RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 SNX4O95219 450 aa8.55□□□□□ -1.04
SYNE1-206ENST00000367253 DHFRP00374 187 aa8.55□□□□□ -1.04
SYNE1-206ENST00000367253 FGRP09769 529 aa8.55□□□□□ -1.04
SYNE1-206ENST00000367253 SLC35G6P0C7Q6 338 aa8.55□□□□□ -1.04
SYNE1-206ENST00000367253 DRD4P21917 467 aa8.55□□□□□ -1.04
SYNE1-206ENST00000367253 TNFRSF8P28908 595 aa8.55□□□□□ -1.04
SYNE1-206ENST00000367253 TM4SF1P30408 202 aa8.55□□□□□ -1.04
SYNE1-206ENST00000367253 ACSL1P33121 698 aa8.55□□□□□ -1.04
SYNE1-206ENST00000367253 RXRGP48443 463 aa8.55□□□□□ -1.04
SYNE1-206ENST00000367253 GPR15P49685 360 aa8.55□□□□□ -1.04
SYNE1-206ENST00000367253 NEK3P51956 506 aa8.55□□□□□ -1.04
SYNE1-206ENST00000367253 ERVK-25P63136 954 aa8.55□□□□□ -1.04
SYNE1-206ENST00000367253 SMAD4Q13485 552 aaKnown RBP8.55□□□□□ -1.04
SYNE1-206ENST00000367253 BLMHQ13867 455 aa8.55□□□□□ -1.04
SYNE1-206ENST00000367253 PIK3R6Q5UE93 754 aa8.55□□□□□ -1.04
SYNE1-206ENST00000367253 HAGHLQ6PII5 290 aaPredicted RBP8.55□□□□□ -1.04
SYNE1-206ENST00000367253 PIWIL4Q7Z3Z4 852 aaKnown RBP8.55□□□□□ -1.04
SYNE1-206ENST00000367253 R3HCC1LQ7Z5L2 792 aaKnown RBP8.55□□□□□ -1.04
SYNE1-206ENST00000367253 TMC3Q7Z5M5 1100 aa8.55□□□□□ -1.04
SYNE1-206ENST00000367253 C8orf59Q8N0T1 100 aaPredicted RBP8.55□□□□□ -1.04
SYNE1-206ENST00000367253 EPS8L3Q8TE67 593 aaKnown RBP8.55□□□□□ -1.04
SYNE1-206ENST00000367253 FAM163AQ96GL9 167 aaPredicted RBP8.55□□□□□ -1.04
SYNE1-206ENST00000367253 PRICKLE1Q96MT3 831 aaPredicted RBP8.55□□□□□ -1.04
SYNE1-206ENST00000367253 SEPHS2Q99611 448 aa8.55□□□□□ -1.04
SYNE1-206ENST00000367253 CMKLR1Q99788 373 aa8.55□□□□□ -1.04
SYNE1-206ENST00000367253 CLSTN3Q9BQT9 956 aa8.55□□□□□ -1.04
SYNE1-206ENST00000367253 ERVK-6Q9BXR3 956 aa8.55□□□□□ -1.04
SYNE1-206ENST00000367253 ADAMTS10Q9H324 1103 aa8.55□□□□□ -1.04
SYNE1-206ENST00000367253 GOLPH3Q9H4A6 298 aa8.55□□□□□ -1.04
SYNE1-206ENST00000367253 TIGARQ9NQ88 270 aa8.55□□□□□ -1.04
SYNE1-206ENST00000367253 THSD1Q9NS62 852 aa8.55□□□□□ -1.04
SYNE1-206ENST00000367253 RBM22Q9NW64 420 aaKnown RBP eCLIP8.55□□□□□ -1.04
SYNE1-206ENST00000367253 WHRNQ9P202 907 aa8.55□□□□□ -1.04
SYNE1-206ENST00000367253 ERVK-18Q9QC07 812 aa8.55□□□□□ -1.04
SYNE1-206ENST00000367253 A0A1W2PQ45 241 aaPredicted RBP8.55□□□□□ -1.04
SYNE1-206ENST00000367253 A0A1W2PQY0 241 aa8.55□□□□□ -1.04
SYNE1-206ENST00000367253 TXNL1O43396 289 aa8.55□□□□□ -1.04
SYNE1-206ENST00000367253 PSMG1O95456 288 aa8.55□□□□□ -1.04
SYNE1-206ENST00000367253 SERPINA1P01009 418 aa8.55□□□□□ -1.04
SYNE1-206ENST00000367253 PAEPP09466 180 aa8.55□□□□□ -1.04
SYNE1-206ENST00000367253 YAP1P46937 504 aaKnown RBP8.55□□□□□ -1.04
SYNE1-206ENST00000367253 TDGQ13569 410 aa8.55□□□□□ -1.04
SYNE1-206ENST00000367253 DSC3Q14574 896 aa8.55□□□□□ -1.04
SYNE1-206ENST00000367253 NAB2Q15742 525 aa8.55□□□□□ -1.04
SYNE1-206ENST00000367253 GRIK5Q16478 980 aa8.55□□□□□ -1.04
SYNE1-206ENST00000367253 SLC39A5Q6ZMH5 540 aa8.55□□□□□ -1.04
SYNE1-206ENST00000367253 ZDHHC13Q8IUH4 622 aa8.55□□□□□ -1.04
SYNE1-206ENST00000367253 SFRP1Q8N474 314 aa8.55□□□□□ -1.04
SYNE1-206ENST00000367253 ANKRD53Q8N9V6 530 aa8.55□□□□□ -1.04
SYNE1-206ENST00000367253 CLEC1AQ8NC01 280 aa8.55□□□□□ -1.04
SYNE1-206ENST00000367253 RP9Q8TA86 221 aaKnown RBP8.55□□□□□ -1.04
SYNE1-206ENST00000367253 ATXN2LQ8WWM7 1075 aaKnown RBP8.55□□□□□ -1.04
SYNE1-206ENST00000367253 BRI3BPQ8WY22 251 aa8.55□□□□□ -1.04
SYNE1-206ENST00000367253 ZNF669Q96BR6 464 aaPredicted RBP8.55□□□□□ -1.04
SYNE1-206ENST00000367253 TMEM176AQ96HP8 235 aa8.55□□□□□ -1.04
SYNE1-206ENST00000367253 IFT22Q9H7X7 185 aa8.55□□□□□ -1.04
SYNE1-206ENST00000367253 SAR1AQ9NR31 198 aa8.55□□□□□ -1.04
SYNE1-206ENST00000367253 TRMT13Q9NUP7 481 aaKnown RBP8.55□□□□□ -1.04
SYNE1-206ENST00000367253 SH3BP4Q9P0V3 963 aa8.55□□□□□ -1.04
SYNE1-206ENST00000367253 PCDHGC5Q9Y5F6 944 aa8.55□□□□□ -1.04
SYNE1-206ENST00000367253 TNPO3Q9Y5L0 923 aaKnown RBP8.55□□□□□ -1.04
SYNE1-206ENST00000367253 FAM227AF5H4B4 570 aa8.54□□□□□ -1.04
SYNE1-206ENST00000367253 TRDMT1O14717 391 aaKnown RBP8.54□□□□□ -1.04
SYNE1-206ENST00000367253 DHX15O43143 795 aaKnown RBP8.54□□□□□ -1.04
SYNE1-206ENST00000367253 SLC28A2O43868 658 aa8.54□□□□□ -1.04
SYNE1-206ENST00000367253 POP4O95707 220 aaKnown RBP8.54□□□□□ -1.04
SYNE1-206ENST00000367253 BMPR1AP36894 532 aa8.54□□□□□ -1.04
SYNE1-206ENST00000367253 COILP38432 576 aaPredicted RBP8.54□□□□□ -1.04
SYNE1-206ENST00000367253 DUSP4Q13115 394 aa8.54□□□□□ -1.04
SYNE1-206ENST00000367253 GRB14Q14449 540 aa8.54□□□□□ -1.04
SYNE1-206ENST00000367253 SF1Q15637 639 aaKnown RBP8.54□□□□□ -1.04
SYNE1-206ENST00000367253 PCID2Q5JVF3 399 aa8.54□□□□□ -1.04
SYNE1-206ENST00000367253 SLC2A7Q6PXP3 512 aa8.54□□□□□ -1.04
SYNE1-206ENST00000367253 C10orf107Q8IVU9 208 aa8.54□□□□□ -1.04
SYNE1-206ENST00000367253 PLD6Q8N2A8 252 aaKnown RBP8.54□□□□□ -1.04
SYNE1-206ENST00000367253 UGT2B28Q9BY64 529 aa8.54□□□□□ -1.04
SYNE1-206ENST00000367253 DLGAP4Q9Y2H0 992 aa8.54□□□□□ -1.04
SYNE1-206ENST00000367253 ATP6V1G2-DDX39BF2Z307 99 aa8.54□□□□□ -1.04
SYNE1-206ENST00000367253 PLD2O14939 933 aa8.54□□□□□ -1.04
SYNE1-206ENST00000367253 CD3EAPO15446 510 aaKnown RBP8.54□□□□□ -1.04
SYNE1-206ENST00000367253 AP2A2O94973 939 aa8.54□□□□□ -1.04
SYNE1-206ENST00000367253 APOC1P02654 83 aa8.54□□□□□ -1.04
SYNE1-206ENST00000367253 TCF4P15884 667 aa8.54□□□□□ -1.04
SYNE1-206ENST00000367253 ZNF12P17014 697 aa8.54□□□□□ -1.04
SYNE1-206ENST00000367253 ADSSP30520 456 aa8.54□□□□□ -1.04
SYNE1-206ENST00000367253 SHMT1P34896 483 aa8.54□□□□□ -1.04
SYNE1-206ENST00000367253 OMPP47874 163 aa8.54□□□□□ -1.04
SYNE1-206ENST00000367253 NIPAL4Q0D2K0 466 aa8.54□□□□□ -1.04
SYNE1-206ENST00000367253 RIN1Q13671 783 aa8.54□□□□□ -1.04
SYNE1-206ENST00000367253 ABHD17BQ5VST6 288 aa8.54□□□□□ -1.04
SYNE1-206ENST00000367253 PLET1Q6UQ28 207 aa8.54□□□□□ -1.04
SYNE1-206ENST00000367253 RAD9BQ6WBX8 426 aa8.54□□□□□ -1.04
SYNE1-206ENST00000367253 C15orf52Q6ZUT6 534 aaKnown RBP8.54□□□□□ -1.04
SYNE1-206ENST00000367253 PRICKLE2Q7Z3G6 844 aa8.54□□□□□ -1.04
SYNE1-206ENST00000367253 TTLQ8NG68 377 aa8.54□□□□□ -1.04
SYNE1-206ENST00000367253 CASKIN2Q8WXE0 1202 aa8.54□□□□□ -1.04
SYNE1-206ENST00000367253 ANKS1AQ92625 1134 aa8.54□□□□□ -1.04
SYNE1-206ENST00000367253 MYDGFQ969H8 173 aa8.54□□□□□ -1.04
SYNE1-206ENST00000367253 ZYG11BQ9C0D3 744 aa8.54□□□□□ -1.04
SYNE1-206ENST00000367253 GRIN2DO15399 1336 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms