368205 NEURL2Q9BR09 285 aa3.61□□□□□ -1.83
PTPRK-202ENST00000368205 FUT8Q9BYC5 575 aa3.61□□□□□ -1.83
PTPRK-202ENST00000368205 PARD6BQ9BYG5 372 aa3.61□□□□□ -1.83
PTPRK-202ENST00000368205 ZNF700Q9H0M5 742 aa3.61□□□□□ -1.83
PTPRK-202ENST00000368205 MROH8Q9H579 483 aa3.61□□□□□ -1.83
PTPRK-202ENST00000368205 MAGEE1Q9HCI5 957 aa3.61□□□□□ -1.83
PTPRK-202ENST00000368205 BEX4Q9NWD9 120 aaPredicted RBP3.61□□□□□ -1.83
PTPRK-202ENST00000368205 ALKBH4Q9NXW9 302 aa3.61□□□□□ -1.83
PTPRK-202ENST00000368205 PSD3Q9NYI0 1048 aa3.61□□□□□ -1.83
PTPRK-202ENST00000368205 MAN1B1Q9UKM7 699 aa3.61□□□□□ -1.83
PTPRK-202ENST00000368205 LOXL2Q9Y4K0 774 aa3.61□□□□□ -1.83
PTPRK-202ENST00000368205 AKAP11Q9UKA4 1901 aa3.61□□□□□ -1.83
PTPRK-202ENST00000368205 NUP188Q5SRE5 1749 aa3.61□□□□□ -1.83
PTPRK-202ENST00000368205 MYO5AQ9Y4I1 1855 aaKnown RBP3.6□□□□□ -1.83
PTPRK-202ENST00000368205 HHLA1C9JL84 531 aa3.6□□□□□ -1.83
PTPRK-202ENST00000368205 H3BQF6 201 aa3.6□□□□□ -1.83
PTPRK-202ENST00000368205 PEX12O00623 359 aa3.6□□□□□ -1.83
PTPRK-202ENST00000368205 SH2B2O14492 632 aaPredicted RBP3.6□□□□□ -1.83
PTPRK-202ENST00000368205 BCAT2O15382 392 aaPredicted RBP3.6□□□□□ -1.83
PTPRK-202ENST00000368205 SYNGR3O43761 229 aa3.6□□□□□ -1.83
PTPRK-202ENST00000368205 STX10O60499 249 aa3.6□□□□□ -1.83
PTPRK-202ENST00000368205 ZFYP08048 801 aaPredicted RBP3.6□□□□□ -1.83
PTPRK-202ENST00000368205 CNPP09543 421 aaKnown RBP3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms