RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 TXN2Q99757 166 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 AGPAT5Q9NUQ2 364 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 ZMPSTE24O75844 475 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 GAAP10253 952 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 NAMPTP43490 491 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 PPT1P50897 306 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 PPP3CAQ08209 521 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 GPS1Q13098 491 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 ULK3Q6PHR2 472 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 CDK20Q8IZL9 346 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 LRRC57Q8N9N7 239 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 OR2T11Q8NH01 316 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 GIMAP5Q96F15 307 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 ISCA1Q9BUE6 129 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 C19orf81C9J6K1 198 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 NFKB2Q00653 900 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 KCTD20Q7Z5Y7 419 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 INTS7Q9NVH2 962 aaKnown RBP3.72□□□□□ -1.81
SYNE1-207ENST00000367255 ASB14A6NK59 587 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 RPP14O95059 124 aaKnown RBP3.72□□□□□ -1.81
SYNE1-207ENST00000367255 GPSM2P81274 684 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 PFKFB4Q16877 469 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 ZNF667Q5HYK9 610 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 ARHGAP11AQ6P4F7 1023 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 OR2AP1Q8NGE2 309 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 CARS2Q9HA77 564 aaKnown RBP3.72□□□□□ -1.81
SYNE1-207ENST00000367255 ZNF334Q9HCZ1 680 aaPredicted RBP3.72□□□□□ -1.81
SYNE1-207ENST00000367255 SLC39A10Q9ULF5 831 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 HEG1Q9ULI3 1381 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 A0A087X0B3 334 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 USP17L3A6NCW0 530 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 USP17L4A6NCW7 530 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 SLC33A1O00400 549 aaPredicted RBP3.72□□□□□ -1.81
SYNE1-207ENST00000367255 PGK1P00558 417 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 EGFP01133 1207 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 PTPN6P29350 595 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 THBS3P49746 956 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 NEK3P51956 506 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 UBE2MP61081 183 aaKnown RBP3.72□□□□□ -1.81
SYNE1-207ENST00000367255 USP17L1Q7RTZ2 530 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 GID4Q8IVV7 300 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 LSMEM2Q8N112 164 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 POU5F2Q8N7G0 328 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 NSUN4Q96CB9 384 aaKnown RBP3.72□□□□□ -1.81
SYNE1-207ENST00000367255 GSDMCQ9BYG8 508 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 MED28Q9H204 178 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 HOXC10Q9NYD6 342 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 NUMBLQ9Y6R0 609 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 FAM95CA0A1B0GW59 222 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 VAMP7P51809 220 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 IL25Q9H293 177 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 QTRT2Q9H974 415 aaKnown RBP3.72□□□□□ -1.81
SYNE1-207ENST00000367255 XPR1Q9UBH6 696 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 PPM1HQ9ULR3 514 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 KCNIP3Q9Y2W7 256 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 SPO11Q9Y5K1 396 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 RNASEH2AO75792 299 aaKnown RBP3.72□□□□□ -1.81
SYNE1-207ENST00000367255 PRPS2P11908 318 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 HLA-DPA1P20036 260 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 SLC2A7Q6PXP3 512 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 C11orf65Q8NCR3 313 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 OR10A6Q8NH74 314 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 RIPOR3Q96MK2 946 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 ZNF471Q9BX82 626 aaPredicted RBP3.72□□□□□ -1.81
SYNE1-207ENST00000367255 KCNH4Q9UQ05 1017 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 ANGPT4Q9Y264 503 aa3.72□□□□□ -1.81
SYNE1-207ENST00000367255 H7C0C1 242 aa3.71□□□□□ -1.81
SYNE1-207ENST00000367255 FUCA1P04066 466 aa3.71□□□□□ -1.81
SYNE1-207ENST00000367255 F7P08709 466 aaPredicted RBP3.71□□□□□ -1.81
SYNE1-207ENST00000367255 HSD17B1P14061 328 aa3.71□□□□□ -1.81
SYNE1-207ENST00000367255 ARSEP51690 589 aa3.71□□□□□ -1.81
SYNE1-207ENST00000367255 FNBP1LQ5T0N5 605 aa3.71□□□□□ -1.81
SYNE1-207ENST00000367255 UBAP2Q5T6F2 1119 aaKnown RBP3.71□□□□□ -1.81
SYNE1-207ENST00000367255 DCUN1D5Q9BTE7 237 aa3.71□□□□□ -1.81
SYNE1-207ENST00000367255 CASS4Q9NQ75 786 aa3.71□□□□□ -1.81
SYNE1-207ENST00000367255 SNX6Q9UNH7 406 aa3.71□□□□□ -1.81
SYNE1-207ENST00000367255 JUNBP17275 347 aaPredicted RBP3.71□□□□□ -1.81
SYNE1-207ENST00000367255 TMEM79Q9BSE2 394 aa3.71□□□□□ -1.81
SYNE1-207ENST00000367255 LRRC4BQ9NT99 713 aa3.71□□□□□ -1.81
SYNE1-207ENST00000367255 EXOSC1Q9Y3B2 195 aaKnown RBP3.71□□□□□ -1.81
SYNE1-207ENST00000367255 CD163L1Q9NR16 1453 aa3.71□□□□□ -1.81
SYNE1-207ENST00000367255 H7C1Q1 480 aa3.71□□□□□ -1.81
SYNE1-207ENST00000367255 CILPO75339 1184 aa3.71□□□□□ -1.81
SYNE1-207ENST00000367255 GPC3P51654 580 aa3.71□□□□□ -1.81
SYNE1-207ENST00000367255 MAP2K6P52564 334 aa3.71□□□□□ -1.81
SYNE1-207ENST00000367255 PPP2R2BQ00005 443 aa3.71□□□□□ -1.81
SYNE1-207ENST00000367255 DOC2AQ14183 400 aa3.71□□□□□ -1.81
SYNE1-207ENST00000367255 TCTE1Q5JU00 501 aa3.71□□□□□ -1.81
SYNE1-207ENST00000367255 WDR45BQ5MNZ6 344 aa3.71□□□□□ -1.81
SYNE1-207ENST00000367255 FAM102BQ5T8I3 360 aa3.71□□□□□ -1.81
SYNE1-207ENST00000367255 SERPINA13PQ6UXR4 307 aa3.71□□□□□ -1.81
SYNE1-207ENST00000367255 FAM126BQ8IXS8 530 aa3.71□□□□□ -1.81
SYNE1-207ENST00000367255 METTL13Q8N6R0 699 aa3.71□□□□□ -1.81
SYNE1-207ENST00000367255 PLD5Q8N7P1 536 aa3.71□□□□□ -1.81
SYNE1-207ENST00000367255 MIR1-1HGQ9H1L0 117 aa3.71□□□□□ -1.81
SYNE1-207ENST00000367255 SLC23A1Q9UHI7 598 aa3.71□□□□□ -1.81
SYNE1-207ENST00000367255 CLDN24A6NM45 220 aa3.71□□□□□ -1.81
SYNE1-207ENST00000367255 SOCS7O14512 581 aa3.71□□□□□ -1.81
SYNE1-207ENST00000367255 ADH6P28332 368 aa3.71□□□□□ -1.81
SYNE1-207ENST00000367255 OASLQ15646 514 aaKnown RBP3.71□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms